mRNA_P-canaliculata_contig94519.23472.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig94519.23472.1
Unique NamemRNA_P-canaliculata_contig94519.23472.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig94519.23472.1 vs. uniprot
Match: A0A4S4LPF2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4LPF2_9AGAM)

HSP 1 Score: 241 bits (615), Expect = 4.480e-69
Identity = 129/352 (36.65%), Postives = 196/352 (55.68%), Query Frame = 1
Query:    1 EPTTLREAKASPEWPQWRGALRREMNGQITRDVWKVVDRPKGKTILGTKTVFKRKVGQDGRVEKYKCRFVAKGVRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEAGVTEELYVELPDGYRD--SPNQVGRLQKAMYGLMHAGLLWSKKFGGEMIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVTERFEIRKTSVIPVPTGKT-PLSRADGPQNDAEMTEMRGIPYREAAGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQHLKRT 1047
            EP  + EA+   +W  W  A++ E+        W++VDRP    ++G+K VFK K G DG + KYK R VA+G  Q+ GI Y ++ +P     SIR  LA+ A  DWE  Q+DV+ A+L   + E +++E P G+    +  +V  L K +YGL  +   W KK     +  GF R   D  VF  K +GK +++I   VDDL + S   +      ++L  +F + DLGEIS+ LG  I RD+KARTV   Q+ +  T+  RF +     +  P   + PL++   P    +  EMRG+P++EA G++M+ A  TRPD+A++   L++F  NPG  HW+ V + L++LK T
Sbjct:  347 EPRNVTEARRGSDWSHWEAAMKTELGMIEKLGTWELVDRPSDANVVGSKWVFKIKRGADGEIIKYKARLVAQGFTQVPGIDYSDTFAPVAKLESIRALLAIAARNDWEIHQMDVKNAYLNGDLEETIFMEQPPGFTTPGAAEKVCHLFKTIYGLKQSSRRWYKKLCDAFLKLGFTRCSVDHGVFW-KCVGKDILVIAASVDDLAIFSSALRLLESLKDELNKAFEMTDLGEISWLLGIEIRRDQKARTVALSQRAFIDTIVSRFNLENAKPLSTPLDPSFPLNKTQCPSTPRQYEEMRGVPFQEAIGSVMYAARRTRPDIAFSVTYLSQFMQNPGKAHWEGVKRVLRYLKGT 697          
BLAST of mRNA_P-canaliculata_contig94519.23472.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 244 bits (623), Expect = 7.920e-69
Identity = 127/356 (35.67%), Postives = 204/356 (57.30%), Query Frame = 1
Query:    1 EPTTLREAKASPEWPQWRGALRREMNGQITRDVWKVVDRPKGKTILGTKTVFKRKVGQDGRVEKYKCRFVAKGVRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEAGVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGEMIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVTERFEIRKTSVIPVPTGKTPLSRADGPQNDAEMTEMRGIPYREAAGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQHLKRTASLGVTY 1068
            EP +L EA+ASPEWP+W  A++ E +       W++ D PK +  +G K VF+RK  ++G+V KYK R VA+G  QI G+ + E+ +P     SIR  LA+  + +WE  Q+DV+ A+L   + EE+Y+  P+G+ D   ++ RL+K +YGL  +G  W++K   E+   G++R +ADPCV+  +     V II V+VDDLL+ + + +   +   DL+  F + DLGE    +G  I RDR+A  +   QQ Y +++ +R+++   + + +P        A+    +A+     G  Y    G+LM+ A  TRPD++Y   TL+K+   P P HW A  + L++L  T  L +TY
