prot_P-canaliculata_contig91597.23121.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig91597.23121.1
Unique Nameprot_P-canaliculata_contig91597.23121.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length165
Homology
BLAST of mRNA_P-canaliculata_contig91597.23121.1 vs. uniprot
Match: A0A5C6DFK5_9BACT (PEP-CTERM domain-containing protein n=1 Tax=Novipirellula aureliae TaxID=2527966 RepID=A0A5C6DFK5_9BACT)

HSP 1 Score: 116 bits (291), Expect = 2.860e-29
Identity = 75/158 (47.47%), Postives = 99/158 (62.66%), Query Frame = 0
Query:   11 TIAATTSITGGDSLGVNNPTIGNGDFETFKGSVVGTEGTDFNFGEGWVISFDTSVIIEEFNFSSIDE-DGSFDVTVDGVTT--PFPDGNASDDFSFPLGDGSGSIIPANTLITFTVNDVNQDASVRIT--SITVNAVPEPSSFALLGVLGLGAVARRR 163
            T+ ATT+I G +++G+NNPT  N  ++T  G      G DFN GE WVI FD +V+I EFNFSSID  D  FDVTV+G  T   F DG + DDF+ PL   SG ++ A T +TF         ++RI+  S+TV A+PEPSS A+LG+ G+    RRR
Sbjct:   86 TVTATTNI-GSNAIGINNPTYSNNAYDTLTGQTADESG-DFNPGEAWVIEFDKNVMITEFNFSSIDGVDEFFDVTVEGNPTVFSFTDGTSGDDFADPL---SGLVVAAGTDVTFAARGTIGGTNIRISEISVTVVAIPEPSSLAVLGLGGMMMFVRRR 238          
BLAST of mRNA_P-canaliculata_contig91597.23121.1 vs. uniprot
Match: UPI00199B3FA9 (Uncharacterized protein n=2 Tax=Roseibacillus persicicus TaxID=454148 RepID=UPI00199B3FA9)

HSP 1 Score: 67.4 bits (163), Expect = 1.450e-10
Identity = 48/152 (31.58%), Postives = 78/152 (51.32%), Query Frame = 0
Query:   15 TTSITGGDSLGVNNPTIGNGDFETFKGSVVGTEGTDFNFGEGWVISFDTSVIIEEFNFSSID--EDGSFDVTVDGVTTPFPDGNASDDFSFPLGDGSGSIIPANTLITFTVNDVNQDASVRITSITVNAVPEPSSFALLGVLGLGAVARRRR 164
            TT++  G++LGVN+               V  E ++FN GE W+ISF++S+   + +FS  +  + G   ++  G+T     GN  DD        +   I ANT +T  + ++  +  +RI++ TV A+PEPSS  LL +LG  A    R+
Sbjct:   89 TTNVNNGNTLGVNSQ----------DDPGVSGENSNFNPGEAWIISFNSSIQFNDIDFSGWNGSDGGEITISAAGITDIVIGGNDIDDSDDTYSFTAPETIAANTPVTIAMTNITGEDGIRISNFTVTAIPEPSSL-LLVLLGSSAFGLCRK 229          
BLAST of mRNA_P-canaliculata_contig91597.23121.1 vs. uniprot
Match: A0A517N1N7_9BACT (Uncharacterized protein n=1 Tax=Adhaeretor mobilis TaxID=1930276 RepID=A0A517N1N7_9BACT)

HSP 1 Score: 58.2 bits (139), Expect = 3.580e-7
Identity = 50/150 (33.33%), Postives = 69/150 (46.00%), Query Frame = 0
Query:   22 DSLGVNNPTIGNGDFETFKGSVVGTEGTDFNFGEGWVISFDTSVIIEEFNFSSIDEDGSFDVTVDGVTTPFPD---GNASDDFSFPLGDGSGSIIPANTLITFTV----NDVNQDASVRITSITVNAVPEPSSFALLGVLGLGAVARRRR 164
            +SLG+N+ T   G            E  DFN GE WVISFD  V + E + +  D+     ++    +T F D   GN        LG+     + A T IT  +    N ++ D  +R+ S+TV  +PEPSSF L G   L A  R  R
Sbjct:   94 NSLGINDDTNPGG---------YSNESRDFNPGEAWVISFDVDVNLVEIDLAGQDDGALLTIS----STAFSDVVLGNGESGDVHNLGE---LFVTAGTTITLQMSADSNVMDPDTGLRVDSLTVGTIPEPSSFLLAGCAVLFAFGRGNR 227          
BLAST of mRNA_P-canaliculata_contig91597.23121.1 vs. uniprot
Match: A0A5C5YPQ3_9BACT (PEP-CTERM motif protein n=1 Tax=Planctomycetes bacterium CA13 TaxID=2527986 RepID=A0A5C5YPQ3_9BACT)

HSP 1 Score: 57.4 bits (137), Expect = 9.030e-7
Identity = 54/159 (33.96%), Postives = 78/159 (49.06%), Query Frame = 0
Query:   17 SITGGDSLGVNNPTIGNGDFETFKGSVVGTEGTDFNFGEG--WVISFDTSVIIEEFNFSSIDEDGSFDVTVDGVTTPFPDGNASDDFSFPLGDGSGSIIPANTLITFTVNDVNQDASVRITS---------ITVNAVPEPSSFALLGVLGLGAVARRRR 164
            ++  GD+  ++   IG G F +   SV    GTD+NFG    + I    + + +  + ++    G  DV VDG  T F         SFP G G+G+    +T+I       N DA+   T+         ++V AVPEPS+FALLG+  LG VA RRR
Sbjct:  124 AVASGDTGNLDYTDIGTGTFSSGGTSV----GTDWNFGTAAHFDIVATLTAVGDGADGTTTSAAGVIDVFVDGTQTVFAQA-----MSFPGGGGAGA---GSTVIDGFALWANADATAATTTNRVLIDNVVVSVTAVPEPSTFALLGLGSLGLVASRRR 270          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig91597.23121.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A5C6DFK5_9BACT2.860e-2947.47PEP-CTERM domain-containing protein n=1 Tax=Novipi... [more]
UPI00199B3FA91.450e-1031.58Uncharacterized protein n=2 Tax=Roseibacillus pers... [more]
A0A517N1N7_9BACT3.580e-733.33Uncharacterized protein n=1 Tax=Adhaeretor mobilis... [more]
A0A5C5YPQ3_9BACT9.030e-733.96PEP-CTERM motif protein n=1 Tax=Planctomycetes bac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013424PEP-CTERM protein-sorting domainTIGRFAMTIGR02595TIGR02595coord: 142..164
e-value: 1.0E-5
score: 24.0
IPR013424PEP-CTERM protein-sorting domainPFAMPF07589PEP-CTERMcoord: 141..164
e-value: 1.8E-5
score: 24.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig91597contigP-canaliculata_contig91597:580..1074 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig91597.23121.1mRNA_P-canaliculata_contig91597.23121.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig91597 580..1074 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig91597.23121.1 ID=prot_P-canaliculata_contig91597.23121.1|Name=mRNA_P-canaliculata_contig91597.23121.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=165bp
NPGTNILTGNTIAATTSITGGDSLGVNNPTIGNGDFETFKGSVVGTEGTD
FNFGEGWVISFDTSVIIEEFNFSSIDEDGSFDVTVDGVTTPFPDGNASDD
FSFPLGDGSGSIIPANTLITFTVNDVNQDASVRITSITVNAVPEPSSFAL
LGVLGLGAVARRRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013424PEP_exosort_dom