prot_P-canaliculata_contig974.23825.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig974.23825.1
Unique Nameprot_P-canaliculata_contig974.23825.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length536
Homology
BLAST of mRNA_P-canaliculata_contig974.23825.1 vs. uniprot
Match: A0A6H5JV51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV51_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 3.030e-51
Identity = 219/665 (32.93%), Postives = 284/665 (42.71%), Query Frame = 0
Query:   25 DEAAAVTSAVPAAREFAAKMEELASVAPGLSALLVVVTGTLGEAA---HFTPTTGEPVARGQGMEVPRTQSVDACNGLHEILKVVLPTLAQLLSFDHLRASPSVARNLVHALANLYVRVGRAAADNVDDGVSQREGHGSARSSPEGTSSRS---HKSPESSLGSLEPPSTDGSGS---------------------------MNISG------NNKLQRERMGKKTESWVSSILTQAFAPKVYGGRTVRSSGLDALLGENGVDSAEHHRAVQAEILHNTLALQDLAAEGL-AFRRGRRREAGWG-------------------------IEDQEDSREI---LFETC----------LKAFGSVLRTGEDEDG-----------------------EAPAMQLLLARLREDSYRLLAGREIGWEAGDGEIKRPRETLPEG---------APLQGGD---------CL----------------------RDQQATLPISPSTWSQSIAASSSGTRRKHPGSY------------LP-PPTRKRRSFLRPXXXXXXXXXXXXREWESHVRDCLAALKHRPFLCPDELLRSTGAVPSLVPEAYT--GEAWRRTPSTVDRVSD-----GFRLSDVCLLLALDVLEEAVLEEGGGEAEAGLLRALRTPR 528
            +E+ A+ +A+P A+EFA KM ELASV PGLS  LV +T      +   H TP+      RG G+  PR+ S D  + + E++KV  P LA+LLSF+HLRAS S  R+LV AL NLYV V    +  +   V Q    GS+ +S    SSR    HK P  + GS  P S     S                           M++SG      +    RE++ KK  SWV+SIL QA APKVYGG+ VRS GLD LLG  GV +A H RAVQAE+L +T  L  L AE L + R+  +R  G                           ++ +  SR+     F +           ++   +++  G  +                         EA A    L R   D        ++G   G    + P E L E          AP+ GG          CL                      R+    +P S    S S+AAS++  +   P               LP PPT    S L P             EWE  V+ CL+ LK RP  CPD LLR+TGAVPSL  E     G A      +VD         GF LS+ CLL+ L+V+EEAVL  GG EA AGLLRA RT R
Sbjct:   85 EESPAMAAALPPAQEFADKMVELASVVPGLSRSLVELTAATTSTSVDGHSTPSADTAGKRG-GLAQPRSSSADF-DYVQEVIKVAPPVLARLLSFEHLRASESTGRDLVQALVNLYVGV---RSPGLGSAVFQAS-RGSSATSLLPASSRDSCLHKPPAPAAGSSTPSSAGSHASSRARMSASVDTSTAPSTVSPAGTIGATMSVSGVRATSISQAHHREKLAKKAASWVASILKQAVAPKVYGGKLVRSKGLDELLGRRGVTAAHHDRAVQAELLKSTEVLLGLTAEDLHSKRKTNKRSIGLSNRGVPSAYIPNKSHININSMNNNESVQQERPSRKRPRPAFTSASSRATPKASPVRLGATMIMAGARQQSLGAGTPHCCANPTHNTSAPGFPVEAGARTSRLFRDEGDFLLEACEEDMGLRLGSARTESPSELLLEHTVRVLSVMLAPMGGGSQLPSQLLHSCLQQNAYHLLGGPICSGKASSQVGREPPLLIPNSDHRGSASLAASAAPKQLMSPEKQQGRQEFRSGLQPLPLPPT----SLLLPKDHSSALS-----EWEERVQGCLSTLKSRPLRCPDALLRATGAVPSLHSEVCVRGGMARESRSVSVDAAKGRNSTRGFALSEACLLVGLNVVEEAVLGTGG-EAAAGLLRAFRTVR 733          
BLAST of mRNA_P-canaliculata_contig974.23825.1 vs. uniprot
Match: D7FWC0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWC0_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 3.110e-37
Identity = 183/637 (28.73%), Postives = 236/637 (37.05%), Query Frame = 0