Sbjct:  906 EPRSLAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGKIQISQQHYIESILKRYQLENANAVGMPLDPNVAFTAEDENEEADDRLAGG--YASMVGSLMYAAVGTRPDISYAVQTLSKYTACPRPVHWTAAKRVLRYLAGTRDLHITY 1259          
BLAST of mRNA_P-canaliculata_contig94519.23472.1 vs. uniprot
Match: A0A5N6M1Y8_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6M1Y8_9ASTR)

HSP 1 Score: 235 bits (599), Expect = 1.010e-68
Identity = 130/360 (36.11%), Postives = 208/360 (57.78%), Query Frame = 1
Query:    1 EPTTLREAKASPEWPQWRGALRREMNGQITRDVWKVVDRPKGKTILGTKTVFKRKVGQDGRVEKYKCRFVAKGVRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEAGVTEELYVELPDGY--RDSPNQVGRLQKAMYGLMHAGLLWSKKFGGEMIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVTERFEIRKTS--VIPVPTGKTPLSRADGPQNDAEMTEMRGIPYREAAGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQHLKRTASLGVTY 1068
            +PTT ++A    +  QW  A++ E+    T +VW + + P G   +G K V+K K+  +G +E+YK R VAKG  Q +GI YQE+ SP   + S+R+ +A++A  D E  Q+DV+ AFL   + E+++++ P+G+  +   + V +L K++YGL  A   W  KF   M    F ++Q D C++  K  G   VI+V+YVDD+L+ S      +++   L ++F +KDLGE SY +G  I R+R   T+   Q+ Y + + +RF +++ S  V PV  G         P+++AE+ +MR IPY    G+LM+    TRPD+AY    L ++  NPG +HWKA  K L++L+ T    +TY
Sbjct:  109 DPTTFKDAMNCDQSTQWLDAMKDELKSMKTNNVWTLTELPTGAKPVGCKWVYKTKLDPNGNIERYKARLVAKGYTQREGIDYQETFSPVSRKDSLRIVMALVAHFDLELHQMDVKTAFLNGDLHEDVFMKQPEGFEPKGKEHMVCKLNKSIYGLKQASRQWYIKFDEVMKKHNFIKNQVDQCIYL-KISGSKFVILVLYVDDILLASNNLDMLYESKRLLSANFDMKDLGEASYVIGIEIHRNRSIGTLGLSQKAYIERILKRFNMQQCSPSVAPVVKGDN-FGSYQCPKSEAEIDQMRLIPYASVVGSLMYAQVCTRPDIAYITGMLGRYQSNPGLDHWKAAKKVLRYLQGTKEYKLTY 466          
BLAST of mRNA_P-canaliculata_contig94519.23472.1 vs. uniprot
Match: A0A4Q3DG62_9RICK (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Rickettsiaceae bacterium TaxID=2023360 RepID=A0A4Q3DG62_9RICK)

HSP 1 Score: 236 bits (601), Expect = 2.020e-68
Identity = 131/360 (36.39%), Postives = 206/360 (57.22%), Query Frame = 1
Query:    1 EPTTLREAKASPEWPQWRGALRREMNGQITRDVWKVVDRPKGKTILGTKTVFKRKVGQDGRVEKYKCRFVAKGVRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEAGVTEELYVELPDGY--RDSPNQVGRLQKAMYGLMHAGLLWSKKFGGEMIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVTERFEIRKTS--VIPVPTGKTPLSRADGPQNDAEMTEMRGIPYREAAGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQHLKRTASLGVTY 1068
            +P +  +A    +  +W  A+  E+    +  VW +VD P+    +G K ++KRK G DG+VE +K R VAKG  Q +GI Y E+ SP     SIR+ LA+ A  D+E  Q+DV+ AFL   + EE+Y+  PDG+  +   ++V +L K++YGL  A   W+++F   +   GFE++ ++PCV+  K+  KVVV +V+YVDD+L++    +      E L   F +KDLG  ++ LG  I RDRK + +   Q  Y   V  RF ++     ++P+ +GK  LS+   P+   E+ +M  +PY  A G+LM+    TRPD+ Y    ++++  NPG EHW AV   L++LKRT  + + Y
