prot_P-canaliculata_contig97265.23811.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig97265.23811.1
Unique Nameprot_P-canaliculata_contig97265.23811.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length238
Homology
BLAST of mRNA_P-canaliculata_contig97265.23811.1 vs. uniprot
Match: UPI001673398F (type II secretion system minor pseudopilin GspK n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI001673398F)

HSP 1 Score: 311 bits (797), Expect = 3.850e-103
Identity = 163/240 (67.92%), Postives = 196/240 (81.67%), Query Frame = 0
Query:    1 MSRSSQKDRGTVLLTTLLIMTVMAAITVALMDDIQLSVKRTINVQAYAQADWQADGAEDFVTAYLQNDFAALAPEAKAVLLGAKVPQILPTPTGSITLTLKDASQCFNLNAVVNEAGVRDDAAWREFAQLGQLLGLAENQATSLSSALVDWQDADQQQSTGGAEDGTYLRKNPPYRTADTALRGPEELRAIDGMDEDLWELFRPFVCTG---GIGVLPQ-INVNSLTGERLLVLASALSG 236
            M+R S+ ++GTVLLTTLLIM VMAA+TVALM+DI+ +VKRTINV AYAQADWQA GAEDF+ AYLQNDF  L P AKAVLL ++ P ILPTP G+ITL LKDAS CFNL+ VV +AG ++  A  EF+ + QLLGL  NQA +L+S L+DWQD DQQ  +GGAEDGTYLR+NPPYRTADTA+R PEE+RA++GMDEDLWELF+PFVCTG   G G   Q IN+NSL  ERL++LA+AL+G
Sbjct:    1 MTRKSKSEQGTVLLTTLLIMAVMAALTVALMEDIRFAVKRTINVNAYAQADWQAGGAEDFIAAYLQNDFRELDPAAKAVLLQSRTPLILPTPEGAITLILKDASHCFNLSHVVTDAGEQNSVAAAEFSNVAQLLGLPPNQAIALASTLIDWQDKDQQMRSGGAEDGTYLRRNPPYRTADTAMRSPEEMRALNGMDEDLWELFKPFVCTGPTKGEGQQSQSININSLPPERLILLAAALAG 240          
BLAST of mRNA_P-canaliculata_contig97265.23811.1 vs. uniprot
Match: UPI0004184FE1 (type II secretion system minor pseudopilin GspK n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI0004184FE1)

HSP 1 Score: 198 bits (503), Expect = 7.920e-59
Identity = 109/238 (45.80%), Postives = 153/238 (64.29%), Query Frame = 0
Query:    3 RSSQKDRGTVLLTTLLIMTVMAAITVALMDDIQLSVKRTINVQAYAQADWQADGAEDFVTAYLQNDFAALAPEAKAVLLGAKVPQILPTPT--GSITLTLKDASQCFNLNAVVNEAGVRDDAAWREFAQLGQLLGLAENQATSLSSALVDWQDADQQQSTGGAEDGTYLRKNPPYRTADTALRGPEELRAIDGMDEDLWELFRPFVCTGGIGVLPQINVNSLTGERLLVLASALSGEE 238
            R   K+RGTVLLTTLLIM VMAA++VA+MDDI+ +VKRTINV  YAQADW   GAEDF  +Y+ +    + P  K  L   K PQ    P   G + L ++D + CF L ++VN +G  +    R+F  L   LG  +N A SL++AL DW D+D Q+S+ GAEDG YLR++PP+RTA+TAL    ELR+++GM E+L++  RPF+C    G   ++N+++       +L++ L G E
Sbjct:    2 RHQDKERGTVLLTTLLIMAVMAAVSVAIMDDIRFAVKRTINVGDYAQADWYVKGAEDFAESYISSQLGPMQPAVKNELF--KTPQTFTFPYDGGMMILDVRDGTDCFALGSLVNSSGAANVVGGRQFTNLLIALGWPDNDARSLTAALTDWIDSDSQRSSNGAEDGDYLRRDPPHRTANTALTSVMELRSLEGMTEELYQSIRPFLCARKSGETAKLNIDTAEPIDAFLLSTILGGPE 237          
BLAST of mRNA_P-canaliculata_contig97265.23811.1 vs. uniprot
Match: A0A420WE48_9PROT (Type II secretion system protein K (GspK) n=1 Tax=Litorimonas taeanensis TaxID=568099 RepID=A0A420WE48_9PROT)

