prot_P-canaliculata_contig9623.23663.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9623.23663.1
Unique Nameprot_P-canaliculata_contig9623.23663.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length109
Homology
BLAST of mRNA_P-canaliculata_contig9623.23663.1 vs. uniprot
Match: UPI001D04FC08 (uncharacterized protein n=2 Tax=Cercospora kikuchii TaxID=84275 RepID=UPI001D04FC08)

HSP 1 Score: 154 bits (389), Expect = 2.750e-41
Identity = 72/108 (66.67%), Postives = 82/108 (75.93%), Query Frame = 0
Query:    2 PLTTLTKKDVPFVWSPACQSAFADLKQQFVSGPVLQHFDFDRPCRVETDASDFVCGGVLLQPDADNHWRPVAFFSSKMTPAECNYEIYDKELLAIIRALEVWRPELEG 109
            PLT LT+KD PF W+PACQ AF DLKQ FV GP+L  FD+ +   VETDASD+V  G+L Q D +   RP+AFFS K +PAECNYEIYDKELLAIIR  E WRPELEG
Sbjct:  966 PLTALTRKDTPFAWTPACQKAFDDLKQAFVEGPILAPFDWTKEVIVETDASDYVSAGILSQYDNEGILRPIAFFSKKHSPAECNYEIYDKELLAIIRCFEEWRPELEG 1073          
BLAST of mRNA_P-canaliculata_contig9623.23663.1 vs. uniprot
Match: U1GB49_ENDPU (Reverse transcriptase domain-containing protein n=1 Tax=Endocarpon pusillum (strain Z07020 / HMAS-L-300199) TaxID=1263415 RepID=U1GB49_ENDPU)

HSP 1 Score: 149 bits (376), Expect = 6.870e-40
Identity = 70/108 (64.81%), Postives = 79/108 (73.15%), Query Frame = 0
Query:    2 PLTTLTKKDVPFVWSPACQSAFADLKQQFVSGPVLQHFDFDRPCRVETDASDFVCGGVLLQPDADNHWRPVAFFSSKMTPAECNYEIYDKELLAIIRALEVWRPELEG 109
            PLT LT+KDVPF W    + AF  LK  F S PVLQHFD D PC VETDASD  CGGVL QP+ +   +PVA+FS +  PAE NYEIYDKEL+AI+RA E WRPELEG
Sbjct:  349 PLTKLTRKDVPFNWGEEARKAFQTLKDMFTSSPVLQHFDPDLPCTVETDASDDACGGVLFQPNNEGILQPVAYFSKRHAPAESNYEIYDKELMAIVRAFEEWRPELEG 456          
BLAST of mRNA_P-canaliculata_contig9623.23663.1 vs. uniprot
Match: A0A0F8CN42_CERFI (RNA-directed DNA polymerase n=1 Tax=Ceratocystis fimbriata f. sp. platani TaxID=88771 RepID=A0A0F8CN42_CERFI)

HSP 1 Score: 150 bits (378), Expect = 8.270e-40
Identity = 72/109 (66.06%), Postives = 81/109 (74.31%), Query Frame = 0
Query:    1 APLTTLTKKDVPFVWSPACQSAFADLKQQFVSGPVLQHFDFDRPCRVETDASDFVCGGVLLQPDADNHWRPVAFFSSKMTPAECNYEIYDKELLAIIRALEVWRPELEG 109
            APLT LTKKDVPF+W  AC+SAF  LK  F S  +L HFD+D+   +ETDASD+V  GV+ Q D D   RPVAFFS K + AECNYEIYDKELLAIIR  E WRPELEG
Sbjct:  824 APLTRLTKKDVPFLWDSACESAFQTLKDHFSSAAILAHFDWDKDVILETDASDYVSAGVMSQRDDDGTLRPVAFFSKKHSAAECNYEIYDKELLAIIRCFEEWRPELEG 932          
BLAST of mRNA_P-canaliculata_contig9623.23663.1 vs. uniprot
Match: A0A0D9NJD5_METAN (Uncharacterized protein n=1 Tax=Metarhizium anisopliae BRIP 53293 TaxID=1291518 RepID=A0A0D9NJD5_METAN)

HSP 1 Score: 148 bits (373), Expect = 3.880e-39
Identity = 69/108 (63.89%), Postives = 78/108 (72.22%), Query Frame = 0
Query:    2 PLTTLTKKDVPFVWSPACQSAFADLKQQFVSGPVLQHFDFDRPCRVETDASDFVCGGVLLQPDADNHWRPVAFFSSKMTPAECNYEIYDKELLAIIRALEVWRPELEG 109
            PLT LTKKD  F WS  C+ AF DLKQ F S P+LQHFD D+P  VE D+SD+V  G L QPD      PVAFFS K+ PAECNY+IYDKEL+AI+RA E WR ELEG
Sbjct:  337 PLTRLTKKDTSFTWSADCEKAFTDLKQAFTSAPILQHFDPDKPSTVECDSSDYVNAGCLSQPDDSGVLHPVAFFSRKLIPAECNYDIYDKELMAIVRAFEEWRAELEG 444          
BLAST of mRNA_P-canaliculata_contig9623.23663.1 vs. uniprot
Match: A0A0G4PXS4_PENCA (RNA-directed DNA polymerase (Reverse transcriptase) n=2 Tax=Penicillium TaxID=5073 RepID=A0A0G4PXS4_PENCA)

