prot_P-canaliculata_contig97.23766.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig97.23766.1
Unique Nameprot_P-canaliculata_contig97.23766.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length152
Homology
BLAST of mRNA_P-canaliculata_contig97.23766.1 vs. uniprot
Match: A0A6G1LJC7_9PEZI (Replication protein A, subunit RPA32 n=1 Tax=Teratosphaeria nubilosa TaxID=161662 RepID=A0A6G1LJC7_9PEZI)

HSP 1 Score: 177 bits (448), Expect = 1.070e-52
Identity = 90/121 (74.38%), Postives = 102/121 (84.30%), Query Frame = 0
Query:   30 MDYG--YATTAYSTTGGAGGGGFMPGSQTDSP-STKRSYGKDTLRPVTIKQLLNAHHPHPDAEHFNIDNAETTQVTFVGQVRNISRQTTNVTYKLDDGTGIVEVKEWVDSEASRAFDGPDK 147
            MDY   Y+TT+Y   GGAGGGGFMPGSQ+DSP S KR+YGKDTLRPVTIKQLL A+HPHPDA+HF ID AE TQ+TFVGQVRNIS QTTN+TYKLDDGTGI+EVK WVD+EA  + D  +K
Sbjct:    1 MDYSNNYSTTSYGAQGGAGGGGFMPGSQSDSPNSAKRTYGKDTLRPVTIKQLLEAYHPHPDADHFMIDEAEATQITFVGQVRNISTQTTNITYKLDDGTGIIEVKVWVDAEAIESDDSKNK 121          
BLAST of mRNA_P-canaliculata_contig97.23766.1 vs. uniprot
Match: N1QDN9_SPHMS (Replication protein A, subunit RPA32 n=1 Tax=Sphaerulina musiva (strain SO2202) TaxID=692275 RepID=N1QDN9_SPHMS)

HSP 1 Score: 174 bits (440), Expect = 1.680e-51
Identity = 90/125 (72.00%), Postives = 103/125 (82.40%), Query Frame = 0
Query:   30 MDYGYATTAYSTTGGAGGGGFMPGSQTD--SPSTKRSYGKDTLRPVTIKQLLNAHHPHPDAEHFNIDNAETTQVTFVGQVRNISRQTTNVTYKLDDGTGIVEVKEWVDSE--ASRAFDGPDKKDK 150
            MDYGY+TT+Y   GG  GGGFMPGSQ +  S STKR+YGKDTLRPVTIKQLL+AHHPHPDA+HF ID++ETTQVTFVGQVRNIS QTTNVTYK+DDGTG++EVK WVD++        G  KKDK
Sbjct:    1 MDYGYSTTSYGAQGGNSGGGFMPGSQNNENSASTKRTYGKDTLRPVTIKQLLDAHHPHPDADHFIIDDSETTQVTFVGQVRNISAQTTNVTYKVDDGTGLIEVKVWVDADNFTGEEESGAVKKDK 125          
BLAST of mRNA_P-canaliculata_contig97.23766.1 vs. uniprot
Match: A0A2G5H9J9_CERBT (Replication protein A 32 kDa subunit n=3 Tax=Cercospora TaxID=29002 RepID=A0A2G5H9J9_CERBT)

HSP 1 Score: 172 bits (435), Expect = 1.040e-50
Identity = 89/124 (71.77%), Postives = 102/124 (82.26%), Query Frame = 0
Query:   30 MDYGYATTAYSTTGGAGGGGFMPGSQTD-SPSTKRSYGKDTLRPVTIKQLLNAHHPHPDAEHFNIDNAETTQVTFVGQVRNISRQTTNVTYKLDDGTGIVEVKEWVDSE--ASRAFDGPDKKDK 150
            MDYGY+TT+Y   GG  GGGFMPGSQ + S S KR+YGKDTLRPVTIKQLL+AHHPHPDA+HF I  +ETTQVTFVGQ+RNIS QTTNVTYKLDDGTGI+EVK WVD++  A+    G  +KDK
Sbjct:    1 MDYGYSTTSYGAQGGNSGGGFMPGSQNENSASNKRTYGKDTLRPVTIKQLLDAHHPHPDADHFMIGESETTQVTFVGQIRNISAQTTNVTYKLDDGTGIIEVKVWVDADTLAAEEAGGMVRKDK 124          
BLAST of mRNA_P-canaliculata_contig97.23766.1 vs. uniprot
Match: A0A6A6PTQ2_9PEZI (Uncharacterized protein n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6PTQ2_9PEZI)

