prot_P-canaliculata_contig9469.23488.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9469.23488.1
Unique Nameprot_P-canaliculata_contig9469.23488.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length114
Homology
BLAST of mRNA_P-canaliculata_contig9469.23488.1 vs. uniprot
Match: A0A6H5JXI4_9PHAE (FA_desaturase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JXI4_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 1.100e-59
Identity = 88/114 (77.19%), Postives = 101/114 (88.60%), Query Frame = 0
Query:    1 TFDDEDFHFASAAMETVDRSYGWGIDDVHHNITDGHVVHHLFFTKIPHYNLKRATVALRPYLEALGVYRHRQNPHFLWVFVRESYRLGFYTHSKAHDHRAKMHFKDSSRKPGAK 114
            TFD+ DFHFA+AAMETVDR +GWGIDD HHNITDGHV HHLFFTKIPHYNL++AT A+RP LE LG+YR+R NP+FLWVF RE+Y+LGFYTHSKAHDHRAKMH+ D+SR P  K
Sbjct:  266 TFDNSDFHFATAAMETVDRKFGWGIDDAHHNITDGHVAHHLFFTKIPHYNLQKATAAIRPSLEKLGLYRYRNNPNFLWVFARENYKLGFYTHSKAHDHRAKMHYLDASRTPAFK 379          
BLAST of mRNA_P-canaliculata_contig9469.23488.1 vs. uniprot
Match: A0A835YPJ0_9STRA (Fatty acid desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPJ0_9STRA)

HSP 1 Score: 156 bits (394), Expect = 4.100e-44
Identity = 70/95 (73.68%), Postives = 82/95 (86.32%), Query Frame = 0
Query:    1 TFDDEDFHFASAAMETVDRSYGWGIDDVHHNITDGHVVHHLFFTKIPHYNLKRATVALRPYLEALGVYRHRQNPHFLWVFVRESYRLGFYTHSKA 95
            T+DD D+ FA AAMETVDR Y WG+DD+HHNITDGHVVHHLFFTKIPHYNL +AT ALRPYLE LGVYR+++NP FLW FV+ +Y+ G +THSKA
Sbjct:  267 TYDDADYSFAVAAMETVDRKYCWGVDDLHHNITDGHVVHHLFFTKIPHYNLMKATDALRPYLEGLGVYRYQRNPLFLWTFVQYNYKYGLFTHSKA 361          
BLAST of mRNA_P-canaliculata_contig9469.23488.1 vs. uniprot
Match: A0A7S4PZI0_9DINO (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A7S4PZI0_9DINO)

HSP 1 Score: 101 bits (251), Expect = 4.310e-23
Identity = 43/83 (51.81%), Postives = 66/83 (79.52%), Query Frame = 0
Query:    2 FDDEDFHFASAAMETVDRSYGWGIDDVHHNITDGHVVHHLFFTKIPHYNLKRATVALRPYLEALG--VYRHRQNPHFLWVFVR 82
            +D+ ++++   A ETVDR+YG+GIDD+HHNITDGHV+HH+FFT+IPHY+LK AT A+ P ++  G  +Y+H+++  FL+ + R
Sbjct:  281 YDEGEWNYLRGAFETVDRTYGFGIDDIHHNITDGHVLHHIFFTQIPHYHLKEATAAIVPVIQKYGKGLYKHQESRDFLYKYSR 363          
BLAST of mRNA_P-canaliculata_contig9469.23488.1 vs. uniprot
Match: A0A4Y5R1F4_9BILA (Fatty acid desaturase n=1 Tax=Mesorhabditis longespiculosa TaxID=473162 RepID=A0A4Y5R1F4_9BILA)

HSP 1 Score: 99.0 bits (245), Expect = 4.390e-22
Identity = 45/86 (52.33%), Postives = 64/86 (74.42%), Query Frame = 0
Query:    2 FDDEDFHFASAAMETVDRSYGWGIDDVHHNITDGHVVHHLFFTKIPHYNLKRATVALRPYLEALGVYRHRQNPHFLWVFVRESYRL 87
            F+D  + +    ++T+DR YG+GID + H+ITDGHV HHLFFT+IPHYNL +AT AL+  LE LGVYRH+++  FL+ F + + +L
Sbjct:  319 FEDGTWGYVKGQLQTIDRPYGFGIDQLMHHITDGHVAHHLFFTQIPHYNLMKATKALQEKLEPLGVYRHQKSHDFLYQFYQLNRKL 404          
BLAST of mRNA_P-canaliculata_contig9469.23488.1 vs. uniprot
Match: A0A4U8UWN0_STECR (FA_desaturase domain-containing protein n=2 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U8UWN0_STECR)

