prot_P-canaliculata_contig94519.23472.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig94519.23472.1
Unique Nameprot_P-canaliculata_contig94519.23472.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length356
Homology
BLAST of mRNA_P-canaliculata_contig94519.23472.1 vs. uniprot
Match: A0A2P6SP23_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6SP23_ROSCH)

HSP 1 Score: 254 bits (648), Expect = 3.100e-72
Identity = 136/359 (37.88%), Postives = 209/359 (58.22%), Query Frame = 0
Query:    1 EPTTLREAKASPEWPQWRGALRREMNGQITRDVWKVVDRPKGKTILGTKTVFKRKVGQDGRVEKYKCRFVAKGVRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEAGVTEELYVELPDGYRDSPNQ--VGRLQKAMYGLMHAGLLWSKKFGGEMIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVTERFEIRKTSVIPVPTGKT-PLSRADGPQNDAEMTEMRGIPYREAAGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQHLKRTASLGVTY 356
            EP    EAK   +  +W  A++ EM   +  D +++V+ PKG+  L  K VFK K  ++ ++ K+K R V KG  Q +GI + E  SP    +SIR+ L + A +D E  QLDV+ AFL   + EE+Y+E P+G+     Q  V +L+K++YGL  A   W KKF   M+  G++R+ ADPCV+ ++  G   +I+++YVDD+L++ +     H+   DL  SF +KDLG     LG  ITRDR+A+ +   Q+RY + V ERF +++   +  P G    LSR   P    E  +M GIPY  A G+LM+    TRPD+A+    ++++  NPG EHW+AV   L++L+ T+ L + +
Sbjct:  820 EPECFEEAKTHADCDKWMLAMKSEMESLLKNDTYELVELPKGRKALKNKWVFKLKRDENEQLTKFKARLVVKGFGQKEGIDFDEIFSPVVKMTSIRIILGMAASMDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVEGKQHMVCKLKKSLYGLKQAPRQWYKKFDSFMVGHGYKRTDADPCVYLQRFTGGNFIILLLYVDDMLIVGKDVSMIHKLKADLSKSFDMKDLGPAKQILGMEITRDRQAKKLWLSQERYVERVLERFNMKEAKSVSSPLGNHFKLSRLSCPTTQVEKDKMAGIPYSSAVGSLMYAMVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILKYLRGTSKLCLCF 1178          
BLAST of mRNA_P-canaliculata_contig94519.23472.1 vs. uniprot
Match: A0A2P6Q6P3_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6Q6P3_ROSCH)

HSP 1 Score: 240 bits (612), Expect = 1.670e-71
Identity = 128/339 (37.76%), Postives = 199/339 (58.70%), Query Frame = 0
Query:   21 LRREMNGQITRDVWKVVDRPKGKTILGTKTVFKRKVGQDGRVEKYKCRFVAKGVRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEAGVTEELYVELPDGYRDSPNQ--VGRLQKAMYGLMHAGLLWSKKFGGEMIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVTERFEIRKTSVIPVPTGKT-PLSRADGPQNDAEMTEMRGIPYREAAGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQHLKRTASLGVTY 356
            ++ EM   +  D +++V+ PKG+  L  K VFK K  ++ ++ K+K R V KG  Q +GI + E  SP    +SIR+ L + A +D E  QLDV+ AFL   + EE+Y+E P+G+     Q  V +L+K++YGL  A   W KKF   M+  G++R+ ADPCV+ ++  G   +I+++YVDD+L++ +      +   DL  SF +KDLG     LG  ITRDR+A+ +   Q+RY + V ERF +++   +  P G    LSR   P    E  +M GIPY  A G+LM+    TRPD+A+    ++++  NPG EHW+AV   L++L+ T+ L + +