HSP 1 Score: 171 bits (434), Expect = 1.600e-50
Identity = 85/116 (73.28%), Postives = 96/116 (82.76%), Query Frame = 0
Query:   30 MDYGYATTAYSTTGGAGGGGFMPGSQTDSPSTKRSYGKDTLRPVTIKQLLNAHHPHPDAEHFNIDNAETTQVTFVGQVRNISRQTTNVTYKLDDGTGIVEVKEWVDSEASRAFDGP 145
            MDYGYATT+Y   GG  GGGFMPGSQ DSP+ KRSYGKDTLRPVTIKQLL+A HP+ DAE+F +D +E TQVTFVGQ+RNIS QTTNVTYKLDDGTG +EVK W+D+EA    D P
Sbjct:    1 MDYGYATTSYGAQGGNDGGGFMPGSQNDSPNAKRSYGKDTLRPVTIKQLLDATHPNADAEYFLVDGSEMTQVTFVGQIRNISTQTTNVTYKLDDGTGTIEVKVWIDAEALNNPDDP 116          
BLAST of mRNA_P-canaliculata_contig97.23766.1 vs. uniprot
Match: A0A4U0UEJ0_9PEZI (Uncharacterized protein n=1 Tax=Salinomyces thailandica TaxID=706561 RepID=A0A4U0UEJ0_9PEZI)

HSP 1 Score: 171 bits (433), Expect = 3.060e-50
Identity = 87/112 (77.68%), Postives = 98/112 (87.50%), Query Frame = 0
Query:   30 MDYG--YATTAYSTTGGAGGGGFMPGSQTDSPST-KRSYGKDTLRPVTIKQLLNAHHPHPDAEHFNIDNAETTQVTFVGQVRNISRQTTNVTYKLDDGTGIVEVKEWVDSEA 138
            MDY   Y+TT+Y   GGA GGGF+PGSQTDSPST KRSYGKDTLRPVTIKQL++AHHPHPDAE F ID++E TQVTFVGQVR IS QTTN+TYKLDDGTGI+EVK W+D+EA
Sbjct:    1 MDYSNNYSTTSYGAQGGASGGGFLPGSQTDSPSTGKRSYGKDTLRPVTIKQLVDAHHPHPDAEFFMIDDSECTQVTFVGQVRGISTQTTNITYKLDDGTGIMEVKVWIDAEA 112          
BLAST of mRNA_P-canaliculata_contig97.23766.1 vs. uniprot
Match: A0A2S6C6M8_9PEZI (RPA_C domain-containing protein n=1 Tax=Cercospora berteroae TaxID=357750 RepID=A0A2S6C6M8_9PEZI)

HSP 1 Score: 179 bits (455), Expect = 3.210e-50
Identity = 96/149 (64.43%), Postives = 113/149 (75.84%), Query Frame = 0
Query:    6 NSELHAEDPKACLQHLAIFPL-IAIMDYGYATTAYSTTGGAGGGGFMPGSQTD-SPSTKRSYGKDTLRPVTIKQLLNAHHPHPDAEHFNIDNAETTQVTFVGQVRNISRQTTNVTYKLDDGTGIVEVKEWVDSE--ASRAFDGPDKKDK 150
            N+  H       L H ++ P   A MDYGY+TT+Y   GG  GGGFMPGSQ + S S KR+YGKDTLRPVTIKQLL+AHHPHPDA+HF ID++ETTQVTFVGQ+RNIS QTTNVTYKLDDGTGI+EVK WVD++  A+    G  +KDK
Sbjct:  386 NTPHHLNSISLVLHHRSVKPRNTATMDYGYSTTSYGAQGGNSGGGFMPGSQNENSASNKRTYGKDTLRPVTIKQLLDAHHPHPDADHFMIDDSETTQVTFVGQIRNISAQTTNVTYKLDDGTGIIEVKVWVDADTLAAEEAGGMVRKDK 534          
BLAST of mRNA_P-canaliculata_contig97.23766.1 vs. uniprot
Match: A0A3M7F7L3_HORWE (RPA_C domain-containing protein n=15 Tax=Hortaea werneckii TaxID=91943 RepID=A0A3M7F7L3_HORWE)