Sbjct:  132 DPVSFNDAMVDLDKEKWLEAMNLEIESMHSNSVWTLVDAPEQIRPIGCKWIYKRKKGADGQVETFKARLVAKGFTQREGIDYDETFSPVAMFKSIRILLAIAAHYDYEIWQMDVKTAFLNGYLEEEIYMAQPDGFIEKGQEHKVCKLLKSIYGLKQASRSWNQRFDEVIKTYGFEQNLSEPCVY--KYSKKVVVFLVLYVDDILLIGSDIKVMSDIKEWLAKQFQMKDLGNAAFVLGIQIIRDRKNKLLALSQGTYIDKVLSRFSMQNAHGVLLPIRSGKF-LSKEQCPKTPQEVEDMSRVPYASAVGSLMYAMLCTRPDICYAVGVVSRYQSNPGQEHWIAVKHILKYLKRTRDMMLVY 488          
BLAST of mRNA_P-canaliculata_contig94519.23472.1 vs. uniprot
Match: A0A5A7QRB1_STRAF (Gag-pol polyprotein n=2 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QRB1_STRAF)

HSP 1 Score: 243 bits (619), Expect = 2.320e-68
Identity = 134/360 (37.22%), Postives = 206/360 (57.22%), Query Frame = 1
Query:    1 EPTTLREAKASPEWPQWRGALRREMNGQITRDVWKVVDRPKGKTILGTKTVFKRKVGQDGRVEKYKCRFVAKGVRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEAGVTEELYVELPDGY--RDSPNQVGRLQKAMYGLMHAGLLWSKKFGGEMIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVTERFEIR--KTSVIPVPTGKTPLSRADGPQNDAEMTEMRGIPYREAAGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQHLKRTASLGVTY 1068
            +P T  EA    +   W  A++ EM    +  VW +V+ P G   +G K ++KRK G DG+V+ +K R VAKG  QI+GI Y E+ SP     SIR+ LAV A +D+E  Q+DV+ AFL   + E++Y++ P+G+      + V +L +++YGL  A   W+ +F   + + GF +   + CV++ K  G VVV +V+YVDD+L++  +K++       L   F +KDLGE  + LG  + RDRK R +   Q  Y  TV  RF ++  K  ++P   G  PLS+   P+   E+ EM+ +PY  A G+LM+    TRPD++Y    +A++  NPG EHW AV   L++L+RT    + Y
Sbjct:  791 DPRTYDEALQDKDADSWNVAMKAEMGSMDSNQVWDLVELPDGVRPIGCKWIYKRKRGLDGKVQTFKARLVAKGYTQIEGIDYDETFSPVAMLKSIRILLAVAAHMDYEVWQMDVKTAFLNGNLQEDIYMQQPEGFIAEGREHLVCKLNRSIYGLKQASRSWNIRFDEVIQSYGFTQCPDEHCVYK-KISGSVVVFLVLYVDDILLIGNSKKELSDVKVWLSKQFDMKDLGEAGHILGIRLIRDRKKRMLCLSQSSYIDTVLARFSMQDSKKGMLPFRHG-IPLSKEMSPKTSKEIEEMKTVPYASAVGSLMYAMLCTRPDISYAVGMVARYQSNPGREHWSAVKHILKYLRRTKEYMLVY 1148          
BLAST of mRNA_P-canaliculata_contig94519.23472.1 vs. uniprot
Match: A0A015J5I9_RHIIW (Gag-pol fusion protein n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015J5I9_RHIIW)

HSP 1 Score: 241 bits (616), Expect = 6.050e-68
Identity = 131/356 (36.80%), Postives = 201/356 (56.46%), Query Frame = 1
Query:    1 EPTTLREAKASPEWPQWRGALRREMNGQITRDVWKVVDRPKGKTILGTKTVFKRKVGQDGRVEKYKCRFVAKGVRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEAGVTEELYVELPDGYRDS--PNQVGRLQKAMYGLMHAGLLWSKKFGGEMIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVTERFEIR--KTSVIPVPTGKTPLSRADGPQNDAEMTEMRGIPYREAAGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQHLKRTASL 1056