HSP 1 Score: 99.0 bits (245), Expect = 4.520e-22
Identity = 48/88 (54.55%), Postives = 61/88 (69.32%), Query Frame = 0
Query:    2 FDDEDFHFASAAMETVDRSYGWGIDDVHHNITDGHVVHHLFFTKIPHYNLKRATVALRPYLEALGVYRHRQNPHFLWVFVRESYRLGF 89
            ++D  + +    M+T+DR YG+GID + H+ITDGHV HHLFFTKIPHYNL +AT ALR  LE  GVYR R +  FL  F R + RL +
Sbjct:  324 YEDGTWGYVRGQMQTIDRPYGFGIDQLMHHITDGHVAHHLFFTKIPHYNLMKATKALRDKLEPFGVYRRRVSYDFLLEFCRLNMRLEY 411          
BLAST of mRNA_P-canaliculata_contig9469.23488.1 vs. uniprot
Match: A0A4D9DBT0_9STRA (FA_desaturase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBT0_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 6.670e-22
Identity = 44/84 (52.38%), Postives = 60/84 (71.43%), Query Frame = 0
Query:    6 DFHFASAAMETVDRSYGWGIDDVHHNITDGHVVHHLFFTKIPHYNLKRATVALRPYLEALGVYRHRQNPHFLWVFVRESYRLGF 89
            ++ +   A+ET+DR YG GIDD+ HNITDGHV HHLFFT+IPHY+LK AT A+R  L   G Y+ +Q+ +FL  F   +Y+L +
Sbjct:  226 EWSYIKGALETIDREYGMGIDDLSHNITDGHVAHHLFFTQIPHYHLKDATAAVRQLLTPTGTYKKKQSWNFLGKFTELNYKLKY 309          
BLAST of mRNA_P-canaliculata_contig9469.23488.1 vs. uniprot
Match: A0A1I7Y654_9BILA (FA_desaturase domain-containing protein n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I7Y654_9BILA)

HSP 1 Score: 99.0 bits (245), Expect = 6.680e-22
Identity = 47/81 (58.02%), Postives = 59/81 (72.84%), Query Frame = 0
Query:    9 FASAAMETVDRSYGWGIDDVHHNITDGHVVHHLFFTKIPHYNLKRATVALRPYLEALGVYRHRQNPHFLWVFVRESYRLGF 89
            +    M+TVDR YG+GID + H+ITDGHV HHLFFTKIPHY+L +AT A+R  LE  GVYRHR +  FL+ F R + RL +
Sbjct:  406 YVRGQMQTVDRPYGFGIDQLMHHITDGHVAHHLFFTKIPHYHLMKATEAIRSKLEPYGVYRHRVSYDFLFEFCRLNMRLEY 486          
BLAST of mRNA_P-canaliculata_contig9469.23488.1 vs. uniprot
Match: I2CR09_NANGC (Glycerolipid omega-3 fatty acid desaturase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR09_NANGC)