Sbjct:    1 MKSEMESLLKNDTYELVELPKGRKALKNKWVFKLKRDENEQLTKFKARLVVKGFGQKEGIDFDEIFSPVVKMTSIRIILGMAASMDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVERKQHMVCKLKKSLYGLKQAPRQWYKKFDSFMVGHGYKRTDADPCVYLQRFTGGNFIILLLYVDDMLIVGKDVSMIRKLKADLSKSFDMKDLGPAKQILGMEITRDRQAKKLWLSQERYVERVLERFNMKEAKSVSSPLGNHFKLSRLSCPTTQVEKDKMAGIPYSSAVGSLMYAMVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILKYLRGTSKLCLCF 339          
BLAST of mRNA_P-canaliculata_contig94519.23472.1 vs. uniprot
Match: A0A4S4LPF2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4LPF2_9AGAM)

HSP 1 Score: 241 bits (615), Expect = 4.480e-69
Identity = 129/352 (36.65%), Postives = 196/352 (55.68%), Query Frame = 0
Query:    1 EPTTLREAKASPEWPQWRGALRREMNGQITRDVWKVVDRPKGKTILGTKTVFKRKVGQDGRVEKYKCRFVAKGVRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEAGVTEELYVELPDGYRD--SPNQVGRLQKAMYGLMHAGLLWSKKFGGEMIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVTERFEIRKTSVIPVPTGKT-PLSRADGPQNDAEMTEMRGIPYREAAGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQHLKRT 349
            EP  + EA+   +W  W  A++ E+        W++VDRP    ++G+K VFK K G DG + KYK R VA+G  Q+ GI Y ++ +P     SIR  LA+ A  DWE  Q+DV+ A+L   + E +++E P G+    +  +V  L K +YGL  +   W KK     +  GF R   D  VF  K +GK +++I   VDDL + S   +      ++L  +F + DLGEIS+ LG  I RD+KARTV   Q+ +  T+  RF +     +  P   + PL++   P    +  EMRG+P++EA G++M+ A  TRPD+A++   L++F  NPG  HW+ V + L++LK T
Sbjct:  347 EPRNVTEARRGSDWSHWEAAMKTELGMIEKLGTWELVDRPSDANVVGSKWVFKIKRGADGEIIKYKARLVAQGFTQVPGIDYSDTFAPVAKLESIRALLAIAARNDWEIHQMDVKNAYLNGDLEETIFMEQPPGFTTPGAAEKVCHLFKTIYGLKQSSRRWYKKLCDAFLKLGFTRCSVDHGVFW-KCVGKDILVIAASVDDLAIFSSALRLLESLKDELNKAFEMTDLGEISWLLGIEIRRDQKARTVALSQRAFIDTIVSRFNLENAKPLSTPLDPSFPLNKTQCPSTPRQYEEMRGVPFQEAIGSVMYAARRTRPDIAFSVTYLSQFMQNPGKAHWEGVKRVLRYLKGT 697          
BLAST of mRNA_P-canaliculata_contig94519.23472.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 244 bits (623), Expect = 7.920e-69
Identity = 127/356 (35.67%), Postives = 204/356 (57.30%), Query Frame = 0
Query:    1 EPTTLREAKASPEWPQWRGALRREMNGQITRDVWKVVDRPKGKTILGTKTVFKRKVGQDGRVEKYKCRFVAKGVRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEAGVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGEMIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVTERFEIRKTSVIPVPTGKTPLSRADGPQNDAEMTEMRGIPYREAAGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQHLKRTASLGVTY 356
            EP +L EA+ASPEWP+W  A++ E +       W++ D PK +  +G K VF+RK  ++G+V KYK R VA+G  QI G+ + E+ +P     SIR  LA+  + +WE  Q+DV+ A+L   + EE+Y+  P+G+ D   ++ RL+K +YGL  +G  W++K   E+   G++R +ADPCV+  +     V II V+VDDLL+ + + +   +   DL+  F + DLGE    +G  I RDR+A  +   QQ Y +++ +R+++   + + +P        A+    +A+     G  Y    G+LM+ A  TRPD++Y   TL+K+   P P HW A  + L++L  T  L +TY
