prot_P-canaliculata_contig9444.23465.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9444.23465.1
Unique Nameprot_P-canaliculata_contig9444.23465.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length116
Homology
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BLAST of mRNA_P-canaliculata_contig9444.23465.1 vs. uniprot
Match: D7FZ15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ15_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 1.510e-22
Identity = 53/69 (76.81%), Postives = 60/69 (86.96%), Query Frame = 0 
Query:   48 GTHGDQWEAMWAHGFSDEEAAIAADERAYERTVRDRRRFAQQEKSEQEEFLRERERQKAMHKMFGKRVR 116
            G  G+ W AMWA GFSDE+ AIAADERAYERTVRDR+ FAQQE+SEQE FLRERERQKA+H+MFGK+ R
Sbjct: 1010 GLQGEPWVAMWAQGFSDEDEAIAADERAYERTVRDRQSFAQQERSEQEAFLRERERQKALHQMFGKKYR 1078
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BLAST of mRNA_P-canaliculata_contig9444.23465.1 vs. uniprot
Match: A0A6H5KQ85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ85_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 9.080e-19
Identity = 53/87 (60.92%), Postives = 60/87 (68.97%), Query Frame = 0 
Query:   48 GTHGDQWEAMWAHGFSDEEAAIA------------------ADERAYERTVRDRRRFAQQEKSEQEEFLRERERQKAMHKMFGKRVR 116
            G  G+ W AMWA GFSDE+ AIA                  ADERAYERTVRDR+ FAQQE+SEQE FLRERERQKA+H+MFGK+ R
Sbjct: 1252 GLQGEPWAAMWAQGFSDEDEAIADDLSCRDFPYSHRGQAIAADERAYERTVRDRQSFAQQERSEQEAFLRERERQKALHQMFGKKYR 1338
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9444.23465.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZ15_ECTSI1.510e-2276.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQ85_9PHAE9.080e-1960.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9444contigP-canaliculata_contig9444:1567..3637 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9444.23465.1mRNA_P-canaliculata_contig9444.23465.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9444 1567..3637 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9444.23465.1 ID=prot_P-canaliculata_contig9444.23465.1|Name=mRNA_P-canaliculata_contig9444.23465.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=116bp
GKRRAKARRGARDEEAKAGGRGDGSGGGSGDVLTNHRTPKKRPRKRGGTH
GDQWEAMWAHGFSDEEAAIAADERAYERTVRDRRRFAQQEKSEQEEFLRE
RERQKAMHKMFGKRVR
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