HSP 1 Score: 97.8 bits (242), Expect = 1.410e-21
Identity = 44/84 (52.38%), Postives = 60/84 (71.43%), Query Frame = 0
Query:    6 DFHFASAAMETVDRSYGWGIDDVHHNITDGHVVHHLFFTKIPHYNLKRATVALRPYLEALGVYRHRQNPHFLWVFVRESYRLGF 89
            ++ +   A+ET+DR YG GIDD+ HNITDGHV HHLFFT+IPHY+LK AT A+R  L   G Y+ +Q+ +FL  F   +Y+L +
Sbjct:  303 EWSYIKGALETIDREYGMGIDDLSHNITDGHVAHHLFFTQIPHYHLKDATAAVRQLLTPTGTYKKKQSWNFLGKFTELNYKLKY 386          
BLAST of mRNA_P-canaliculata_contig9469.23488.1 vs. uniprot
Match: A0A1S7C7R3_9STRA (Om n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A1S7C7R3_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.420e-21
Identity = 44/84 (52.38%), Postives = 61/84 (72.62%), Query Frame = 0
Query:    6 DFHFASAAMETVDRSYGWGIDDVHHNITDGHVVHHLFFTKIPHYNLKRATVALRPYLEALGVYRHRQNPHFLWVFVRESYRLGF 89
            ++++   A+ET+DR YG GIDD+ HNITDGHV HHLFFT+IPHY+L  AT A+R  L+  G Y+ R++ +FL  F   +YRL +
Sbjct:  253 EWNYIKGALETIDREYGMGIDDLSHNITDGHVAHHLFFTQIPHYHLTAATAAVRQCLQPTGTYKKRRSWNFLARFTELNYRLKY 336          
BLAST of mRNA_P-canaliculata_contig9469.23488.1 vs. uniprot
Match: A0A482S5W1_9ARCH (FA_desaturase domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S5W1_9ARCH)

HSP 1 Score: 95.5 bits (236), Expect = 6.250e-21
Identity = 44/80 (55.00%), Postives = 57/80 (71.25%), Query Frame = 0
Query:    2 FDDEDFHFASAAMETVDRSYGWGIDDVHHNITDGHVVHHLFFTKIPHYNLKRATVALRPYLEA---LGVYRHRQNPHFLW 78
            +D++D+ FA A +ETVDR YGWGID +HH IT+ HV HHLFFT+IPHYNL  AT  ++ YL A   L +YR  +  +F W
Sbjct:  287 YDEKDWKFAEAGLETVDREYGWGIDKLHHYITNHHVAHHLFFTQIPHYNLPLATEGIKKYLSAQNKLHLYRFEETHNFAW 366          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9469.23488.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXI4_9PHAE1.100e-5977.19FA_desaturase domain-containing protein n=2 Tax=Ec... [more]
A0A835YPJ0_9STRA4.100e-4473.68Fatty acid desaturase n=1 Tax=Tribonema minus TaxI... [more]
A0A7S4PZI0_9DINO4.310e-2351.81Hypothetical protein n=2 Tax=Sar TaxID=2698737 Rep... [more]
A0A4Y5R1F4_9BILA4.390e-2252.33Fatty acid desaturase n=1 Tax=Mesorhabditis longes... [more]
A0A4U8UWN0_STECR4.520e-2254.55FA_desaturase domain-containing protein n=2 Tax=St... [more]
A0A4D9DBT0_9STRA6.670e-2252.38FA_desaturase domain-containing protein n=1 Tax=Na... [more]
A0A1I7Y654_9BILA6.680e-2258.02FA_desaturase domain-containing protein n=1 Tax=St... [more]
I2CR09_NANGC1.410e-2152.38Glycerolipid omega-3 fatty acid desaturase (Fragme... [more]
A0A1S7C7R3_9STRA1.420e-2152.38Om n=1 Tax=Nannochloropsis oceanica TaxID=145522 R... [more]
A0A482S5W1_9ARCH6.250e-2155.00FA_desaturase domain-containing protein n=1 Tax=ar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR32100:SF0TEMPERATURE-SENSITIVE SN-2 ACYL-LIPID OMEGA-3 DESATURASE (FERREDOXIN), CHLOROPLASTICcoord: 2..86
NoneNo IPR availablePANTHERPTHR32100FAMILY NOT NAMEDcoord: 2..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9469contigP-canaliculata_contig9469:8998..9748 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9469.23488.1mRNA_P-canaliculata_contig9469.23488.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9469 8998..9748 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9469.23488.1 ID=prot_P-canaliculata_contig9469.23488.1|Name=mRNA_P-canaliculata_contig9469.23488.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=114bp
TFDDEDFHFASAAMETVDRSYGWGIDDVHHNITDGHVVHHLFFTKIPHYN
LKRATVALRPYLEALGVYRHRQNPHFLWVFVRESYRLGFYTHSKAHDHRA
KMHFKDSSRKPGAK
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