HSP 1 Score: 147 bits (371), Expect = 7.330e-39
Identity = 64/108 (59.26%), Postives = 81/108 (75.00%), Query Frame = 0
Query:    2 PLTTLTKKDVPFVWSPACQSAFADLKQQFVSGPVLQHFDFDRPCRVETDASDFVCGGVLLQPDADNHWRPVAFFSSKMTPAECNYEIYDKELLAIIRALEVWRPELEG 109
            PLT LTKKD PF W   CQ+AF +LK+ F S P+L+HFD D+P  +E D+SD+V  G L QPD D    PVAFFS K++PAECNY+IYDKEL+A++++ E WR ELEG
Sbjct:  865 PLTRLTKKDTPFTWDDKCQTAFEELKEAFTSAPILRHFDPDKPSTIECDSSDYVNAGCLSQPDPDGTLHPVAFFSRKLSPAECNYDIYDKELMAVVQSFEEWRAELEG 972          
BLAST of mRNA_P-canaliculata_contig9623.23663.1 vs. uniprot
Match: UPI001D05406A (uncharacterized protein n=1 Tax=Morchella sextelata TaxID=1174677 RepID=UPI001D05406A)

HSP 1 Score: 145 bits (367), Expect = 2.540e-38
Identity = 68/109 (62.39%), Postives = 83/109 (76.15%), Query Frame = 0
Query:    1 APLTTLTKKDVPFVWSPACQSAFADLKQQFVSGPVLQHFDFDRPCRVETDASDFVCGGVLLQPDADNHWRPVAFFSSKMTPAECNYEIYDKELLAIIRALEVWRPELEG 109
            +PLT LT+KD+PF W+P  Q+AF  LK+ F + P+L HFD ++   VETDASD+V  GVL Q D +   RPVA+FS K +PAECNYEIYDKELLAIIR+ E WRPELEG
Sbjct:  537 SPLTRLTRKDIPFEWTPEAQTAFNALKEAFTTAPILTHFDPEKEITVETDASDYVSAGVLSQYDDNGTLRPVAYFSKKHSPAECNYEIYDKELLAIIRSFEEWRPELEG 645          
BLAST of mRNA_P-canaliculata_contig9623.23663.1 vs. uniprot
Match: A0A545VJN2_9HYPO (Retrovirus polyprotein n=1 Tax=Cordyceps javanica TaxID=43265 RepID=A0A545VJN2_9HYPO)

HSP 1 Score: 145 bits (366), Expect = 3.430e-38
Identity = 67/108 (62.04%), Postives = 80/108 (74.07%), Query Frame = 0
Query:    2 PLTTLTKKDVPFVWSPACQSAFADLKQQFVSGPVLQHFDFDRPCRVETDASDFVCGGVLLQPDADNHWRPVAFFSSKMTPAECNYEIYDKELLAIIRALEVWRPELEG 109
            PLT LTKKD  F+W+  C+ AFADLKQ F S P+L+HFD D+P  VE D+SD+V  G L QPD      PVAFFS ++ PAECNY+IYDKEL+AI+RA E WR ELEG
Sbjct:  677 PLTRLTKKDTSFMWNTDCEKAFADLKQAFTSAPILRHFDPDKPSTVECDSSDYVNAGCLSQPDDAGILHPVAFFSRRLIPAECNYDIYDKELMAIVRAFEEWRAELEG 784          
BLAST of mRNA_P-canaliculata_contig9623.23663.1 vs. uniprot
Match: A0A1V6S1J8_9EURO (Uncharacterized protein n=1 Tax=Penicillium flavigenum TaxID=254877 RepID=A0A1V6S1J8_9EURO)

HSP 1 Score: 144 bits (364), Expect = 6.350e-38
Identity = 64/108 (59.26%), Postives = 80/108 (74.07%), Query Frame = 0
Query:    2 PLTTLTKKDVPFVWSPACQSAFADLKQQFVSGPVLQHFDFDRPCRVETDASDFVCGGVLLQPDADNHWRPVAFFSSKMTPAECNYEIYDKELLAIIRALEVWRPELEG 109
            PLT LTKKD PF W   CQ+AF  LK+ F S PVL+HFD D+P  +E D+SD+V  G L QPD +    PVAFFS K++PAECNY+IYDKEL+A++++ E WR ELEG
Sbjct:  353 PLTRLTKKDTPFTWDEKCQTAFEGLKEAFTSAPVLRHFDPDKPSTIECDSSDYVNAGCLSQPDLEGILHPVAFFSRKLSPAECNYDIYDKELMAVVQSFEEWRAELEG 460          
BLAST of mRNA_P-canaliculata_contig9623.23663.1 vs. uniprot
Match: A0A1B8AIZ9_FUSPO (RNA-directed DNA polymerase n=11 Tax=Fusarium poae TaxID=36050 RepID=A0A1B8AIZ9_FUSPO)

