prot_P-canaliculata_contig919.23169.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig919.23169.1
Unique Nameprot_P-canaliculata_contig919.23169.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length1120
Homology
BLAST of mRNA_P-canaliculata_contig919.23169.1 vs. uniprot
Match: A0A6H5K0I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0I6_9PHAE)

HSP 1 Score: 448 bits (1152), Expect = 6.640e-133
Identity = 410/1070 (38.32%), Postives = 505/1070 (47.20%), Query Frame = 0
Query:   74 AERAASQWLRERTRASLRAATERWQEAALR--SRLASAKLPTTHSQVTVASPGSFSAWVMYSRRRARARGLVSRLLNRTITIALAEGFRRLSAEAEKALCLERAKALTARGTGNARRAAAVALLGALRRSRRQSLRWGFGMLEEGRLDKERKLQALKRLSCSHRRRELDLLSIALTRWRRRIASRALTITGARRLAGMARRLELRGAIRRWGRAVDVERAVEGLAVRVERVVKHVYLTRGWQRWRAECRRRQDVEAREREEKRXXXXXXXXXXXXXXXXXXRCLTEWRVQTVIRRCQLRSARSLLLSQDRRRLRGAFSAWREGRRGRAVTTRALFRAARSIETATLRAGFRRLAVSARRKGQEEVVTIVAAARLETDQALRDRDAMSARLVEVEEKARCAVKERAFADYRAEAERALARRSVTISDCFSAWKALAQSQRRRTACAQRLLNRLRRGSLRRALACWRDGARESASLALVERLVARNDKRDTQRRHLRAWFDCTRRHRLAKGMLLRTTRVSSSLEKWRIRRAFGAWRTAADIRSRWAVNISGACARLRAVRVLAGRSQLVSAFSLWARLSKTAAQAENVAETAAAARRRRILRACFVALSRNAVTHRLGHRAVVSLDRTLRLRRLARGWGAMFGAAAAAVAVSETRARLGVAEARVAEGREAARARAHRTARRLLGVVRGRTALEAFVSWKAYVRQGRGARLGGRALAARSRRRVLRDALVXXXEQSLASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADRVKKAAAAALSGVYERRRSDRAGKILALRTWRQNACFEEFDS----SGNGVKVVGGVGGVEASEEWDSGALEVLAEVAQEATAAFSFASSVARVFSLVEQFIAMVVPLSRGHLLLLPGKPGGEMFSLKYDRMVKPEQDAVEVSFPIGDGLVRRCVSTGLPCQAVGGDGGXXXXXGSRFSSRRAPKNNAG--VALSGPADLYGLLSPGSYHHHCPEVTSSAAGTLTFSTDTSTSTGSRLA---PGPDSASTMHRTPGS-------------VAAVSADARGRPLRLAFFPA--DYDDSRSP 1117
            +ER AS ++RER RASLRAA  +W+   LR  S L +A +     ++  A   +   W     R+A A           +  A AEG R L+A                          A  L  AL R RR+SL  G G L +G                     E  L+         + +SR  T T  RRLA + RR +L GA+RRWG  V  E+A+ GL  RVER        R  + W                                      CL  W+   V RR QLRSARS LL+Q+RR +RGA  AWREGRR RA   R L+   R+  TA LR G RRL VSAR K + E  TIV++A+LET++  R+RD M +RL E  ++   A ++RA                                                           RD  R++A L +VER+V RN +R   +  LRAW +  RR R       R  R   SLEK +   AF AWR AA   +R A +ISGACARLRAVR   GR QL S+FS+WARLS  ++ ++  AE AA A+R+R +R CF  L  NA   +   RA+ SLDR   L +LARGWGAM  AAA A A   +  RL  AEA VA GR A RARAHRTARRLLGV RGR ALEAFV+W+  VR+GRGARLG  ALAAR R             ++ ASS                             R    K  A  AL+   +RRRSDRA   LALRTW +NAC  + D     SG+G    GG+             LE +A V  EA AAFS ASS+  VF+LVE F++ V   SRG LLLL G+PGG MF L+ DR   P+QD +E SFPIG+GLV RCV+TGL  Q   G  G         SSRR    +    VAL+GPADL+ L     Y    P   ++  G        S     + A   P PDSAST+   P S             V  V    RG P RLAFFPA  D + SRSP
