prot_P-canaliculata_contig95150.23536.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig95150.23536.1
Unique Nameprot_P-canaliculata_contig95150.23536.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length261
Homology
BLAST of mRNA_P-canaliculata_contig95150.23536.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY)

HSP 1 Score: 200 bits (509), Expect = 6.080e-55
Identity = 115/299 (38.46%), Postives = 162/299 (54.18%), Query Frame = 0
Query:    1 FKRKVGQDGRVEKYKCRNVAKGFRQIKGIHFQESSSPTPTQSSIRMALAVVALLDWEGRQLDVERAFFEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVIVIVVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEMSYYLGCHITRDRKARTI--------------------------------------AEMRGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTY 261
            FK K G DG +EKYK R VAKGF Q++G+ F E+ +P    +S+R  LA+ A LD E  Q+DV+ AF   D+ EE+Y+++P G+  S + V +L KA+YGL  AG  W KK   E  A GF R  +D  VF +   G +++I+ +YVDD+L+LS+         EDL+S F + DLGE  + LG  ITRDR  R +                                      AE+   PY+  +G+LM+    TRPDLA+T   L++    PG EHW A+M+A +YL+ TA   + Y
Sbjct:  976 FKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPPGFHRSNSLVWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDG-ILLIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEITRDRPRRVLELSQHQYVEKCLAQHGMADCRPVSTPMAQNQKLVKLSEAEIDPKPYQSVLGSLMYAMIGTRPDLAFTVGALSQHAATPGKEHWIALMRAYRYLRGTADKKLVY 1273          
BLAST of mRNA_P-canaliculata_contig95150.23536.1 vs. uniprot
Match: A0A401H123_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H123_9APHY)

HSP 1 Score: 200 bits (508), Expect = 7.130e-55
Identity = 114/299 (38.13%), Postives = 162/299 (54.18%), Query Frame = 0
Query:    1 FKRKVGQDGRVEKYKCRNVAKGFRQIKGIHFQESSSPTPTQSSIRMALAVVALLDWEGRQLDVERAFFEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVIVIVVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEMSYYLGCHITRDRKARTI--------------------------------------AEMRGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTY 261
            FK K G DG +EKYK R VAKGF Q++G+ F E+ +P    +S+R  LA+ A LD E  Q+DV+ AF   D+ EE+Y+++P G+R S + + +L KA+YGL  AG  W KK   E  A GF R  +D  VF +   G +++I+ +YVDD+L+LS+         EDL+S F + DLGE  + LG  I RDR  R +                                      AE+   PY+ A+G+LM+    TRPDLA+T   L++    PG EHW A+M+  +YL+ TA   + Y
Sbjct:  653 FKIKRGLDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPSGFRRSNSLIWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDG-ILLIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEIARDRPRRVLELSQHQYVEKCLAQHGMANCRPVSTPMAQNQKLVKLSEAEIDPKPYQSALGSLMYAMIGTRPDLAFTVGALSQHAATPGKEHWIALMRVYRYLRGTADKKLVY 950          
BLAST of mRNA_P-canaliculata_contig95150.23536.1 vs. uniprot
Match: A0A6H5JTV6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV6_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 6.840e-53
Identity = 100/270 (37.04%), Postives = 160/270 (59.26%), Query Frame = 0
Query:    1 FKRKVGQDGRVEKYKCRNVAKGFRQIKGIHFQESSSPTPTQSSIRMALAVVALLDWEGRQLDVERAFFEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVIVIVVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEMSYYLGCHITRDRKART--IAEMRGI-------PYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTY 261
            F  K  ++G+++ +K R VA+GF QI  + +  SSSP P+ +SI++ LAV           DV++A+  A + EE++++LP G  D  +++ + ++A+YGL  +G  W       L+  GFE+ +ADPCVFR+     V++I+V+YVDD+LV   + +D  + L  L   FP K+LGE  ++ GC I RD +A T  I++   I       P REA+G+++WV+  +RPD+++    +A+    P   HW A+ K L YLK T  LG+TY