HSP 1 Score: 144 bits (362), Expect = 1.200e-37
Identity = 69/109 (63.30%), Postives = 77/109 (70.64%), Query Frame = 0
Query:    1 APLTTLTKKDVPFVWSPACQSAFADLKQQFVSGPVLQHFDFDRPCRVETDASDFVCGGVLLQPDADNHWRPVAFFSSKMTPAECNYEIYDKELLAIIRALEVWRPELEG 109
            APL  LTKKDVPFVW   C+ AF DLK  F S P+L+ FD+ +   +ETDASD+V  GVL Q D D    PVAFFS K T  ECNYEIYDKEL+AIIR  E WRPELEG
Sbjct:  968 APLNHLTKKDVPFVWDETCEKAFRDLKGAFTSAPILRPFDWTKDVILETDASDYVSAGVLSQYDDDGRLHPVAFFSKKHTSTECNYEIYDKELMAIIRCFEEWRPELEG 1076          
BLAST of mRNA_P-canaliculata_contig9623.23663.1 vs. uniprot
Match: A0A1B8A5D4_FUSPO (RNA-directed DNA polymerase n=3 Tax=Fusarium poae TaxID=36050 RepID=A0A1B8A5D4_FUSPO)

HSP 1 Score: 144 bits (362), Expect = 1.220e-37
Identity = 69/109 (63.30%), Postives = 77/109 (70.64%), Query Frame = 0
Query:    1 APLTTLTKKDVPFVWSPACQSAFADLKQQFVSGPVLQHFDFDRPCRVETDASDFVCGGVLLQPDADNHWRPVAFFSSKMTPAECNYEIYDKELLAIIRALEVWRPELEG 109
            APL  LTKKDVPFVW   C+ AF DLK  F S P+L+ FD+ +   +ETDASD+V  GVL Q D D    PVAFFS K T  ECNYEIYDKEL+AIIR  E WRPELEG
Sbjct: 2152 APLNHLTKKDVPFVWDETCEKAFRDLKGAFTSAPILRPFDWTKDVILETDASDYVSAGVLSQYDDDGRLHPVAFFSKKHTSTECNYEIYDKELMAIIRCFEEWRPELEG 2260          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9623.23663.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001D04FC082.750e-4166.67uncharacterized protein n=2 Tax=Cercospora kikuchi... [more]
U1GB49_ENDPU6.870e-4064.81Reverse transcriptase domain-containing protein n=... [more]
A0A0F8CN42_CERFI8.270e-4066.06RNA-directed DNA polymerase n=1 Tax=Ceratocystis f... [more]
A0A0D9NJD5_METAN3.880e-3963.89Uncharacterized protein n=1 Tax=Metarhizium anisop... [more]
A0A0G4PXS4_PENCA7.330e-3959.26RNA-directed DNA polymerase (Reverse transcriptase... [more]
UPI001D05406A2.540e-3862.39uncharacterized protein n=1 Tax=Morchella sextelat... [more]
A0A545VJN2_9HYPO3.430e-3862.04Retrovirus polyprotein n=1 Tax=Cordyceps javanica ... [more]
A0A1V6S1J8_9EURO6.350e-3859.26Uncharacterized protein n=1 Tax=Penicillium flavig... [more]
A0A1B8AIZ9_FUSPO1.200e-3763.30RNA-directed DNA polymerase n=11 Tax=Fusarium poae... [more]
A0A1B8A5D4_FUSPO1.220e-3763.30RNA-directed DNA polymerase n=3 Tax=Fusarium poae ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041577Reverse transcriptase/retrotransposon-derived protein, RNase H-like domainPFAMPF17919RT_RNaseH_2coord: 15..109
e-value: 1.1E-34
score: 118.4
NoneNo IPR availableGENE3D3.30.70.270coord: 1..36
e-value: 5.5E-30
score: 106.6
NoneNo IPR availableGENE3D3.10.20.370coord: 37..109
e-value: 5.5E-30
score: 106.6
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 1..100
NoneNo IPR availablePANTHERPTHR24559:SF300coord: 1..100
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 1..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9623contigP-canaliculata_contig9623:2141..2467 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9623.23663.1mRNA_P-canaliculata_contig9623.23663.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9623 2141..2467 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9623.23663.1 ID=prot_P-canaliculata_contig9623.23663.1|Name=mRNA_P-canaliculata_contig9623.23663.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=109bp
APLTTLTKKDVPFVWSPACQSAFADLKQQFVSGPVLQHFDFDRPCRVETD
ASDFVCGGVLLQPDADNHWRPVAFFSSKMTPAECNYEIYDKELLAIIRAL
EVWRPELEG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041577RT_RNaseH_2