            EP   +EA A PE  +W+ A+  E+       VW +VD   G+  +G K +FK+K   DG+V  +K R VAKG  Q  G+ Y E+ SP     SIR+ LA+ A  D+E  Q+DV+ AFL   +TE++Y+  P+G+ D+  PN+V +L++++YGL  A   W+  F  ++   GF RS+ + CV+  K  G +V  +V+YVDD+L++             L   F +KDLGE +Y LG  I RDRK R +   Q  Y + V +RF +   K   +P+ +    LS+   P  D E+ EM  +PY  A G++M+    TRPD+A+    ++++  NPG  HW AV   L++L+RT ++
Sbjct:  777 EPANYQEAVAGPESAKWKEAMDSEIKSMYDNQVWNLVDNVPGRKTVGCKWIFKKKTDMDGKVHTFKARLVAKGFTQTPGVDYDETFSPVAKIKSIRIMLAIAAFHDYEIWQMDVKTAFLNGKLTEDVYMNQPEGFVDAKYPNKVCKLERSIYGLKQASRSWNLCFHEKVKEFGFSRSEDESCVYV-KASGSIVTFLVLYVDDILLMGNDIPTLQDVKAWLGKCFAMKDLGEAAYILGIRILRDRKKRLIGLSQGTYLEKVLKRFSMENSKKGELPIQSNAK-LSKTQSPSTDEEIAEMSRVPYASAVGSIMYAMTCTRPDVAFALSMVSRYQGNPGRAHWIAVKNILKYLRRTKNM 1130          
BLAST of mRNA_P-canaliculata_contig94519.23472.1 vs. uniprot
Match: UPI001378C744 (hypothetical protein n=1 Tax=Weizmannia coagulans TaxID=1398 RepID=UPI001378C744)

HSP 1 Score: 225 bits (574), Expect = 2.130e-67
Identity = 126/341 (36.95%), Postives = 198/341 (58.06%), Query Frame = 1
Query:   58 ALRREMNGQITRDVWKVVDRPKGKTILGTKTVFKRKVGQDGRVEKYKCRFVAKGVRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEAGVTEELYVELPDGY--RDSPNQVGRLQKAMYGLMHAGLLWSKKFGGEMIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVTERFEIR--KTSVIPVPTGKTPLSRADGPQNDAEMTEMRGIPYREAAGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQHLKRTASLGVTY 1068
            A++ E++   +  VW +V  P G   +  K V+KRK G DG+VE +K R VAKG  Q +GI Y E+ SP     SIR+ L++ A  D+E  Q+DV+ AFL   + EE+Y+  P+G+  ++  + V +L++++YGL  A   W+ +F   + + GFE++  +PCV++R H  KVV+ +V+YVDD+L++             L S F +KDLGE ++ LG  + RDRK + +   Q  Y   V E F ++  K  ++P   G  PLS    P+   E   MR +PY  A G+LM+    TRPD+ Y+   ++++  NPGP+HW+AV   L++L+RT    + Y
Sbjct:    1 AMKSELDSMYSNHVWDLVKAPNGIKPVDCKWVYKRKRGIDGKVETFKARLVAKGYTQKEGIDYDETFSPVAMLKSIRILLSIAAHYDYEIWQMDVKTAFLNGNLEEEIYMMQPEGFIAKNQEHMVCKLKRSIYGLKQASRSWNIRFDQAIKSFGFEQNLDEPCVYKR-HRDKVVMFLVLYVDDILLIGNDVGVMSSVKVWLSSQFDMKDLGEANFILGIKLWRDRKNKMLGLSQTGYIDKVLEWFSMQNSKKGLLPFRHG-VPLSDDQRPKTQEEENMMRQVPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGPKHWQAVKHILKYLRRTRDYMLVY 339          
BLAST of mRNA_P-canaliculata_contig94519.23472.1 vs. uniprot
Match: UPI001F00A048 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F00A048)

HSP 1 Score: 239 bits (611), Expect = 2.170e-67
Identity = 133/358 (37.15%), Postives = 205/358 (57.26%), Query Frame = 1
Query:    1 EPTTLREAKASPEWPQWRGALRREMNGQITRDVWKVVDRPKGKTILGTKTVFKRKVGQDGRVEKYKCRFVAKGVRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEAGVTEELYVELPDGYRDS-PNQVGRLQKAMYGLMHAGLLWSKKFGGEMIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVTERFEIRKTSVIPVPTGKT-PLSRADGPQNDAEMTEMRGIPYREAAGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQHLKRTASLGVTY 1068