Sbjct:  588 FSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAG-SDEDCEELLASLNKKFPTKNLGECEWFDGCAIERDVEAGTLRISQTAYIDSMGEEWPAREAIGSMVWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY 856          
BLAST of mRNA_P-canaliculata_contig95150.23536.1 vs. uniprot
Match: H3G9E3_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G9E3_PHYRM)

HSP 1 Score: 186 bits (473), Expect = 2.150e-52
Identity = 112/303 (36.96%), Postives = 157/303 (51.82%), Query Frame = 0
Query:    1 FKRKVGQDGRVEKYKCRNVAKGFRQIKGIHFQESSSPTPTQSSIRMALAVVALLDWEGRQLDVERAFFEADVTEELYVELPDGYRDSPNQVGR--LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVIVIVVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEMSYYLGCHITRDRKARTI-----------AEMRGI-----------------------------PYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTY 261
            F+ K   +G V K+K R VAKG+ Q  GI F ++ +P   + SI  +LA  A  D E   +DV+ AF   DV EELY++ PDG+ D  N   +  L++A+YG   A   W+ K    L  +GF RS ADPCV+ R+   +   IVV+YVDDL++ S+TK+        L+  F IK+LGE+ Y LG  I R+R+ +TI           AE  G+                             PYRE VGALM++A  TRPD+A     +AKF +     HW A  + L+YLK T  +G+ +
Sbjct:   32 FRIKRDPNGNVVKFKARLVAKGYTQRPGIDFTDTFAPVAREESINASLATAAEEDMEAENVDVDTAFLYGDVEEELYMDQPDGFEDQSNPAMKCLLKQALYGTKQAARQWNSKLNKHLEDQGFRRSDADPCVYVRRSTDEYS-IVVIYVDDLMLFSKTKEHIESIKVALKKEFSIKELGELKYCLGIEIDRNREDKTILMNQRAYIKRLAEKFGVDKCKAVHTPADCNSKLVKMTEEEAFVAKYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDMGIVF 333          
BLAST of mRNA_P-canaliculata_contig95150.23536.1 vs. uniprot
Match: H3GJA9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJA9_PHYRM)

HSP 1 Score: 192 bits (489), Expect = 2.770e-52
Identity = 109/280 (38.93%), Postives = 154/280 (55.00%), Query Frame = 0
Query:    1 FKRKVGQDGRVEKYKCRNVAKGFRQIKGIHFQESSSPTPTQSSIRMALAVVALLDWEGRQLDVERAFFEADVTEELYVELPDGYRDSPNQVGR--LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVIVIVVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEMSYYLGCHITRDRKARTIAEMRGI-----------------PYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTY 261
            F+ K    G++ K+K R VAKGF Q  G+ + E+ +P   + SI  A+A+ A  D E   +DV+ AF   DV EELY++ PDG+ D  N   +  L +A+YG   A   W+ K    L  +GF RS ADPCV+ R+   K   I++VYVDDL++ S TK +  +  + L+  F IK+LGE+ Y LG  I R+R  +TI   +                   PYRE VGALM++A  TRPD+A     +AKF +     HW A  + L+YLK T  LG+ +
Sbjct:  835 FRIKRDPSGKIIKFKARLVAKGFTQCPGVDYTETFAPVARKESINTAVAIAAEEDMEAENVDVDTAFLYGDVEEELYMDQPDGFEDQVNPTKKCLLVQALYGTKQAARQWNSKLNKHLEGQGFHRSAADPCVYVRRSDSK-FSIIIVYVDDLMIFSRTKAEIGEIKKPLKREFSIKELGELKYCLGIEIHRNRDDKTIVMNQRANSKLVKPSEDEDFVPRYPYRELVGALMYLATCTRPDIAQAVGEVAKFCEWYNKSHWVAAKRILKYLKTTQDLGLVF 1113          
BLAST of mRNA_P-canaliculata_contig95150.23536.1 vs. uniprot
Match: A0A4Y2Q6W6_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2Q6W6_ARAVE)

HSP 1 Score: 184 bits (466), Expect = 5.390e-51
Identity = 109/306 (35.62%), Postives = 159/306 (51.96%), Query Frame = 0
Query:    1 FKRKVGQDGRVEKYKCRNVAKGFRQIKGIHFQESSSPTPTQSSIRMALAVVALLDWEGRQLDVERAFFEADVTEELYVELPDGYR--DSPNQVGR---LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVIVIVVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEMSYYLGCHITRDRK-------------------------------------ARTIAEMRG---IPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTY 261