Sbjct:  906 EPRSLAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGKIQISQQHYIESILKRYQLENANAVGMPLDPNVAFTAEDENEEADDRLAGG--YASMVGSLMYAAVGTRPDISYAVQTLSKYTACPRPVHWTAAKRVLRYLAGTRDLHITY 1259          
BLAST of mRNA_P-canaliculata_contig94519.23472.1 vs. uniprot
Match: A0A5N6M1Y8_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6M1Y8_9ASTR)

HSP 1 Score: 235 bits (599), Expect = 1.010e-68
Identity = 130/360 (36.11%), Postives = 208/360 (57.78%), Query Frame = 0
Query:    1 EPTTLREAKASPEWPQWRGALRREMNGQITRDVWKVVDRPKGKTILGTKTVFKRKVGQDGRVEKYKCRFVAKGVRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEAGVTEELYVELPDGY--RDSPNQVGRLQKAMYGLMHAGLLWSKKFGGEMIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVTERFEIRKTS--VIPVPTGKTPLSRADGPQNDAEMTEMRGIPYREAAGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQHLKRTASLGVTY 356
            +PTT ++A    +  QW  A++ E+    T +VW + + P G   +G K V+K K+  +G +E+YK R VAKG  Q +GI YQE+ SP   + S+R+ +A++A  D E  Q+DV+ AFL   + E+++++ P+G+  +   + V +L K++YGL  A   W  KF   M    F ++Q D C++  K  G   VI+V+YVDD+L+ S      +++   L ++F +KDLGE SY +G  I R+R   T+   Q+ Y + + +RF +++ S  V PV  G         P+++AE+ +MR IPY    G+LM+    TRPD+AY    L ++  NPG +HWKA  K L++L+ T    +TY
Sbjct:  109 DPTTFKDAMNCDQSTQWLDAMKDELKSMKTNNVWTLTELPTGAKPVGCKWVYKTKLDPNGNIERYKARLVAKGYTQREGIDYQETFSPVSRKDSLRIVMALVAHFDLELHQMDVKTAFLNGDLHEDVFMKQPEGFEPKGKEHMVCKLNKSIYGLKQASRQWYIKFDEVMKKHNFIKNQVDQCIYL-KISGSKFVILVLYVDDILLASNNLDMLYESKRLLSANFDMKDLGEASYVIGIEIHRNRSIGTLGLSQKAYIERILKRFNMQQCSPSVAPVVKGDN-FGSYQCPKSEAEIDQMRLIPYASVVGSLMYAQVCTRPDIAYITGMLGRYQSNPGLDHWKAAKKVLRYLQGTKEYKLTY 466          
BLAST of mRNA_P-canaliculata_contig94519.23472.1 vs. uniprot
Match: A0A4Q3DG62_9RICK (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Rickettsiaceae bacterium TaxID=2023360 RepID=A0A4Q3DG62_9RICK)

HSP 1 Score: 236 bits (601), Expect = 2.020e-68
Identity = 131/360 (36.39%), Postives = 206/360 (57.22%), Query Frame = 0
Query:    1 EPTTLREAKASPEWPQWRGALRREMNGQITRDVWKVVDRPKGKTILGTKTVFKRKVGQDGRVEKYKCRFVAKGVRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEAGVTEELYVELPDGY--RDSPNQVGRLQKAMYGLMHAGLLWSKKFGGEMIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVTERFEIRKTS--VIPVPTGKTPLSRADGPQNDAEMTEMRGIPYREAAGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQHLKRTASLGVTY 356
            +P +  +A    +  +W  A+  E+    +  VW +VD P+    +G K ++KRK G DG+VE +K R VAKG  Q +GI Y E+ SP     SIR+ LA+ A  D+E  Q+DV+ AFL   + EE+Y+  PDG+  +   ++V +L K++YGL  A   W+++F   +   GFE++ ++PCV+  K+  KVVV +V+YVDD+L++    +      E L   F +KDLG  ++ LG  I RDRK + +   Q  Y   V  RF ++     ++P+ +GK  LS+   P+   E+ +M  +PY  A G+LM+    TRPD+ Y    ++++  NPG EHW AV   L++LKRT  + + Y
