prot_P-canaliculata_contig9357.23365.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-canaliculata_contig9357.23365.1
Unique Name	prot_P-canaliculata_contig9357.23365.1
Type	polypeptide
Organism	Pelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length	148

Homology

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BLAST of mRNA_P-canaliculata_contig9357.23365.1 vs. uniprot
Match: D7G8X7_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8X7_ECTSI)

HSP 1 Score: 269 bits (687), Expect = 8.260e-91
Identity = 127/144 (88.19%), Postives = 134/144 (93.06%), Query Frame = 0

Query:    4 ELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQASTMLQEPHADNPLEADIARQLAEDKNAFDQTARKWTHDFASP 147
            EL ELRKNKLEWC+IQP DDDI+RW AMLVGP+DTPF GGCFNLEIEFPAEYPFKAPKV+F TRIYHPNVKTD+GEICSDILNENWGPTLNVTYVLNTIRQ   MLQEPHADNPLEADIARQLAEDK+AF QTA+KWT DFASP
Sbjct:    8 ELAELRKNKLEWCDIQPMDDDIMRWTAMLVGPDDTPFGGGCFNLEIEFPAEYPFKAPKVRFVTRIYHPNVKTDSGEICSDILNENWGPTLNVTYVLNTIRQ---MLQEPHADNPLEADIARQLAEDKDAFTQTAKKWTLDFASP 148

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BLAST of mRNA_P-canaliculata_contig9357.23365.1 vs. uniprot
Match: A0A6V1MVK4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1MVK4_HETAK)

HSP 1 Score: 203 bits (517), Expect = 6.440e-65
Identity = 94/143 (65.73%), Postives = 115/143 (80.42%), Query Frame = 0

Query:    4 ELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQASTMLQEPHADNPLEADIARQLAEDKNAFDQTARKWTHDFAS 146
            EL  L K  L++    PA DDI++W AMLVGP +TP+ GG FNLE++FPAEYPFKAPKVKF TRIYHPN+KTD+GEIC+D++NENWGPTLN  YVL  I+Q   +L+EP AD+PLEADI RQL ED+NAF +TA KWT D+A+
Sbjct:    8 ELQALEKAPLDFVTAGPAGDDIMKWQAMLVGPANTPYEGGVFNLELDFPAEYPFKAPKVKFLTRIYHPNIKTDSGEICADLINENWGPTLNTQYVLTVIKQ---LLEEPSADSPLEADIGRQLTEDENAFKETAAKWTADYAT 147

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BLAST of mRNA_P-canaliculata_contig9357.23365.1 vs. uniprot
Match: A0A835Z9K8_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9K8_9STRA)

HSP 1 Score: 201 bits (512), Expect = 3.710e-64
Identity = 94/143 (65.73%), Postives = 119/143 (83.22%), Query Frame = 0

Query:    4 ELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQASTMLQEPHADNPLEADIARQLAEDKNAFDQTARKWTHDFAS 146
            ELTELRK  L+WC+  P DD+I+ W+AM+VGP+++P++GG F L+IE   EYPFKAPKVKF TRIYHPN++T+ GEIC+DILN+NWGPTLN+++VLNT+RQ   ML EP A++PLE DIARQLAEDK  F +TA K+T DFAS
Sbjct:    8 ELTELRKAPLDWCQCGPVDDNIMHWSAMMVGPDNSPYAGGVFQLDIEMSPEYPFKAPKVKFLTRIYHPNIRTEGGEICADILNDNWGPTLNLSHVLNTLRQ---MLLEPSAESPLEPDIARQLAEDKAQFLKTAAKYTADFAS 147

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BLAST of mRNA_P-canaliculata_contig9357.23365.1 vs. uniprot
Match: A0A024U3D9_9STRA (UBC core domain-containing protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024U3D9_9STRA)

HSP 1 Score: 199 bits (506), Expect = 3.040e-63
Identity = 88/143 (61.54%), Postives = 115/143 (80.42%), Query Frame = 0

Query:    4 ELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQASTMLQEPHADNPLEADIARQLAEDKNAFDQTARKWTHDFAS 146
            EL E  KN  EWC + P DDD+L WNAM+VGPE+TP++GG F++++ FPAEYPFKAPKVKF TR+YHPNVK+ +GEIC+DI+NE+WGPTLNV + L  ++Q   ML++P ADNPLE +IA+ L  +++ F+ TARKWT DFAS
Sbjct:    8 ELAEFNKNSPEWCTVGPVDDDLLHWNAMVVGPENTPYAGGVFSIDLVFPAEYPFKAPKVKFLTRVYHPNVKSQSGEICADIINESWGPTLNVLHCLTALKQ---MLEQPDADNPLEPEIAKLLHGNRDVFNDTARKWTKDFAS 147