            EP    EA +  +  +W  A++ EM        +++V+ P+GK  L  K VFK K     +V KYK R V KG +Q KGI + E  SP    +SIR+ L ++A ++ E  Q+DV+ AFL  G+ EE+Y+E P+G+  S  N V +L+K++YGL  A   W KKF   M ++G++++ AD CV+ +K      V +++YVDD+L++ +  +  +Q  ++L  SF +KDLG     LG  ITRDRK R +   Q++Y + V  RF +     + +P      LS+   P +  E+ EM  +PY  A G+LM+    TRPD+A+    +++F  NPG EHW+AV   L++LK T  L + Y
Sbjct:  645 EPENFHEAVSHKDKEKWFLAMQDEMESLQKNQTYEIVELPRGKKALKNKWVFKLKKDGSEKVVKYKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGMVASMNLELEQMDVKTAFLHGGLDEEIYMEQPEGFEVSGDNLVCKLKKSLYGLKQAPRQWYKKFDSCMTSQGYKKTSADECVYIQKFSDGNFVALLLYVDDILIVGKDAKKINQLKKELSKSFDMKDLGPAQQILGMQITRDRKNRRLWLSQEKYIERVLARFNMNNAKPVSIPLANHFKLSKRSCPSSKEEIGEMSSVPYSSAVGSLMYAMVCTRPDIAHAVGKVSRFLSNPGKEHWEAVKWILRYLKGTIKLCLCY 1002          
BLAST of mRNA_P-canaliculata_contig94519.23472.1 vs. uniprot
Match: A0A5N6NCI1_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NCI1_9ASTR)

HSP 1 Score: 227 bits (579), Expect = 2.250e-67
Identity = 129/359 (35.93%), Postives = 201/359 (55.99%), Query Frame = 1
Query:    1 EPTTLREAKASPEWPQWRGALRREMNGQITRDVWKVVDRPKGKTILGTKTVFKRKVGQDGRVEKYKCRFVAKGVRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEAGVTEELYVELPDGYRDSPNQ--VGRLQKAMYGLMHAGLLWSKKFGGEMIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVTERFEIRKTSVIPVPTGKTPL-SRADGPQNDAEMTEMRGIPYREAAGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQHLKRTASLGVTY 1068
            +P++  EA  S +  +W  A+  E+      +VW++V+   G   +G K V+K K+  +G VE++K R VAKG  Q +GI YQE+ SP   + S+R+ +A++A  D E  Q+DV+ AFL   + E++Y+  P+G++    +  V +L+K+ YGL  A   W  KF   M   GF  +Q D C +  K  G    I+V+YVDD+L+ S +    H++   L S+F +KDLGE SY +G  I RDR + T+   Q+ Y   V  R+ ++  S +  P  K  +      P+ + E  +MR IPY    G++M+    TRPD+AY A  L ++  NPG +HWKA  K L++L+ T    +TY
Sbjct:   35 DPSSYNEAITSDQSSEWHNAMIDELESMDKNNVWELVELLNGAKPVGCKWVYKTKLDPNGNVERFKARLVAKGYTQKEGIDYQETFSPVSQKDSLRIVMALVAHFDLELHQMDVKTAFLNGELYEDVYMTQPEGFKPKGKEHLVCKLKKSTYGLKQASRQWYLKFDEVMKKHGFVMNQVDQCNYL-KMSGSNFAILVIYVDDILLASNSLDMLHESKRLLSSNFDMKDLGEASYVIGIEIHRDRASGTLGLSQKAYINRVLTRYNMQHCSPLVAPVVKGDVFGTFQCPKTEVEKEQMRLIPYASVVGSIMYANVCTRPDIAYIAGMLGRYQSNPGLDHWKATKKVLRYLQGTKDYKLTY 392          
BLAST of mRNA_P-canaliculata_contig94519.23472.1 vs. uniprot
Match: A0A0A9WI29_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9WI29_LYGHE)

HSP 1 Score: 226 bits (575), Expect = 3.670e-67
Identity = 120/351 (34.19%), Postives = 200/351 (56.98%), Query Frame = 1
