prot_P-canaliculata_contig101428.234.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig101428.234.1
Unique Nameprot_P-canaliculata_contig101428.234.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length146
Homology
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BLAST of mRNA_P-canaliculata_contig101428.234.1 vs. uniprot
Match: A0A7X0LKU8_9BACT (PilZ domain-containing protein n=1 Tax=Algisphaera agarilytica TaxID=1385975 RepID=A0A7X0LKU8_9BACT)

HSP 1 Score: 92.8 bits (229), Expect = 3.120e-20
Identity = 50/128 (39.06%), Postives = 75/128 (58.59%), Query Frame = 0 
Query:   11 LKRAWTEALIALSGQNTPLQVVPMSEQGEAMPQARLRLL-AQRDDGGLVIECPRGPGPASALRPGVEVVLYLMHGTQRMKAGSRVVDRDPHALNAEMTVPAASLEPSYDVASAQRRECYRLPTGHLDL 137
            ++  W   +  L+ QN  ++V P++E+GE +P  R RLL A   DG L++E P     A  +  GV V +Y++ G+ RMKA SRV+D    +LN +  V A  LEP   ++SAQRR C+RL T  + +
Sbjct:   10 IETTWHTTVAELASQNKTVEVRPLTERGEELPSFRARLLQADEKDGSLIVEKPANVEQAQVIAKGVAVQVYVITGSTRMKADSRVIDVGRFSLNKQTKVMAVRLEPMKKISSAQRRACFRLSTAGMGM 137
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig101428.234.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7X0LKU8_9BACT3.120e-2039.06PilZ domain-containing protein n=1 Tax=Algisphaera... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig101428contigP-canaliculata_contig101428:426..863 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig101428.234.1mRNA_P-canaliculata_contig101428.234.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig101428 426..863 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig101428.234.1 ID=prot_P-canaliculata_contig101428.234.1|Name=mRNA_P-canaliculata_contig101428.234.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=146bp
MKQSPAQSDRLKRAWTEALIALSGQNTPLQVVPMSEQGEAMPQARLRLLA
QRDDGGLVIECPRGPGPASALRPGVEVVLYLMHGTQRMKAGSRVVDRDPH
ALNAEMTVPAASLEPSYDVASAQRRECYRLPTGHLDLPPVRLTPLV
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