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BLAST of mRNA_P-canaliculata_contig9357.23365.1 vs. uniprot
Match: G4YF85_PHYSP (UBC core domain-containing protein n=17 Tax=Peronosporaceae TaxID=4777 RepID=G4YF85_PHYSP)

HSP 1 Score: 196 bits (499), Expect = 3.540e-62
Identity = 85/143 (59.44%), Postives = 114/143 (79.72%), Query Frame = 0

Query:    4 ELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQASTMLQEPHADNPLEADIARQLAEDKNAFDQTARKWTHDFAS 146
            EL E  KN  EWC +   DDD++ WNAML GPED+P+SGG FNL+++FP+EYPFKAPKV+F TR+YHPNVK+ +GEIC+DI+NENWGPTLNV + L  I+Q   +L++P  DNPLE +IA+Q+ E+K  F++TA++WT  +AS
Sbjct:    8 ELAEFEKNSPEWCTVSAVDDDLMHWNAMLAGPEDSPYSGGVFNLDLQFPSEYPFKAPKVRFLTRVYHPNVKSQSGEICADIINENWGPTLNVLHCLTAIKQ---ILEQPDMDNPLEPEIAKQMHENKADFEKTAQEWTKQYAS 147

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BLAST of mRNA_P-canaliculata_contig9357.23365.1 vs. uniprot
Match: A0A067CHA9_SAPPC (UBC core domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CHA9_SAPPC)

HSP 1 Score: 194 bits (493), Expect = 2.900e-61
Identity = 83/143 (58.04%), Postives = 116/143 (81.12%), Query Frame = 0

Query:    4 ELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQASTMLQEPHADNPLEADIARQLAEDKNAFDQTARKWTHDFAS 146
            EL E  KN  +WC +   DDD+L WNAM+VGP+++P++GG F++++ FPAEYPFKAPKVKF TR+YHPNVK+ +GEIC+D++NENWGPTLNV + L  ++Q   +L++P  DNPLE +IA+QL  +++AF++TA+KWT DFAS
Sbjct:    8 ELAEFNKNSPDWCTVGTVDDDLLHWNAMVVGPDNSPYAGGVFSIDLLFPAEYPFKAPKVKFLTRVYHPNVKSQSGEICADVINENWGPTLNVMFCLTALKQ---ILEQPDGDNPLEPEIAKQLQCNRDAFNETAKKWTKDFAS 147

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BLAST of mRNA_P-canaliculata_contig9357.23365.1 vs. uniprot
Match: A0A835YRR6_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRR6_9STRA)

HSP 1 Score: 193 bits (490), Expect = 8.300e-61
Identity = 90/143 (62.94%), Postives = 112/143 (78.32%), Query Frame = 0

Query:    4 ELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQASTMLQEPHADNPLEADIARQLAEDKNAFDQTARKWTHDFAS 146
            EL EL+++ L+WC  +P +DDIL+W A +VGP+ TP+ GG FN+ +EFPAEYPFKAPKVKF TRIYHP+V+T TGEIC+D+L  NWGPTLNVT+VLNTIRQ   ML EP  ++PLE +I R L EDK AF + A K T +FAS
Sbjct:    8 ELAELKRSPLDWCTCEPQEDDILQWTATIVGPDGTPYEGGIFNISLEFPAEYPFKAPKVKFQTRIYHPHVRTATGEICADVLLNNWGPTLNVTFVLNTIRQ---MLIEPSTESPLEPEIGRLLIEDKQAFIKNAAKCTAEFAS 147

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BLAST of mRNA_P-canaliculata_contig9357.23365.1 vs. uniprot
Match: A0A2D4CAW9_PYTIN (UBC core domain-containing protein n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CAW9_PYTIN)

HSP 1 Score: 192 bits (489), Expect = 1.180e-60
Identity = 82/143 (57.34%), Postives = 111/143 (77.62%), Query Frame = 0

Query:    4 ELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQASTMLQEPHADNPLEADIARQLAEDKNAFDQTARKWTHDFAS 146
            EL E  KN  +WC +   DDD++ WNAM+ GPED+P+SGG F+L+++FP EYPFKAPK++F T++YHPN+KT +GEIC+DI+NENW PTLNV + L  I+Q   +L++P  DNPLE +IARQL  DK AF QTA++WT  +A+
Sbjct:    8 ELAEFEKNSPDWCTVGSVDDDLMHWNAMVAGPEDSPYSGGVFSLDLQFPNEYPFKAPKIRFLTKVYHPNIKTSSGEICADIINENWAPTLNVLHCLQAIKQ---ILEQPDVDNPLEPEIARQLQSDKEAFHQTAQEWTKQYAT 147

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BLAST of mRNA_P-canaliculata_contig9357.23365.1 vs. uniprot
Match: K3W7Y2_GLOUD (UBC core domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W7Y2_GLOUD)