HSP 1 Score: 178 bits (452), Expect = 7.530e-51
Identity = 102/236 (43.22%), Postives = 148/236 (62.71%), Query Frame = 0
Query:    4 SSQKDRGTVLLTTLLIMTVMAAITVALMDDIQLSVKRTINVQAYAQADWQADGAEDFVTAYLQNDFAALAPEAKAVLLGAKVPQILPTPTGSITLTLKDASQCFNLNAVVN-EAGVRDDAAWREFAQLGQLLGLAENQATSLSSALVDWQDADQQQSTGGAEDGTYLRKNPPYRTADTALRGPEELRAIDGMDEDLWELFRPFVCTGGIGVLPQINVNSLTGERLLVLASALSGEE 238
            ++  + G VLLTTLLIM +MAA+ VALMDD++L++KRT NV  YAQADW   GAED+V   L      +  E +  +L +  P ILP   G++ L ++D S CFNLN++ + E    +  A  +F QL ++LG+   Q+T +S+ ++DW D+D Q   GGAEDG YLR+ PP  TA+T L    ELRAI+G+  +++E  RP+VC G    +   NV+S    +  +LA+ L G+E
Sbjct:   13 TADSESGAVLLTTLLIMAIMAALAVALMDDVRLALKRTANVNDYAQADWYVRGAEDYVGDVLGASLLNIEAENRNQVLTSMNPLILPLEGGAMQLDIRDGSHCFNLNSLTSAENESVNTVAANQFIQLMEILGIPPIQSTVISARVIDWIDSDNQTQPGGAEDGDYLRRTPPILTANTGLASVMELRAIEGITAEIYETLRPWVCIGPPHEISPFNVDSAQPWQAPLLATYLGGQE 248          
BLAST of mRNA_P-canaliculata_contig97265.23811.1 vs. uniprot
Match: A0A848V7B9_9PROT (Type II secretion system protein K n=1 Tax=Hellea sp. TaxID=2715692 RepID=A0A848V7B9_9PROT)

HSP 1 Score: 173 bits (438), Expect = 4.930e-49
Identity = 101/246 (41.06%), Postives = 148/246 (60.16%), Query Frame = 0
Query:    1 MSRSSQKDRGTVLLTTLLIMTVMAAITVALMDDIQLSVKRTINVQAYAQADWQADGAEDFVTAYLQNDFAALAPEAKAVLLGAKVPQILPTPTGSITLTLKDASQCFNLNAVVNEAGVRDDAAWRE--------FAQLGQLLGLAENQATSLSSALVDWQDADQQQSTGGAEDGTYLRKNPPYRTADTALRGPEELRAIDGMDEDLWELFRPFVCTGGIGVLPQINVNSLTGERLLVLASALSGEE 238
            M+R S KD+G +LLTTLLIM++M+A+ VA+MDD+++++ R+ N+Q +AQ DW     E F  +Y++ +F  L+PE +   L   +   LP   G +TL + D +QC  L+A+  +    D     E        F +L +  G+ E  A +L++A+VDWQD DQQ S GGAED +YL  NP YRT +T      ELRA+ GM E+L  +  PF+C G      QIN+N+L G + LVL S L G++
Sbjct:    1 MTRQSDKDKGAILLTTLLIMSMMSALAVAMMDDVRVAILRSKNIQTHAQTDWYVQAGESFAESYVEKNFLNLSPEQQNAALARPLFAELPIEGGLMTLVISDGTQCLPLSAL--QPPPSDGRGQEERPTTFTDAFQRLLEETGMGEIDAANLTAAIVDWQDGDQQISNGGAEDYSYLGLNPAYRTPNTFFSAVSELRAVQGMSEELLNMIAPFICAGDPERGGQININTL-GPQHLVLLSVLLGDD 243          
BLAST of mRNA_P-canaliculata_contig97265.23811.1 vs. uniprot
Match: UPI0003A3BA75 (type II secretion system minor pseudopilin GspK n=1 Tax=Robiginitomaculum antarcticum TaxID=437507 RepID=UPI0003A3BA75)