Sbjct:  132 DPVSFNDAMVDLDKEKWLEAMNLEIESMHSNSVWTLVDAPEQIRPIGCKWIYKRKKGADGQVETFKARLVAKGFTQREGIDYDETFSPVAMFKSIRILLAIAAHYDYEIWQMDVKTAFLNGYLEEEIYMAQPDGFIEKGQEHKVCKLLKSIYGLKQASRSWNQRFDEVIKTYGFEQNLSEPCVY--KYSKKVVVFLVLYVDDILLIGSDIKVMSDIKEWLAKQFQMKDLGNAAFVLGIQIIRDRKNKLLALSQGTYIDKVLSRFSMQNAHGVLLPIRSGKF-LSKEQCPKTPQEVEDMSRVPYASAVGSLMYAMLCTRPDICYAVGVVSRYQSNPGQEHWIAVKHILKYLKRTRDMMLVY 488          
BLAST of mRNA_P-canaliculata_contig94519.23472.1 vs. uniprot
Match: A0A5A7QRB1_STRAF (Gag-pol polyprotein n=2 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QRB1_STRAF)

HSP 1 Score: 243 bits (619), Expect = 2.320e-68
Identity = 134/360 (37.22%), Postives = 206/360 (57.22%), Query Frame = 0
Query:    1 EPTTLREAKASPEWPQWRGALRREMNGQITRDVWKVVDRPKGKTILGTKTVFKRKVGQDGRVEKYKCRFVAKGVRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEAGVTEELYVELPDGY--RDSPNQVGRLQKAMYGLMHAGLLWSKKFGGEMIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVTERFEIR--KTSVIPVPTGKTPLSRADGPQNDAEMTEMRGIPYREAAGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQHLKRTASLGVTY 356
            +P T  EA    +   W  A++ EM    +  VW +V+ P G   +G K ++KRK G DG+V+ +K R VAKG  QI+GI Y E+ SP     SIR+ LAV A +D+E  Q+DV+ AFL   + E++Y++ P+G+      + V +L +++YGL  A   W+ +F   + + GF +   + CV++ K  G VVV +V+YVDD+L++  +K++       L   F +KDLGE  + LG  + RDRK R +   Q  Y  TV  RF ++  K  ++P   G  PLS+   P+   E+ EM+ +PY  A G+LM+    TRPD++Y    +A++  NPG EHW AV   L++L+RT    + Y
Sbjct:  791 DPRTYDEALQDKDADSWNVAMKAEMGSMDSNQVWDLVELPDGVRPIGCKWIYKRKRGLDGKVQTFKARLVAKGYTQIEGIDYDETFSPVAMLKSIRILLAVAAHMDYEVWQMDVKTAFLNGNLQEDIYMQQPEGFIAEGREHLVCKLNRSIYGLKQASRSWNIRFDEVIQSYGFTQCPDEHCVYK-KISGSVVVFLVLYVDDILLIGNSKKELSDVKVWLSKQFDMKDLGEAGHILGIRLIRDRKKRMLCLSQSSYIDTVLARFSMQDSKKGMLPFRHG-IPLSKEMSPKTSKEIEEMKTVPYASAVGSLMYAMLCTRPDISYAVGMVARYQSNPGREHWSAVKHILKYLRRTKEYMLVY 1148          
BLAST of mRNA_P-canaliculata_contig94519.23472.1 vs. uniprot
Match: A0A015J5I9_RHIIW (Gag-pol fusion protein n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015J5I9_RHIIW)

HSP 1 Score: 241 bits (616), Expect = 6.050e-68
Identity = 131/356 (36.80%), Postives = 201/356 (56.46%), Query Frame = 0
Query:    1 EPTTLREAKASPEWPQWRGALRREMNGQITRDVWKVVDRPKGKTILGTKTVFKRKVGQDGRVEKYKCRFVAKGVRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEAGVTEELYVELPDGYRDS--PNQVGRLQKAMYGLMHAGLLWSKKFGGEMIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVTERFEIR--KTSVIPVPTGKTPLSRADGPQNDAEMTEMRGIPYREAAGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQHLKRTASL 352
            EP   +EA A PE  +W+ A+  E+       VW +VD   G+  +G K +FK+K   DG+V  +K R VAKG  Q  G+ Y E+ SP     SIR+ LA+ A  D+E  Q+DV+ AFL   +TE++Y+  P+G+ D+  PN+V +L++++YGL  A   W+  F  ++   GF RS+ + CV+  K  G +V  +V+YVDD+L++             L   F +KDLGE +Y LG  I RDRK R +   Q  Y + V +RF +   K   +P+ +    LS+   P  D E+ EM  +PY  A G++M+    TRPD+A+    ++++  NPG  HW AV   L++L+RT ++