Query:    1 EPTTLREAKASPEWPQWRGALRREMNGQITRDVWKVVDRPKGKTILGTKTVFKRKVGQDGRVEKYKCRFVAKGVRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEAGVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGEMIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVTERFEIR--KTSVIPVPTGKTPLSRADGPQNDAEMTEMRGIPYREAAGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQHLKRT 1047
            EP T ++A   PE   W+ A+  E+       VW+  + P GKT +G+K VFK K   DG VE+YK R VA+G  Q  G+ Y+E+ SP  +  +IR+   +    +W   Q+DV+ A+L   + EE+Y++ PDG   +  +V RL +++YGL  +G  W +K   +++  G  + +++PC++ R+   + V II+VYVDDL+++S +++   +  E LR +F +KDLGE++Y LG  + +   +  +  +Q +Y + +   F +   K+   P+ T    + +   P++D E  EM  +PYR   G LM+++  TRPDL +    L +F  NPG  HW A  + L++LK T
Sbjct:   25 EPKTFKQAMEGPESDLWKAAMEEELTSLEVMKVWEFTELPPGKTAIGSKWVFKIKYMADGTVERYKARLVAQGFTQKPGVDYEETYSPVISLPAIRLLFKLAVNNNWIIHQMDVKTAYLNGELKEEIYMKCPDGITGAEGKVCRLLRSLYGLKQSGRSWYEKLDEKLLEGGMNKCKSEPCIYYRR-CNENVKIILVYVDDLILISSSEECMVEMKEMLRRNFDMKDLGELNYILGIEVKKGDHS--LRLNQVKYIKEILSEFNMSDCKSVSTPMETNYN-IGKQHCPKSDEERKEMEKVPYRRLVGKLMYLSQATRPDLGFAVSKLGQFSSNPGKVHWMAAKRELRYLKGT 371          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig94519.23472.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4S4LPF2_9AGAM4.480e-6936.65Integrase catalytic domain-containing protein n=1 ... [more]
A0A401GYH9_9APHY7.920e-6935.67Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
A0A5N6M1Y8_9ASTR1.010e-6836.11Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Q3DG62_9RICK2.020e-6836.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5A7QRB1_STRAF2.320e-6837.22Gag-pol polyprotein n=2 Tax=Striga asiatica TaxID=... [more]
A0A015J5I9_RHIIW6.050e-6836.80Gag-pol fusion protein n=1 Tax=Rhizophagus irregul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig94519contigP-canaliculata_contig94519:28..1095 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score237.3
Seed ortholog evalue1.1e-59
Seed eggNOG ortholog65672.G4TWW2
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs227R3@155619,38DPC@33154,3H58M@355688,3NUZ7@4751,3UY7N@5204,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelAgaricomycetes incertae sedis
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size1068
Cds size1068
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817311.6196508-CDS-P-canaliculata_contig94519:27..10951622817311.6196508-CDS-P-canaliculata_contig94519:27..1095Pelvetia canaliculata dioeciousCDSP-canaliculata_contig94519 28..1095 -