            FK K    G +E+YK R VAKGF QI+G+ + E+ SP    +++R+ LA  A+ DWE  QLD   AF +  + EE+Y+++P+G    D  N  G+   L KA+ GL  +G +W +     L+   F +S  D C + +    K IVIV +YVDDLL+ S + + ++   E L S+F +KDLG  SY LG  I RDRK                                      ++IA M     +PY+ AVG+L++ A  TRPD+ YT + L +F  NP   HW AV + ++YL+ TA   + Y
Sbjct:   74 FKIKHNSKGEIERYKTRLVAKGFSQIEGVDYNETFSPVVRYATLRVLLAFAAIYDWEIDQLDAVIAFVQGTLDEEIYMKIPEGLNEYDQENLEGKVLKLNKALDGLKQSGRVWYQMLENGLVEMDFRQSSFDSCAYIKVDQNKDIVIVTIYVDDLLIFSNSVKLKNWVKEQLTSTFKMKDLGTASYCLGIKIERDRKNGYVSVNQTQYVEGVLRRYNMHESHPVTTPLDTNKSITKSIANMEDLTHVPYQMAVGSLLYAAQATRPDIGYTVNLLCQFCSNPSRTHWTAVKRIMRYLRGTAETLLNY 379          
BLAST of mRNA_P-canaliculata_contig95150.23536.1 vs. uniprot
Match: A0A1C7MSU6_GRIFR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Grifola frondosa TaxID=5627 RepID=A0A1C7MSU6_GRIFR)

HSP 1 Score: 184 bits (468), Expect = 6.150e-50
Identity = 109/299 (36.45%), Postives = 155/299 (51.84%), Query Frame = 0
Query:    1 FKRKVGQDGRVEKYKCRNVAKGFRQIKGIHFQESSSPTPTQSSIRMALAVVALLDWEGRQLDVERAFFEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVIVIVVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEMSYYLGCHITRDRKARTI--------------------------------------AEMRGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTY 261
            F+ K G DG +EKYK R VAKGF Q++G+ + ++ +P    +SIR  LA+ A LD E  Q+DV+ AF   ++ EE+++  P G++ + N V +L+KA+YGL  A   W KK   E  + GF RS AD  VF +   G V++IV VY+DD+L+   +         DL S + + DLGE    L   I RDR  RTI                                      AE+   PY+ A+G+LM+    TRPDLA+    L+K   +PG EHW A+M   +YL+ T  L + Y
Sbjct:  332 FRIKRGPDGEIEKYKARVVAKGFTQVEGVDYTDTFAPVTKFASIRALLALAAKLDLEIHQMDVKSAFLNGNLDEEIFMACPPGFQGARNIVWQLRKALYGLKQASREWYKKIRAEFESLGFTRSNADHSVFYKNEDG-VLLIVAVYIDDMLIFCNSLPAVEALKADLGSHYDMTDLGEARRILNIKIIRDRARRTIELTQRQYVESILTHQGMADCRPVSTPMAQNLKLLKLSDAEIDATPYQSALGSLMYAMLGTRPDLAFAVGALSKHAAHPGEEHWTALMHVYKYLRATTDLRLVY 629          
BLAST of mRNA_P-canaliculata_contig95150.23536.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 7.170e-50
Identity = 100/298 (33.56%), Postives = 158/298 (53.02%), Query Frame = 0
Query:    1 FKRKVGQDGRVEKYKCRNVAKGFRQIKGIHFQESSSPTPTQSSIRMALAVVALLDWEGRQLDVERAFFEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVIVIVVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEMSYYLGCHITRDRKARTIA-------------------------------------EMRGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTY 261
            F  K  ++G+++ +K R VA+GF QI  + +  SSSP P+ +SI++ LAV           DV++A+  A + EE++++LP G  D  +++ + ++A+YGL  +G  W       L+  GFE+ +ADPCVFR+     V++I+V+YVDD+LV   + +D  + L  L   FP K+LGE  ++ GC I RD +A T+                                      E    P REA+G++MWV+  +RPD+++    +A+    P   HW A+ K L YLK T  LG+TY
Sbjct:  788 FSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAG-SDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY 1084          
BLAST of mRNA_P-canaliculata_contig95150.23536.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 7.480e-50
Identity = 100/298 (33.56%), Postives = 158/298 (53.02%), Query Frame = 0
Query:    1 FKRKVGQDGRVEKYKCRNVAKGFRQIKGIHFQESSSPTPTQSSIRMALAVVALLDWEGRQLDVERAFFEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVIVIVVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEMSYYLGCHITRDRKARTIA-------------------------------------EMRGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTY 261