Query:   25 DEAAAVTSAVPAAREFAAKMEELASVAPGLSALLVVVTGTLGEAA---HFTPTTGEPVARGQGMEVPRTQSVDACNGLHEILKVVLPTLAQLLSFDHLRASPSVARNLVHALANLYVRVGRAAADNVDDGVSQREGHGSARSSPEGTSSRSHKSPESSLGSLEPPSTDGSGSMNISGNNKLQRERMGKKTESWVSSILTQAFAPKVYGGRTVRSSGLDALLGENGVDSAEHHRAVQAEILHNTLALQDLAAEGLAFRRGRRREAGWGIEDQ-----------------------------------------------------------------------------------------------------EDSREILFETCLKAFGSVLRTGEDED----------------------GEAPAMQLLLARLREDSYRLLAGREIGWEAGDGEIKRPRETLPEGAPLQGGDCLRDQQATLPISPSTWSQSIAASSSGTRRKHPGSYLPPPTRKRRSFLRPXXXXXXXXXXXXREWESHVRDCLAALKHRPFLCPDELLRSTGAVPSLVPEAYT--GEAWRRTPSTVDRVSD-----GFRLSDVCLLLALDVLEEAVLEEGGGEAEAGLLRALRTPR 528
            +E+ A+ +A+P A+EFA KM ELASV PGLS  LV +T      +   H TP+  +   +G G+  P   S D  + + E++KV  P LA+LLSF+HLRAS +  R+LV AL NLYV V             +  G GSA S                                                              +VYGG+ VRS GLD LLG  GV +A H RAVQAE+L NT  L  L AEGL  +R +  +   G+ DQ                                                                                                      D    L E C +  G  LR+ + E                       G     QLL A L++D+Y LLAG     +A     + P   +P            D + +  +S S   Q + +      R+   S + P      S L P             EWE  V+ CL+ L+ RP LCPD LLR+TGA PSL  E     G A      +VD         GF LS+ CL + LDV+EEAVL  GG EA AGLLRA RT R
Sbjct:  174 EESPAMAAALPLAQEFADKMVELASVVPGLSRSLVELTAATTSTSVDGHSTPS-ADTAGKGGGLTQPPLPSADF-DYVQEVIKVAPPVLARLLSFEHLRASETTGRDLVQALVNLYVGV-------------RSPGLGSAVS--------------------------------------------------------------QVYGGKLVRSKGLDELLGRRGVTAAHHDRAVQAELLKNTEVLLGLTAEGLRSKR-KANKRSIGLSDQCVPSAYIPNNKSHINISSINNNGSGPQERPSRKRPRPAFTSASSRATPKASPARLGATMTTAGAGQQSLAAGTPDCCVNPTHNTSVPGFPVEAGAGTSRLFRDEGGFLLEACEEDMGLGLRSPKTEGPPELLLEHTVRALSAMLVPMGGGSQLPSQLLHACLQQDAYHLLAGPIRSGKASSQVGREPPFLIPNN----------DHRGSASLSASAAPQQLMSPEKQQGRQEFRSGVQPLPLPPASLLLPKDHSPALS-----EWEERVQGCLSTLESRPLLCPDALLRATGAAPSLPSEVCVRGGMAREGRSVSVDAAKGRNNNRGFPLSEACLFVGLDVVEEAVLGRGG-EAAAGLLRAFRTVR 716          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig974.23825.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JV51_9PHAE3.030e-5132.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWC0_ECTSI3.110e-3728.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig974contigP-canaliculata_contig974:21707..25699 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig974.23825.1mRNA_P-canaliculata_contig974.23825.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig974 21707..25699 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig974.23825.1 ID=prot_P-canaliculata_contig974.23825.1|Name=mRNA_P-canaliculata_contig974.23825.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=536bp
MLRIREGSGATSPIAVGESANNSEDEAAAVTSAVPAAREFAAKMEELASV
APGLSALLVVVTGTLGEAAHFTPTTGEPVARGQGMEVPRTQSVDACNGLH
EILKVVLPTLAQLLSFDHLRASPSVARNLVHALANLYVRVGRAAADNVDD
GVSQREGHGSARSSPEGTSSRSHKSPESSLGSLEPPSTDGSGSMNISGNN
KLQRERMGKKTESWVSSILTQAFAPKVYGGRTVRSSGLDALLGENGVDSA
EHHRAVQAEILHNTLALQDLAAEGLAFRRGRRREAGWGIEDQEDSREILF
ETCLKAFGSVLRTGEDEDGEAPAMQLLLARLREDSYRLLAGREIGWEAGD
GEIKRPRETLPEGAPLQGGDCLRDQQATLPISPSTWSQSIAASSSGTRRK
HPGSYLPPPTRKRRSFLRPFLGPFPAPHPLPREWESHVRDCLAALKHRPF
LCPDELLRSTGAVPSLVPEAYTGEAWRRTPSTVDRVSDGFRLSDVCLLLA
LDVLEEAVLEEGGGEAEAGLLRALRTPRIAGVEAEA
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