1693495216.3137748-CDS-P-canaliculata_contig94519:27..10951693495216.3137748-CDS-P-canaliculata_contig94519:27..1095Pelvetia canaliculata dioeciousCDSP-canaliculata_contig94519 28..1095 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig94519.23472.1prot_P-canaliculata_contig94519.23472.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig94519 28..1095 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig94519.23472.1

>prot_P-canaliculata_contig94519.23472.1 ID=prot_P-canaliculata_contig94519.23472.1|Name=mRNA_P-canaliculata_contig94519.23472.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=356bp
EPTTLREAKASPEWPQWRGALRREMNGQITRDVWKVVDRPKGKTILGTKT
VFKRKVGQDGRVEKYKCRFVAKGVRQIKGIHYQESSSPTPTQSSIRMALA
VMALLDWEGRQLDVEMAFLEAGVTEELYVELPDGYRDSPNQVGRLQKAMY
GLMHAGLLWSKKFGGEMIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDD
LLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKARTVMFD
QQRYAQTVTERFEIRKTSVIPVPTGKTPLSRADGPQNDAEMTEMRGIPYR
EAAGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQHLKRTA
SLGVTY
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mRNA from alignment at P-canaliculata_contig94519:28..1095-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig94519.23472.1 ID=mRNA_P-canaliculata_contig94519.23472.1|Name=mRNA_P-canaliculata_contig94519.23472.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1068bp|location=Sequence derived from alignment at P-canaliculata_contig94519:28..1095- (Pelvetia canaliculata dioecious)
GAGCCCACCACCCTGCGCGAGGCTAAGGCGTCCCCAGAGTGGCCGCAATG GCGCGGCGCGCTCAGGCGCGAGATGAACGGCCAGATTACGCGTGATGTGT GGAAAGTCGTCGATCGACCCAAAGGAAAAACCATACTTGGCACCAAGACC GTTTTTAAACGGAAGGTCGGCCAGGATGGCCGTGTAGAAAAGTACAAGTG CCGCTTCGTGGCCAAGGGTGTCCGCCAGATCAAGGGGATTCATTACCAAG AGTCATCGTCGCCGACACCTACACAATCGAGCATCCGTATGGCCCTGGCG GTGATGGCCCTGTTGGACTGGGAGGGGCGGCAGCTTGACGTAGAAATGGC GTTTCTCGAAGCGGGTGTTACGGAGGAGCTCTACGTCGAGCTCCCCGACG GGTATCGCGACTCGCCGAACCAGGTTGGACGACTGCAGAAGGCCATGTAC GGCCTGATGCACGCCGGACTACTGTGGTCGAAAAAGTTCGGCGGAGAGAT GATAGCGAAGGGGTTCGAGAGGTCCCAAGCCGATCCTTGCGTGTTCCGGC GGAAGCATCTAGGGAAAGTAGTCGTCATCATCGTGGTCTACGTCGACGAT CTACTAGTGCTGAGCGAAACGAAGCAGGACGAGCATCAGGCGCTGGAAGA CCTTCGATCCAGCTTCCCTATCAAGGATCTGGGGGAAATCTCGTACTACC TGGGATGTCACATTACTCGGGATCGCAAGGCGAGGACGGTGATGTTCGAT CAGCAGCGTTACGCGCAGACGGTAACAGAGCGATTCGAAATTCGGAAGAC AAGCGTGATCCCTGTTCCTACGGGGAAAACGCCACTTTCGAGGGCAGACG GACCGCAAAACGACGCTGAGATGACAGAGATGCGTGGTATCCCGTATCGC GAGGCAGCGGGGGCACTAATGTGGGTAGCCAACATGACTCGGCCTGACCT AGCTTACACCGCGCACACGCTCGCCAAGTTCGGTGACAACCCCGGGCCCG AGCACTGGAAGGCAGTAATGAAAGCGCTACAGCACCTGAAACGAACGGCG AGCCTAGGGGTAACATAT
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Coding sequence (CDS) from alignment at P-canaliculata_contig94519:28..1095-