            F  K  ++G+++ +K R VA+GF QI  + +  SSSP P+ +SI++ LAV           DV++A+  A + EE++++LP G  D  +++ + ++A+YGL  +G  W       L+  GFE+ +ADPCVFR+     V++I+V+YVDD+LV   + +D  + L  L   FP K+LGE  ++ GC I RD +A T+                                      E    P REA+G++MWV+  +RPD+++    +A+    P   HW A+ K L YLK T  LG+TY
Sbjct: 1167 FSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAG-SDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY 1463          
BLAST of mRNA_P-canaliculata_contig95150.23536.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 7.520e-50
Identity = 100/298 (33.56%), Postives = 158/298 (53.02%), Query Frame = 0
Query:    1 FKRKVGQDGRVEKYKCRNVAKGFRQIKGIHFQESSSPTPTQSSIRMALAVVALLDWEGRQLDVERAFFEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVIVIVVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEMSYYLGCHITRDRKARTIA-------------------------------------EMRGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTY 261
            F  K  ++G+++ +K R VA+GF QI  + +  SSSP P+ +SI++ LAV           DV++A+  A + EE++++LP G  D  +++ + ++A+YGL  +G  W       L+  GFE+ +ADPCVFR+     V++I+V+YVDD+LV   + +D  + L  L   FP K+LGE  ++ GC I RD +A T+                                      E    P REA+G++MWV+  +RPD+++    +A+    P   HW A+ K L YLK T  LG+TY
Sbjct: 1187 FSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAG-SDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY 1483          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig95150.23536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A401G4V0_9APHY6.080e-5538.46Retrovirus-related Pol polyprotein from transposon... [more]
A0A401H123_9APHY7.130e-5538.13Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5JTV6_9PHAE6.840e-5337.04Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3G9E3_PHYRM2.150e-5236.96Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3GJA9_PHYRM2.770e-5238.93Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A4Y2Q6W6_ARAVE5.390e-5135.62Retrovirus-related Pol polyprotein from transposon... [more]
A0A1C7MSU6_GRIFR6.150e-5036.45Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5KSG8_9PHAE7.170e-5033.56Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE7.480e-5033.56Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE7.520e-5033.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 8..196
e-value: 2.3E-42
score: 145.3
NoneNo IPR availablePANTHERPTHR11439:SF267coord: 1..188
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 60..257
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig95150contigP-canaliculata_contig95150:3..917 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig95150.23536.1mRNA_P-canaliculata_contig95150.23536.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig95150 3..917 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig95150.23536.1 ID=prot_P-canaliculata_contig95150.23536.1|Name=mRNA_P-canaliculata_contig95150.23536.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=261bp
FKRKVGQDGRVEKYKCRNVAKGFRQIKGIHFQESSSPTPTQSSIRMALAV
VALLDWEGRQLDVERAFFEADVTEELYVELPDGYRDSPNQVGRLQKAMYG
LMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVIVIVVVYVDDL
LVLSETKQDEHQALEDLRSSFPIKDLGEMSYYLGCHITRDRKARTIAEMR
GIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQY
LKRTASLGVTY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like