Sbjct:  777 EPANYQEAVAGPESAKWKEAMDSEIKSMYDNQVWNLVDNVPGRKTVGCKWIFKKKTDMDGKVHTFKARLVAKGFTQTPGVDYDETFSPVAKIKSIRIMLAIAAFHDYEIWQMDVKTAFLNGKLTEDVYMNQPEGFVDAKYPNKVCKLERSIYGLKQASRSWNLCFHEKVKEFGFSRSEDESCVYV-KASGSIVTFLVLYVDDILLMGNDIPTLQDVKAWLGKCFAMKDLGEAAYILGIRILRDRKKRLIGLSQGTYLEKVLKRFSMENSKKGELPIQSNAK-LSKTQSPSTDEEIAEMSRVPYASAVGSIMYAMTCTRPDVAFALSMVSRYQGNPGRAHWIAVKNILKYLRRTKNM 1130          
BLAST of mRNA_P-canaliculata_contig94519.23472.1 vs. uniprot
Match: UPI001378C744 (hypothetical protein n=1 Tax=Weizmannia coagulans TaxID=1398 RepID=UPI001378C744)

HSP 1 Score: 225 bits (574), Expect = 2.130e-67
Identity = 126/341 (36.95%), Postives = 198/341 (58.06%), Query Frame = 0
Query:   20 ALRREMNGQITRDVWKVVDRPKGKTILGTKTVFKRKVGQDGRVEKYKCRFVAKGVRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEAGVTEELYVELPDGY--RDSPNQVGRLQKAMYGLMHAGLLWSKKFGGEMIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVTERFEIR--KTSVIPVPTGKTPLSRADGPQNDAEMTEMRGIPYREAAGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQHLKRTASLGVTY 356
            A++ E++   +  VW +V  P G   +  K V+KRK G DG+VE +K R VAKG  Q +GI Y E+ SP     SIR+ L++ A  D+E  Q+DV+ AFL   + EE+Y+  P+G+  ++  + V +L++++YGL  A   W+ +F   + + GFE++  +PCV++R H  KVV+ +V+YVDD+L++             L S F +KDLGE ++ LG  + RDRK + +   Q  Y   V E F ++  K  ++P   G  PLS    P+   E   MR +PY  A G+LM+    TRPD+ Y+   ++++  NPGP+HW+AV   L++L+RT    + Y
Sbjct:    1 AMKSELDSMYSNHVWDLVKAPNGIKPVDCKWVYKRKRGIDGKVETFKARLVAKGYTQKEGIDYDETFSPVAMLKSIRILLSIAAHYDYEIWQMDVKTAFLNGNLEEEIYMMQPEGFIAKNQEHMVCKLKRSIYGLKQASRSWNIRFDQAIKSFGFEQNLDEPCVYKR-HRDKVVMFLVLYVDDILLIGNDVGVMSSVKVWLSSQFDMKDLGEANFILGIKLWRDRKNKMLGLSQTGYIDKVLEWFSMQNSKKGLLPFRHG-VPLSDDQRPKTQEEENMMRQVPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGPKHWQAVKHILKYLRRTRDYMLVY 339          
BLAST of mRNA_P-canaliculata_contig94519.23472.1 vs. uniprot
Match: UPI001F00A048 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F00A048)

HSP 1 Score: 239 bits (611), Expect = 2.170e-67
Identity = 133/358 (37.15%), Postives = 205/358 (57.26%), Query Frame = 0
Query:    1 EPTTLREAKASPEWPQWRGALRREMNGQITRDVWKVVDRPKGKTILGTKTVFKRKVGQDGRVEKYKCRFVAKGVRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEAGVTEELYVELPDGYRDS-PNQVGRLQKAMYGLMHAGLLWSKKFGGEMIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVTERFEIRKTSVIPVPTGKT-PLSRADGPQNDAEMTEMRGIPYREAAGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQHLKRTASLGVTY 356
            EP    EA +  +  +W  A++ EM        +++V+ P+GK  L  K VFK K     +V KYK R V KG +Q KGI + E  SP    +SIR+ L ++A ++ E  Q+DV+ AFL  G+ EE+Y+E P+G+  S  N V +L+K++YGL  A   W KKF   M ++G++++ AD CV+ +K      V +++YVDD+L++ +  +  +Q  ++L  SF +KDLG     LG  ITRDRK R +   Q++Y + V  RF +     + +P      LS+   P +  E+ EM  +PY  A G+LM+    TRPD+A+    +++F  NPG EHW+AV   L++LK T  L + Y