HSP 1 Score: 171 bits (432), Expect = 4.100e-50
Identity = 88/118 (74.58%), Postives = 98/118 (83.05%), Query Frame = 0
Query:   30 MDYGYATTAYSTTGGAGGGGFMPGSQTDSPST-KRSYGKDTLRPVTIKQLLNAHHPHPDAEHFNIDNAETTQVTFVGQVRNISRQTTNVTYKLDDGTGIVEVKEWVDSEASRAFDGPD 146
            MDY   +T+Y   GGAGGGGFMPGSQ DSPS  KRSYGKDTLRPVTIKQLL+A HPHPDAE+F ID AE TQVTFVGQ+RNIS QTTNVTYKLDDGTGI+EVK W+D++    F+ PD
Sbjct:    1 MDYNTYSTSYGAQGGAGGGGFMPGSQNDSPSAGKRSYGKDTLRPVTIKQLLDAQHPHPDAEYFIIDGAECTQVTFVGQIRNISTQTTNVTYKLDDGTGIIEVKVWIDTDT---FNDPD 115          
BLAST of mRNA_P-canaliculata_contig97.23766.1 vs. uniprot
Match: UPI001DEFC95C (Replication factor A protein 2 n=1 Tax=Passalora fulva TaxID=5499 RepID=UPI001DEFC95C)

HSP 1 Score: 169 bits (429), Expect = 9.060e-50
Identity = 84/117 (71.79%), Postives = 97/117 (82.91%), Query Frame = 0
Query:   30 MDYGYATTAYSTTGGAGGGGFMPGSQTDSPSTKR-SYGKDTLRPVTIKQLLNAHHPHPDAEHFNIDNAETTQVTFVGQVRNISRQTTNVTYKLDDGTGIVEVKEWVDSEASRAFDGP 145
            MDYGY+TT+Y   GGA GGGFMPGSQ +  +TK+ SYGKDTLRPVTIKQL++AHHPHP A+HF ID +E TQVTFVGQ+RNIS QTTNVTYKLDDGTG +EVK W+D+EA    D P
Sbjct:    1 MDYGYSTTSYGAQGGANGGGFMPGSQGEGSATKKNSYGKDTLRPVTIKQLIDAHHPHPGADHFVIDESECTQVTFVGQIRNISTQTTNVTYKLDDGTGTIEVKLWIDAEAIENPDDP 117          
BLAST of mRNA_P-canaliculata_contig97.23766.1 vs. uniprot
Match: F9XK80_ZYMTI (RPA_C domain-containing protein n=5 Tax=Zymoseptoria TaxID=1047167 RepID=F9XK80_ZYMTI)

HSP 1 Score: 169 bits (429), Expect = 9.840e-50
Identity = 83/118 (70.34%), Postives = 100/118 (84.75%), Query Frame = 0
Query:   30 MDYGYATTAYSTTGGAGGGGFMPGSQT--DSPSTKRS-YGKDTLRPVTIKQLLNAHHPHPDAEHFNIDNAETTQVTFVGQVRNISRQTTNVTYKLDDGTGIVEVKEWVDSEASRAFDG 144
            MDYGY+TT+Y   GGA GGGFMPGSQ+  D+ +TKR+ YGKDTLRPVTIKQLL+AHHPHPDA+HF +D+ E TQVTF+GQ+RNIS QTTNVTYK+DDGTG +EVK W+D+EA    +G
Sbjct:    1 MDYGYSTTSYGAQGGASGGGFMPGSQSANDNSATKRTGYGKDTLRPVTIKQLLDAHHPHPDADHFMVDDTEMTQVTFIGQIRNISTQTTNVTYKMDDGTGSIEVKVWIDAEAFEPAEG 118          
BLAST of mRNA_P-canaliculata_contig97.23766.1 vs. uniprot
Match: UPI000CE1878E (replication factor A protein 2-like n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE1878E)