HSP 1 Score: 190 bits (482), Expect = 1.370e-59
Identity = 81/143 (56.64%), Postives = 111/143 (77.62%), Query Frame = 0

Query:    4 ELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQASTMLQEPHADNPLEADIARQLAEDKNAFDQTARKWTHDFAS 146
            EL E  KN  EWC +   DDD++ WNAML GPE++P+SGG F+++++FP EYPFKAP+V+F TR+YHPNVK+ +GEIC+DI+NENWGPTLNV + L  I+Q   +L++P  DNPLE +IA+QL  ++  FD TA++WT  +AS
Sbjct:    8 ELAEFEKNSPEWCTVGAVDDDLMHWNAMLAGPENSPYSGGVFSIDLQFPNEYPFKAPRVRFLTRVYHPNVKSQSGEICADIINENWGPTLNVLHCLTAIKQ---ILEQPDVDNPLEPEIAKQLQSNREEFDNTAKEWTKQYAS 147

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BLAST of mRNA_P-canaliculata_contig9357.23365.1 vs. uniprot
Match: A0A397DVW9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DVW9_9STRA)

HSP 1 Score: 201 bits (512), Expect = 5.480e-59
Identity = 89/143 (62.24%), Postives = 115/143 (80.42%), Query Frame = 0

Query:    4 ELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQASTMLQEPHADNPLEADIARQLAEDKNAFDQTARKWTHDFAS 146
            EL E  KN  EWC + P DDD+L WNAM+VGPE+TP++GG F++++ FPAEYPFKAPKVKF TR+YHPNVK+ +GEIC+DI+NE+WGPTLNV + L  ++Q   ML++P ADNPLE +IA+QL   ++ F+ TARKWT DFAS
Sbjct:    8 ELAEFNKNSPEWCTVGPVDDDLLHWNAMVVGPENTPYAGGVFSIDLVFPAEYPFKAPKVKFLTRVYHPNVKSQSGEICADIINESWGPTLNVLHCLTALKQ---MLEQPDADNPLEPEIAKQLHGSRDVFNDTARKWTKDFAS 147

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig9357.23365.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig9357.23365.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G8X7_ECTSI	8.260e-91	88.19	UBC core domain-containing protein n=2 Tax=Ectocar...	[more]
A0A6V1MVK4_HETAK	6.440e-65	65.73	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A835Z9K8_9STRA	3.710e-64	65.73	Ubiquitin-conjugating enzyme/RWD-like protein n=1 ...	[more]
A0A024U3D9_9STRA	3.040e-63	61.54	UBC core domain-containing protein n=4 Tax=Aphanom...	[more]
G4YF85_PHYSP	3.540e-62	59.44	UBC core domain-containing protein n=17 Tax=Perono...	[more]
A0A067CHA9_SAPPC	2.900e-61	58.04	UBC core domain-containing protein n=4 Tax=Saprole...	[more]
A0A835YRR6_9STRA	8.300e-61	62.94	Ubiquitin-conjugating enzyme/RWD-like protein n=1 ...	[more]
A0A2D4CAW9_PYTIN	1.180e-60	57.34	UBC core domain-containing protein n=2 Tax=Pythium...	[more]
K3W7Y2_GLOUD	1.370e-59	56.64	UBC core domain-containing protein n=1 Tax=Globisp...	[more]
A0A397DVW9_9STRA	5.480e-59	62.24	Uncharacterized protein n=1 Tax=Aphanomyces astaci...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 1..146 e-value: 1.4E-45 score: 167.5
None	No IPR available	PANTHER	PTHR24068	FAMILY NOT NAMED	coord: 3..145
None	No IPR available	PANTHER	PTHR24068:SF121	UBIQUITIN CONJUGATING ENZYME E2 B	coord: 3..145
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10		coord: 1..147 e-value: 2.6E-50 score: 172.2
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 3..145
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 3..140 e-value: 5.1E-42 score: 142.8
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBIQUITIN_CONJUGAT_2	coord: 1..135 score: 35.429

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-canaliculata_contig9357	contig	P-canaliculata_contig9357:8740..11760 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pelvetia canaliculata dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-canaliculata_contig9357.23365.1	mRNA_P-canaliculata_contig9357.23365.1	Pelvetia canaliculata dioecious	mRNA	P-canaliculata_contig9357 8740..11760 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-canaliculata_contig9357.23365.1 ID=prot_P-canaliculata_contig9357.23365.1|Name=mRNA_P-canaliculata_contig9357.23365.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=148bp
RLQELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIE
FPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLN
TIRQASTMLQEPHADNPLEADIARQLAEDKNAFDQTARKWTHDFASP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016135	UBQ-conjugating_enzyme/RWD
IPR000608	UBQ-conjugat_E2