HSP 1 Score: 170 bits (431), Expect = 4.240e-48
Identity = 95/231 (41.13%), Postives = 138/231 (59.74%), Query Frame = 0
Query:    8 DRGTVLLTTLLIMTVMAAITVALMDDIQLSVKRTINVQAYAQADWQADGAEDFVTAYLQNDFAALAPEAKAVLLGAKVPQILPTPTGSITLTLKDASQCFNLNAVVNEAGVRDDAAWREFAQLGQLLGLAENQATSLSSALVDWQDADQQQSTGGAEDGTYLRKNPPYRTADTALRGPEELRAIDGMDEDLWELFRPFVCTGGIGVLPQINVNSLTGERLLVLASALSGEE 238
            +RG VLLTT+L+M +MA++ VA+ DD++ +V+R  N+Q  AQ D  ADGAEDF   YL       +P      L A  P I P   G +TL+++D SQC +L  +    G R+      F QL +++G+  +QA  ++SA+ DWQD D     GGAEDG YL  +PPYRTA+T +  P+ELRA+ G D  L    RP++C        +IN+N+LT + + +LA+ L G +
Sbjct:    9 ERGAVLLTTILVMVIMASVAVAIFDDLRYAVRRANNIQTAAQLDLYADGAEDFAAQYLAQVMGTASPAQMNAGLNAPEPIIFPLDNGVMTLSVRDGSQCLSLTQMNRGNGRRN------FRQLLEVMGVPTSQAAQMTSAVADWQDPDSAPLPGGAEDGYYLALDPPYRTANTPMSSPQELRAVRGFDAALVSRLRPYICARPDPAQSRINLNTLTADYVPLLAAYLGGTD 233          
BLAST of mRNA_P-canaliculata_contig97265.23811.1 vs. uniprot
Match: UPI000E6AC47C (type II secretion system minor pseudopilin GspK n=1 Tax=Indioceanicola profundi TaxID=2220096 RepID=UPI000E6AC47C)

HSP 1 Score: 152 bits (384), Expect = 3.520e-41
Identity = 97/237 (40.93%), Postives = 135/237 (56.96%), Query Frame = 0
Query:    6 QKDRGTVLLTTLLIMTVMAAITVALMDDIQLSVKRTINVQAYAQADWQADGAEDFVTAYLQNDFAALAPEAKAVLLGAKVPQILPTPTGSITLTLKDASQCFNLNAVVNEAGVRDDA----AWREFAQLGQLLGLAENQATSLSSALVDWQDADQQQSTGGAEDGTYLRKNPPYRTADTALRGPEELRAIDGMDEDLWELFRPFVCTGGIGVLPQINVNSLTGERLLVLASALSGEE 238
            +K+ G VLLT LL++ VMAA+ VA+M++I+LSVKRT N +  AQA W A GAE F    +       A E     LG   P +LP   G +  T++DA+ CFNLN++   AG  +      A  +F  L + LGL +     L+ AL DW D D +  + GAED  Y R +PP+RTA+  L G  ELRA+ G + + + L RPFVC         +N+NSLT E + +L   L+G+E
Sbjct:    4 RKESGAVLLTVLLMVAVMAAVAVAMMEEIRLSVKRTANAEISAQAQWYALGAETFAAKLVARAEKLGAGEQVRARLGQ--PMVLPVDGGRMVATIRDATNCFNLNSLAQPAGADESQGRARAQEQFRNLLRALGLFDGDQDRLAGALTDWVDEDSRPESPGAEDQHYTRLDPPFRTANALLTGVGELRAVAGFELETYRLLRPFVCARPDMEQTVLNLNSLTPEDVPLLIM-LAGKE 237          
BLAST of mRNA_P-canaliculata_contig97265.23811.1 vs. uniprot
Match: A0A8J3G1R6_9PROT (Uncharacterized protein n=1 Tax=Algimonas arctica TaxID=1479486 RepID=A0A8J3G1R6_9PROT)

HSP 1 Score: 150 bits (379), Expect = 3.760e-40
Identity = 93/243 (38.27%), Postives = 141/243 (58.02%), Query Frame = 0
Query:    2 SRSSQKDRGTVLLTTLLIMTVMAAITVALMDDIQLSVKRTINVQAYAQADWQADGAEDFVTAYLQNDFAALAPEAKAVLLGAKVPQILPTPTGSITLTLKDASQCFNLNAVVNEAGVRDDAAWREFAQLGQLLGLAENQATSLSSALVDWQDADQQQSTGGAEDGTYL--------RKNPPYRTADTALRGPEELRAIDGMDEDLWELFRPFVCTGGIGVLPQINVNSLTGERLLVLASALSG 236
            SR+   + GTVLL+TLL++++M+A+ +AL+  ++ SV RT  + A +QAD  A GA DF  + +    A +   A    L +  P +LP   GSITL + D + CF L+A+ + AG+  D A + F  L + +G+ +++A+S+++A VDW D D Q   GGAEDGTYL        R   P+RTA+  ++   ELRAI+ MDE L+    P VC G  G   + N+++       VLA+ L G
Sbjct:    3 SRARSDEDGTVLLSTLLVLSLMSAVALALLATVRTSVVRTSALNARSQADLYAQGARDFAQSQIDL-VAGVEGAALNAQLRSGDPIVLPFDNGSITLAVSDGTHCFRLSALSSGAGLGSDTAQQRFTSLMRAIGVDQSRASSIAAAAVDWVDTDSQTRAGGAEDGTYLSRQAAQTWRGGGPHRTANVPMQSVTELRAINDMDEALFRRLLPHVCIGTPGTQTRFNIDTAEARHAPVLATILGG 244          
BLAST of mRNA_P-canaliculata_contig97265.23811.1 vs. uniprot
Match: A0A2G2J4G9_9PROT (Type II secretion system protein K n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2J4G9_9PROT)