>mRNA_P-canaliculata_contig94519.23472.1 ID=mRNA_P-canaliculata_contig94519.23472.1|Name=mRNA_P-canaliculata_contig94519.23472.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2136bp|location=Sequence derived from alignment at P-canaliculata_contig94519:28..1095- (Pelvetia canaliculata dioecious)
GAGCCCACCACCCTGCGCGAGGCTAAGGCGTCCCCAGAGTGGCCGCAATG
GCGCGGCGCGCTCAGGCGCGAGATGAACGGCCAGATTACGCGTGATGTGT
GGAAAGTCGTCGATCGACCCAAAGGAAAAACCATACTTGGCACCAAGACC
GTTTTTAAACGGAAGGTCGGCCAGGATGGCCGTGTAGAAAAGTACAAGTG
CCGCTTCGTGGCCAAGGGTGTCCGCCAGATCAAGGGGATTCATTACCAAG
AGTCATCGTCGCCGACACCTACACAATCGAGCATCCGTATGGCCCTGGCG
GTGATGGCCCTGTTGGACTGGGAGGGGCGGCAGCTTGACGTAGAAATGGC
GTTTCTCGAAGCGGGTGTTACGGAGGAGCTCTACGTCGAGCTCCCCGACG
GGTATCGCGACTCGCCGAACCAGGTTGGACGACTGCAGAAGGCCATGTAC
GGCCTGATGCACGCCGGACTACTGTGGTCGAAAAAGTTCGGCGGAGAGAT
GATAGCGAAGGGGTTCGAGAGGTCCCAAGCCGATCCTTGCGTGTTCCGGC
GGAAGCATCTAGGGAAAGTAGTCGTCATCATCGTGGTCTACGTCGACGAT
CTACTAGTGCTGAGCGAAACGAAGCAGGACGAGCATCAGGCGCTGGAAGA
CCTTCGATCCAGCTTCCCTATCAAGGATCTGGGGGAAATCTCGTACTACC
TGGGATGTCACATTACTCGGGATCGCAAGGCGAGGACGGTGATGTTCGAT
CAGCAGCGTTACGCGCAGACGGTAACAGAGCGATTCGAAATTCGGAAGAC
AAGCGTGATCCCTGTTCCTACGGGGAAAACGCCACTTTCGAGGGCAGACG
GACCGCAAAACGACGCTGAGATGACAGAGATGCGTGGTATCCCGTATCGC
GAGGCAGCGGGGGCACTAATGTGGGTAGCCAACATGACTCGGCCTGACCT
AGCTTACACCGCGCACACGCTCGCCAAGTTCGGTGACAACCCCGGGCCCG
AGCACTGGAAGGCAGTAATGAAAGCGCTACAGCACCTGAAACGAACGGCG
AGCCTAGGGGTAACATATGAGCCCACCACCCTGCGCGAGGCTAAGGCGTC
CCCAGAGTGGCCGCAATGGCGCGGCGCGCTCAGGCGCGAGATGAACGGCC
AGATTACGCGTGATGTGTGGAAAGTCGTCGATCGACCCAAAGGAAAAACC
ATACTTGGCACCAAGACCGTTTTTAAACGGAAGGTCGGCCAGGATGGCCG
TGTAGAAAAGTACAAGTGCCGCTTCGTGGCCAAGGGTGTCCGCCAGATCA
AGGGGATTCATTACCAAGAGTCATCGTCGCCGACACCTACACAATCGAGC
ATCCGTATGGCCCTGGCGGTGATGGCCCTGTTGGACTGGGAGGGGCGGCA
GCTTGACGTAGAAATGGCGTTTCTCGAAGCGGGTGTTACGGAGGAGCTCT
ACGTCGAGCTCCCCGACGGGTATCGCGACTCGCCGAACCAGGTTGGACGA
CTGCAGAAGGCCATGTACGGCCTGATGCACGCCGGACTACTGTGGTCGAA
AAAGTTCGGCGGAGAGATGATAGCGAAGGGGTTCGAGAGGTCCCAAGCCG
ATCCTTGCGTGTTCCGGCGGAAGCATCTAGGGAAAGTAGTCGTCATCATC
GTGGTCTACGTCGACGATCTACTAGTGCTGAGCGAAACGAAGCAGGACGA
GCATCAGGCGCTGGAAGACCTTCGATCCAGCTTCCCTATCAAGGATCTGG
GGGAAATCTCGTACTACCTGGGATGTCACATTACTCGGGATCGCAAGGCG
AGGACGGTGATGTTCGATCAGCAGCGTTACGCGCAGACGGTAACAGAGCG
ATTCGAAATTCGGAAGACAAGCGTGATCCCTGTTCCTACGGGGAAAACGC
CACTTTCGAGGGCAGACGGACCGCAAAACGACGCTGAGATGACAGAGATG
CGTGGTATCCCGTATCGCGAGGCAGCGGGGGCACTAATGTGGGTAGCCAA
CATGACTCGGCCTGACCTAGCTTACACCGCGCACACGCTCGCCAAGTTCG
GTGACAACCCCGGGCCCGAGCACTGGAAGGCAGTAATGAAAGCGCTACAG
CACCTGAAACGAACGGCGAGCCTAGGGGTAACATAT
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