Sbjct:  645 EPENFHEAVSHKDKEKWFLAMQDEMESLQKNQTYEIVELPRGKKALKNKWVFKLKKDGSEKVVKYKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGMVASMNLELEQMDVKTAFLHGGLDEEIYMEQPEGFEVSGDNLVCKLKKSLYGLKQAPRQWYKKFDSCMTSQGYKKTSADECVYIQKFSDGNFVALLLYVDDILIVGKDAKKINQLKKELSKSFDMKDLGPAQQILGMQITRDRKNRRLWLSQEKYIERVLARFNMNNAKPVSIPLANHFKLSKRSCPSSKEEIGEMSSVPYSSAVGSLMYAMVCTRPDIAHAVGKVSRFLSNPGKEHWEAVKWILRYLKGTIKLCLCY 1002          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig94519.23472.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2P6SP23_ROSCH3.100e-7237.88Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]
A0A2P6Q6P3_ROSCH1.670e-7137.76Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]
A0A4S4LPF2_9AGAM4.480e-6936.65Integrase catalytic domain-containing protein n=1 ... [more]
A0A401GYH9_9APHY7.920e-6935.67Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
A0A5N6M1Y8_9ASTR1.010e-6836.11Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Q3DG62_9RICK2.020e-6836.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5A7QRB1_STRAF2.320e-6837.22Gag-pol polyprotein n=2 Tax=Striga asiatica TaxID=... [more]
A0A015J5I9_RHIIW6.050e-6836.80Gag-pol fusion protein n=1 Tax=Rhizophagus irregul... [more]
UPI001378C7442.130e-6736.95hypothetical protein n=1 Tax=Weizmannia coagulans ... [more]
UPI001F00A0482.170e-6737.15DDE-type integrase/transposase/recombinase n=1 Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 33..273
e-value: 1.2E-51
score: 175.8
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 1..322
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 111..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig94519contigP-canaliculata_contig94519:28..1095 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig94519.23472.1mRNA_P-canaliculata_contig94519.23472.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig94519 28..1095 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig94519.23472.1 ID=prot_P-canaliculata_contig94519.23472.1|Name=mRNA_P-canaliculata_contig94519.23472.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=356bp
EPTTLREAKASPEWPQWRGALRREMNGQITRDVWKVVDRPKGKTILGTKT
VFKRKVGQDGRVEKYKCRFVAKGVRQIKGIHYQESSSPTPTQSSIRMALA
VMALLDWEGRQLDVEMAFLEAGVTEELYVELPDGYRDSPNQVGRLQKAMY
GLMHAGLLWSKKFGGEMIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDD
LLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKARTVMFD
QQRYAQTVTERFEIRKTSVIPVPTGKTPLSRADGPQNDAEMTEMRGIPYR
EAAGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQHLKRTA
SLGVTY
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2