HSP 1 Score: 142 bits (357), Expect = 2.990e-37
Identity = 87/229 (37.99%), Postives = 133/229 (58.08%), Query Frame = 0
Query:    3 RSSQKDRGTVLLTTLLIMTVMAAITVALMDDIQLSVKRTINVQAYAQADWQADGAEDFVTAYLQNDFAALAPEAKAVLLGAKVPQILPTPTGSITLTLKDASQCFNLNAVVNEAGVRDDAAWREFAQLGQLLGLAENQATSLSSALVDWQDADQQQSTGGAEDGTYLRKNPPYRTADTALRGPEELRAIDGMDEDLWELFRPFVCTGGIGVLPQINVNSLTGERLLVLA 231
            R  + + G VLLTTLL+M +MAAIT+A++DDI+ S++RTI+VQ+  Q  W   G EDF   +L+N  +    E     + A  P I P   G + + ++DA  C+N+N + N    +  A+ ++F+Q  QLL      A  L++++ DW D D   ++GGAE  +Y    P Y  ADT +    ELRA+ G+DE +++   PFVC G      +INVN+L+ E+  +LA
Sbjct:    2 RPVRNETGAVLLTTLLLMALMAAITIAIVDDIRFSIRRTISVQSAEQLAWFERGGEDFAKVWLENVHSETQAEL-GEFIRADNPVIFPIDQGVLNIRIQDAHNCYNVNQLANPKTKK--ASRQQFSQFLQLLEFDITDADILAASIQDWVDTDTIPNSGGAEGLSYANLIPAYHAADTLMVDISELRAVQGIDESIYQRLLPFVCAGTNTKQNRINVNTLSLEQAPLLA 227          
BLAST of mRNA_P-canaliculata_contig97265.23811.1 vs. uniprot
Match: A0A7Y1SM71_9PROT (Type II secretion system protein K n=1 Tax=Hyphomonadaceae bacterium TaxID=2026748 RepID=A0A7Y1SM71_9PROT)

HSP 1 Score: 142 bits (357), Expect = 3.270e-37
Identity = 90/235 (38.30%), Postives = 133/235 (56.60%), Query Frame = 0
Query:    1 MSRSSQK--DRGTVLLTTLLIMTVMAAITVALMDDIQLSVKRTINVQAYAQADWQADGAEDFVTAYLQNDFAALAPEAKAVLLGAKVPQILPTPTGSITLTLKDASQCFNLNAVVN-EAGVRDDAAWREFAQLGQLLGLAENQATSLSSALVDWQDADQQQSTGGAEDGTYLRKNPPYRTADTALRGPEELRAIDGMDEDLWELFRPFVCTGGIGVLPQINVNSLTGERLLVLAS 232
            MSR S    +RG VL+TTLL+M+VMA ITV +MDDI+ S+KR  + Q   Q  W + G ED+   +L     +   + + ++L  + P I P   G + +  +D   CFNLNA+ + E G   D A ++ A+L   L L + +A  +++ + DW DAD     GGAED TY R  P YR A+T L    ELR I+G+DE++++  RP+VC         IN+N+ T E   V+ +
Sbjct:    1 MSRPSDNTSERGAVLITTLLLMSVMAVITVTIMDDIRFSIKRAASTQTAEQLAWYSRGGEDYARNWLGTQIDSDQKQLRKIIL-LQEPAIFPIEQGELQIRARDGRNCFNLNALAHPETG---DEARQKLARLLTFLELGDAEAEMIAAGVRDWVDADSVPLQGGAEDFTYSRLEPAYRAANTPLADISELREINGIDEEIYQSIRPYVCVMRDTEQNLININTATLEDAAVIGA 231          
BLAST of mRNA_P-canaliculata_contig97265.23811.1 vs. uniprot
Match: A0A326KXG2_9CAUL (Type II secretion system protein K n=2 Tax=Brevundimonas TaxID=41275 RepID=A0A326KXG2_9CAUL)