HSP 1 Score: 169 bits (429), Expect = 7.200e-49
Identity = 90/138 (65.22%), Postives = 99/138 (71.74%), Query Frame = 0
Query:    1 APPLRNSELHAEDPKACLQHLAIFPLIAIMDYGYATTAYSTTGGAGGGGFMPGSQTDSPSTKRSYGKDTLRPVTIKQLLNAHHPHPDAEHFNIDNAETTQVTFVGQVRNISRQTTNVTYKLDDGTGIVEVKEWVDSEA 138
            AP + +   H       +    I     I DYGY TT YS   G  GGGFMPGSQTDSPS KRSYGKDTLRPVTI+QLL+A  PHPDAE+F I  A+TTQVTFVGQ+RNIS Q TN TYKLDDGTGI+EVK WVDSEA
Sbjct:   58 APAIHDPVQHIMGESVSISRFNIKTNSVIPDYGY-TTNYSNGAGGDGGGFMPGSQTDSPSAKRSYGKDTLRPVTIRQLLDAQQPHPDAEYFTISGADTTQVTFVGQIRNISTQATNTTYKLDDGTGIIEVKLWVDSEA 194          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig97.23766.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G1LJC7_9PEZI1.070e-5274.38Replication protein A, subunit RPA32 n=1 Tax=Terat... [more]
N1QDN9_SPHMS1.680e-5172.00Replication protein A, subunit RPA32 n=1 Tax=Sphae... [more]
A0A2G5H9J9_CERBT1.040e-5071.77Replication protein A 32 kDa subunit n=3 Tax=Cerco... [more]
A0A6A6PTQ2_9PEZI1.600e-5073.28Uncharacterized protein n=1 Tax=Neohortaea acidoph... [more]
A0A4U0UEJ0_9PEZI3.060e-5077.68Uncharacterized protein n=1 Tax=Salinomyces thaila... [more]
A0A2S6C6M8_9PEZI3.210e-5064.43RPA_C domain-containing protein n=1 Tax=Cercospora... [more]
A0A3M7F7L3_HORWE4.100e-5074.58RPA_C domain-containing protein n=15 Tax=Hortaea w... [more]
UPI001DEFC95C9.060e-5071.79Replication factor A protein 2 n=1 Tax=Passalora f... [more]
F9XK80_ZYMTI9.840e-5070.34RPA_C domain-containing protein n=5 Tax=Zymoseptor... [more]
UPI000CE1878E7.200e-4965.22replication factor A protein 2-like n=1 Tax=Quercu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 62..151
e-value: 5.3E-28
score: 99.3
IPR040260Replication factor A protein-likePANTHERPTHR13989REPLICATION PROTEIN A-RELATEDcoord: 40..141
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 70..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig97contigP-canaliculata_contig97:40737..41248 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig97.23766.1mRNA_P-canaliculata_contig97.23766.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig97 40737..41248 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig97.23766.1 ID=prot_P-canaliculata_contig97.23766.1|Name=mRNA_P-canaliculata_contig97.23766.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=152bp
APPLRNSELHAEDPKACLQHLAIFPLIAIMDYGYATTAYSTTGGAGGGGF
MPGSQTDSPSTKRSYGKDTLRPVTIKQLLNAHHPHPDAEHFNIDNAETTQ
VTFVGQVRNISRQTTNVTYKLDDGTGIVEVKEWVDSEASRAFDGPDKKDK
VG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040260RFA2-like
IPR012340NA-bd_OB-fold