Sbjct:   38 SERTASAFVRERQRASLRAAIWQWRAITLRASSELGTAMMLADRLKLRQAKRRTLRHWA----RQAAAXXXXXXXXX--LARAEAEGVR-LNA--------------------------AAVLTEALSRGRRRSLERGVGKLRDG--------------------VEASLM---------KASSRETTATALRRLARLRRRRQLSGAMRRWGGVVSAEQALGGLGGRVERXXXXXXXXRAVRVW--------------------------------------CLMAWKAYGVSRRIQLRSARSFLLAQNRRAVRGALVAWREGRRRRAEAARKLWHLGRACRTAALREGLRRLKVSAREKERREAATIVSSAKLETEEMRRERDGMGSRLTEATDEIHRAARQRAXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDETRDAAYLEMVERVVTRNARRKLLQTTLRAWSEGARRRRRFAATFWRAARAVRSLEKRQQHVAFLAWRVAAVNETRRAADISGACARLRAVRKRPGRLQLASSFSIWARLSAASSHSDRHAEIAACAKRQRAVRTCFSTLRSNASLRQRTRRALSSLDRRCSLSQLARGWGAMLRAAATASAERRSGLRLSRAEAAVAAGRLATRARAHRTARRLLGVARGRAALEAFVAWRGLVREGRGARLGAAALAARWR------------GEARASSRLRSRALSRISQAAQGLVSEAFSTWREGSRIAHGKAKALTALARASDRRRSDRAEMRLALRTWTRNACGGDGDGGGRRSGDGEPRGGGM----------EDGLEAVAGVFVEAAAAFSTASSIPEVFTLVEDFVSEVAISSRGRLLLLNGEPGGGMFCLESDRRAPPDQDPLEASFPIGNGLVARCVATGLAFQTRRGGNGSTGGASPPRSSRRLYSTSGALDVALAGPADLHALPLQERYDPESPSHRAAENGAHAQPLSMSFQGWKKKAVTGPIPDSASTLLPPPASWNHRRSRSPDGSPVLGVGGSGRG-PSRLAFFPASDDCESSRSP 980          
BLAST of mRNA_P-canaliculata_contig919.23169.1 vs. uniprot
Match: D7FQ01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ01_ECTSI)

HSP 1 Score: 341 bits (875), Expect = 5.650e-98
Identity = 268/526 (50.95%), Postives = 314/526 (59.70%), Query Frame = 0
Query:  515 CAQRLLNRLRRGSLRRALACWRDGARESASLALVERLVARNDKRDTQRRHLRAWFDCTRRHRLAKGMLLRTTRVSSSLEKWRIRRAFGAWRTAADIRSRWAVNISGACARLRAVRVLAGRSQLVSAFSLWARLSKTAAQAENVAETAAAARRRRILRACFVALSRNAVTHRLGHRAVVSLDRTLRLRRLARGWGAMFGAAAAAVAVSETRARLGVAEARVAEGREAARARAHRTARRLLGVVRGRTALEAFVSWKAYVRQGRGARLGGRALAARSRRRVLRDALVXXXEQSLASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADRVKKAAAAALSGVYERRRSDRAGKILALRTWRQNACFEEFDSSGNGVKVVGGVGGVEASEEWDSGALEVLAEVAQEATAAFSFASSVARVFSLVEQFIAMVVPLSRGHLLLLPGKPGGEMFSLKYDRMVKPEQDAVEVSFPIGDGLVRRCVSTGLPCQAVGGDGGXXXXXGSRFSSRRAPKNNAG--VALSGPADLYGL 1038