HSP 1 Score: 137 bits (346), Expect = 1.540e-35
Identity = 92/239 (38.49%), Postives = 125/239 (52.30%), Query Frame = 0
Query:    3 RSSQKDRGTVLLTTLLIMTVMAAITVALMDDIQLSVKRTINVQAYAQADWQADGAEDFVTAYLQNDFAALAPEAKAVLLGAKVPQIL--PTPTGSITLTLKDASQCFNLNAVV---NEAGVRDDAAWREFAQLGQLLGLAENQATSLSSALVDWQDADQQQSTGGAEDGTYLRKNPPYRTADTALRGPEELRAIDGMDEDLWELFRPFVCTGGIGVLPQINVNSLTGERLLVLASALSG 236
            R +   +G  LLT LL++ VMAA+ V ++DDI+ SV+RT NV+  AQA W A GAE      +  D  A+ P A+  L      ++L  P   GSI   + D   CFNLN++V   +E  V +  A   F  LG  LG    + T+L+ AL DW D D   S GG ED  Y     PYRT    L    E+RA+ GMDE L+   RP +C   +  +  IN+N+LT E+  +L     G
Sbjct:    2 RRAADRQGMALLTVLLLVAVMAAVAVLILDDIRFSVRRTTNVETQAQAQWYAAGAEALARRQIA-DLMAVDP-ARTPLEPRWNGRVLDFPIDEGSIRAVVTDGQACFNLNSLVVGQDEDLVANPEAQARFVALGAALGAPRGRMTALAGALTDWMDGDADVSPGGGEDARYAGLATPYRTGGVMLADVSEMRAVAGMDEALYRRLRPLICALPVSGVSPINLNTLTAEQAPLLVMMTGG 238          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig97265.23811.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001673398F3.850e-10367.92type II secretion system minor pseudopilin GspK n=... [more]
UPI0004184FE17.920e-5945.80type II secretion system minor pseudopilin GspK n=... [more]
A0A420WE48_9PROT7.530e-5143.22Type II secretion system protein K (GspK) n=1 Tax=... [more]
A0A848V7B9_9PROT4.930e-4941.06Type II secretion system protein K n=1 Tax=Hellea ... [more]
UPI0003A3BA754.240e-4841.13type II secretion system minor pseudopilin GspK n=... [more]
UPI000E6AC47C3.520e-4140.93type II secretion system minor pseudopilin GspK n=... [more]
A0A8J3G1R6_9PROT3.760e-4038.27Uncharacterized protein n=1 Tax=Algimonas arctica ... [more]
A0A2G2J4G9_9PROT2.990e-3737.99Type II secretion system protein K n=1 Tax=Robigin... [more]
A0A7Y1SM71_9PROT3.270e-3738.30Type II secretion system protein K n=1 Tax=Hyphomo... [more]
A0A326KXG2_9CAUL1.540e-3538.49Type II secretion system protein K n=2 Tax=Brevund... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038072GspK, central domain superfamilyGENE3D1.10.40.60coord: 103..212
e-value: 7.9E-29
score: 102.1
IPR038072GspK, central domain superfamilySUPERFAMILY158544GspK insert domain-likecoord: 106..208
IPR005628General secretion pathway protein KPFAMPF03934T2SSKcoord: 34..233
e-value: 1.3E-44
score: 152.7
IPR005628General secretion pathway protein KPANTHERPTHR38831FAMILY NOT NAMEDcoord: 6..235
NoneNo IPR availablePANTHERPTHR38831:SF1TYPE II SECRETION SYSTEM PROTEIN K-RELATEDcoord: 6..235
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..238
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availableSUPERFAMILY54523Pili subunitscoord: 39..115
NoneNo IPR availableTMHMMTMhelixcoord: 12..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig97265contigP-canaliculata_contig97265:1..714 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig97265.23811.1mRNA_P-canaliculata_contig97265.23811.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig97265 1..714 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig97265.23811.1 ID=prot_P-canaliculata_contig97265.23811.1|Name=mRNA_P-canaliculata_contig97265.23811.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=238bp
MSRSSQKDRGTVLLTTLLIMTVMAAITVALMDDIQLSVKRTINVQAYAQA
DWQADGAEDFVTAYLQNDFAALAPEAKAVLLGAKVPQILPTPTGSITLTL
KDASQCFNLNAVVNEAGVRDDAAWREFAQLGQLLGLAENQATSLSSALVD
WQDADQQQSTGGAEDGTYLRKNPPYRTADTALRGPEELRAIDGMDEDLWE
LFRPFVCTGGIGVLPQINVNSLTGERLLVLASALSGEE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038072GspK_central_sf
IPR005628GspK