            C  +L+ R   G L  AL  WRD  R++A+L +VER+V RN +R   +  LRAW +  RR R       R  R   SLEK +   AF AWR AA   +R A +ISGACARLRAVR   GR QL SAFS+WARLS  ++ ++  AE AA  +R+R +R CF  L  NA   R   RA+ SLDR   LR+LARGWGAM  AAA A A   +  RL  AEA VA GR A R RAHRTARRLLGV RGR ALEAFV+W+  VR+GRGARLG  AL              XXX       XXXXXXXXXXXXXXXXXXXXXXXXX    R    K  A  AL+   +RR+SDRA   LALRTWR+NAC  + D  G         GG  A        LE +A    EA AAFS ASS+  VF+LVE F++ V   SRG LLLL G+PGG MF L+ DR   P+QD +E SFPIG+GLV RCV+TGL  Q   G  G         SSRR    +    VAL+GPADL+ L
Sbjct:    8 CLVKLVRRRHDGFLHEALCSWRDETRDAATLEMVERVVTRNARRKLLQTTLRAWSEGARRRRRFAATFWRAARAVRSLEKRQQHGAFLAWRVAAVNETRRAADISGACARLRAVRKRPGRLQLASAFSIWARLSAASSHSDRHAEIAACTKRQRAVRTCFSTLRSNASLRRRARRALFSLDRRCSLRQLARGWGAMLRAAATASAERRSGLRLSRAEAAVAAGRLATRTRAHRTARRLLGVARGRAALEAFVAWRGLVREGRGARLGAAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGSRQAHGKAKALTALARASDRRQSDRAEMRLALRTWRRNACGGDGDGGGGRXXXXEPRGGGMAD------GLEAMAGAFVEAAAAFSTASSIPEVFTLVEDFVSEVAVSSRGRLLLLNGEPGGGMFCLESDRRAPPDQDPLEASFPIGNGLVARCVATGLAFQTRRGGNGSTGGASPPRSSRRLYSTSGALDVALAGPADLHAL 527          
BLAST of mRNA_P-canaliculata_contig919.23169.1 vs. uniprot
Match: D7FQ02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ02_ECTSI)

HSP 1 Score: 258 bits (658), Expect = 1.100e-67
Identity = 195/477 (40.88%), Postives = 263/477 (55.14%), Query Frame = 0
Query:   35 ETDRDCTAQRVECRGRVTSLEHYTVPPHCQEYESFRREVAERAASQWLRERTRASLRAATERWQEAALRSRLASAKLPTTHSQVTVASPGSFSAWVMYSRRRARARGLVSRLLNRTITIALAEGFRRLSAEAEKALCLERAKALTARGTGNARRAAAVALLGALRRSRRQSLRWGFGMLEEGRLDKERKLQALKRLSCSHRRRELDLLSIALTRWRRRIASRALTITGARRLAGMARRLELRGAIRRWGRAVDVERAVEGLAVRVERVVKHVYLTRGWQRWRAECRRRQDVEAREREEKRXXXXXXXXXXXXXXXXXXRCLTEWRVQTVIRRCQLRSARSLLLSQDRRRLRGAFSAWREGRRGRAVTTRALFRAARSIETATLRAGFRRLAVSARRKGQEEVVTIVAAARLETDQALRDRDAMSARLVEVEEKARCAVKERAFADYRAEAERALARRSVTISDCFSAWKALAQSQRR 511
            E DRD  AQ  E R      E++      + Y+S     +ER AS ++RER RASLRAA  +W+   LRS L +A +     ++  A  G+F AW+   RRR+ AR L+SRLL+R   +      R  + +A  A       AL       AR  AA  L  A  R RR+SL  G G L +G      K +AL+RLS + R R+L +LS AL RWR + + R  T T  R LA + RR EL GA+RRWG  V  E+A+EGL  RVERVV         + WR EC R+Q +  R+  E+                   RCL  W+   V RR QLRSARS LL+++RR +RGA  AWR+GRR RA   R L+   R+  TA LR G RRL VSAR K ++E   IV++A+LET++  R+RD M +RL+E  E+   A ++RA    + E E A  +R     +CF+AWKA+AQ+++R
Sbjct:  549 EGDRDRVAQ--ELRDLQGVFENFQATSAERAYDS-----SERTASAFIRERQRASLRAAIWQWRAITLRSDLGTAMMLADRLKLRQAKRGAFGAWLDLCRRRSHARALMSRLLHRKTAVDQRRTLRHWARQAAAAXXXXXXXALARAEAEGARLNAAAVLTEAFSRGRRRSLERGVGKLRDGVEASLMKSRALRRLSIACRHRDLGMLSAALWRWRSQASWREATATALRHLARLRRRRELSGAMRRWGGVVAAEQALEGLGGRVERVVXXXXXXXXXRVWREECTRQQTLATRKAGERCRRVLSGRLASAARRNLLMRCLMAWKAYAVSRRIQLRSARSFLLARNRRAVRGALVAWRDGRRWRAQAARKLWHLGRACRTAALREGLRRLGVSAREKERQEAAMIVSSAKLETEEMRRERDGMGSRLIEATEEIHRAARQRA----KVEKELARRQRLAFGRECFAAWKAVAQAEQR 1014          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig919.23169.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K0I6_9PHAE6.640e-13338.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQ01_ECTSI5.650e-9850.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FQ02_ECTSI1.100e-6740.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 24..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig919contigP-canaliculata_contig919:2179..28963 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig919.23169.1mRNA_P-canaliculata_contig919.23169.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig919 2179..28963 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig919.23169.1 ID=prot_P-canaliculata_contig919.23169.1|Name=mRNA_P-canaliculata_contig919.23169.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=1120bp
DKAEALERSLSELRDNSENRGALLEEAAEKTQELETDRDCTAQRVECRGR
VTSLEHYTVPPHCQEYESFRREVAERAASQWLRERTRASLRAATERWQEA
ALRSRLASAKLPTTHSQVTVASPGSFSAWVMYSRRRARARGLVSRLLNRT
ITIALAEGFRRLSAEAEKALCLERAKALTARGTGNARRAAAVALLGALRR
SRRQSLRWGFGMLEEGRLDKERKLQALKRLSCSHRRRELDLLSIALTRWR
RRIASRALTITGARRLAGMARRLELRGAIRRWGRAVDVERAVEGLAVRVE
RVVKHVYLTRGWQRWRAECRRRQDVEAREREEKRRSALSGRLQEGSRRAL
LLRCLTEWRVQTVIRRCQLRSARSLLLSQDRRRLRGAFSAWREGRRGRAV
TTRALFRAARSIETATLRAGFRRLAVSARRKGQEEVVTIVAAARLETDQA
LRDRDAMSARLVEVEEKARCAVKERAFADYRAEAERALARRSVTISDCFS
AWKALAQSQRRRTACAQRLLNRLRRGSLRRALACWRDGARESASLALVER
LVARNDKRDTQRRHLRAWFDCTRRHRLAKGMLLRTTRVSSSLEKWRIRRA
FGAWRTAADIRSRWAVNISGACARLRAVRVLAGRSQLVSAFSLWARLSKT
AAQAENVAETAAAARRRRILRACFVALSRNAVTHRLGHRAVVSLDRTLRL
RRLARGWGAMFGAAAAAVAVSETRARLGVAEARVAEGREAARARAHRTAR
RLLGVVRGRTALEAFVSWKAYVRQGRGARLGGRALAARSRRRVLRDALVR
WREQSLASSRLRARTLARLSAVAERLVTQGFQRWRERSRADRVKKAAAAA
LSGVYERRRSDRAGKILALRTWRQNACFEEFDSSGNGVKVVGGVGGVEAS
EEWDSGALEVLAEVAQEATAAFSFASSVARVFSLVEQFIAMVVPLSRGHL
LLLPGKPGGEMFSLKYDRMVKPEQDAVEVSFPIGDGLVRRCVSTGLPCQA
VGGDGGGGDGDGSRFSSRRAPKNNAGVALSGPADLYGLLSPGSYHHHCPE
VTSSAAGTLTFSTDTSTSTGSRLAPGPDSASTMHRTPGSVAAVSADARGR
PLRLAFFPADYDDSRSPSPA
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