mRNA_P-canaliculata_contig101384.230.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig101384.230.1
Unique NamemRNA_P-canaliculata_contig101384.230.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig101384.230.1 vs. uniprot
Match: UPI0016756C6A (thioredoxin family protein n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI0016756C6A)

HSP 1 Score: 467 bits (1201), Expect = 6.130e-158
Identity = 243/340 (71.47%), Postives = 277/340 (81.47%), Query Frame = 1
Query:    1 RRAGWAYTAGVLVSFALFALVLIALKAGGASVGWGFQLQSPWLVALLALLLFAIGLNLLGVYEIGGRLQNVGQDAVGKSGPFSSFLTGVLAVIVATPCTAPFMAGAVGYALSSSAFITLAVFLALGLGFALPFLLVAYMPGLLSRLPKPGAWMETFKQFWAFPMFAAAIWLVWVLSLHAGEGGVLKLLLGGLALAFGIWLLRHKGIVAKLIGILALILAVYLPATVRSPDSV---AELTSQTWSIERVASLQAEGRPIFVDFTAAWCVTCKVNEALVFNTRKTQALFDRTGTTFLVADWTNKDNVIANELKRFGRAGVPLYLVYTPGSAEPEILPQVLTH 1011
            R AGWAYTAGVL+SFA+FAL+LI LKA GA+VGWGFQ+QSPWLV +LALLLFAIGLNLLGV+EIGGR QNVG D     GP SSFLTGVLAVIVATPCT  FMAGAVGYAL S A  + AVFLALGLGFALPFL++AY PGLL RLPKPG WMETF+QF AFPMFAAAIWLVWV+S+     GV KLLL GL L+F IWL R  G ++K++G LAL  ++ LP +V++P++V   A L+S++WS E VA  +AEGRP+FVDFTAAWCVTCKVNE  V  T+KT  LFDRT T FL+ADWTNKD+VIA EL RFGRAGVPLYLVY+PG   PEILPQ LTH
Sbjct:  337 RIAGWAYTAGVLISFAVFALLLIGLKAAGATVGWGFQMQSPWLVGVLALLLFAIGLNLLGVFEIGGRFQNVGADIAHDGGPISSFLTGVLAVIVATPCTVAFMAGAVGYALVSPAAASFAVFLALGLGFALPFLILAYAPGLLGRLPKPGPWMETFRQFLAFPMFAAAIWLVWVISIQTDANGVGKLLLSGLTLSFAIWLFRKGGRLSKVLGALALAASIALPLSVKAPEAVNGEAALSSRSWSAEAVAMARAEGRPVFVDFTAAWCVTCKVNEMRVLKTKKTADLFDRTDTQFLIADWTNKDDVIAAELARFGRAGVPLYLVYSPGVEAPEILPQFLTH 676          
BLAST of mRNA_P-canaliculata_contig101384.230.1 vs. uniprot
Match: UPI000429C37C (thioredoxin family protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI000429C37C)

HSP 1 Score: 413 bits (1061), Expect = 8.370e-137
Identity = 215/342 (62.87%), Postives = 256/342 (74.85%), Query Frame = 1
Query:    1 RRAGWAYTAGVLVSFALFALVLIALKAGGASVGWGFQLQSPWLVALLALLLFAIGLNLLGVYEIGGRLQNVGQDAVGKSGPFSSFLTGVLAVIVATPCTAPFMAGAVGYALSSSAFITLAVFLALGLGFALPFLLVAYMPGLLSRLPKPGAWMETFKQFWAFPMFAAAIWLVWVLSLHAGEGGVLKLLLGGLALAFGIWLLRHKGIVAKLIGILALILAVYLPATVRSPDSVAELTS-----QTWSIERVASLQAEGRPIFVDFTAAWCVTCKVNEALVFNTRKTQALFDRTGTTFLVADWTNKDNVIANELKRFGRAGVPLYLVYTPGSAEPEILPQVLTH 1011
            +R  W YTAGV+ +F L  L ++ LKAGGA +GWGFQLQSP +VA LA+LLF IGLNLLG +E G  LQN G +   KSG   SF TG LAVIVATPCTAP MAGAVGYAL++ AF+TL VFLAL +GFALPFLL+AY+PGLLS+LPKPG WM  FK+  AFPMFAAAIWLVWVLSL AGE GVL  L   LA+   +W  + K +++K+IG  A++ A+  P TV +  + +E+ S     ++WS  RVA LQAEGR IFVDFTAAWCVTCKVNE LV N  +TQ LF  T T FL+ADWTNKD+VIA EL ++GRAGVPLYLVY+  S  P ILPQVLT+
Sbjct:  336 KREAWLYTAGVIATFMLLTLFILGLKAGGAEIGWGFQLQSPKVVAALAVLLFVIGLNLLGAFEFGSSLQNTGAELTQKSGAAGSFFTGALAVIVATPCTAPLMAGAVGYALAAPAFVTLVVFLALAIGFALPFLLIAYVPGLLSKLPKPGPWMVRFKEVLAFPMFAAAIWLVWVLSLQAGEDGVLIALSAMLAVGLAVWCFKSKTLISKVIGAAAVLAAIVFPLTVTTSGASSEIISTKVNAESWSPSRVAELQAEGRSIFVDFTAAWCVTCKVNEKLVLNQAETQKLFTETNTAFLIADWTNKDDVIAAELAKYGRAGVPLYLVYSNNSVSPAILPQVLTY 677          
BLAST of mRNA_P-canaliculata_contig101384.230.1 vs. uniprot
Match: A0A420WLH6_9PROT (Thiol:disulfide interchange protein DsbD n=1 Tax=Litorimonas taeanensis TaxID=568099 RepID=A0A420WLH6_9PROT)

HSP 1 Score: 397 bits (1021), Expect = 1.170e-130
Identity = 206/345 (59.71%), Postives = 257/345 (74.49%), Query Frame = 1
Query:    1 RRAGWAYTAGVLVSFALFALVLIALKAGGASVGWGFQLQSPWLVALLALLLFAIGLNLLGVYEIGGRLQNVGQDAVGKSGPFSSFLTGVLAVIVATPCTAPFMAGAVGYALSSSAFITLAVFLALGLGFALPFLLVAYMPGLLSRLPKPGAWMETFKQFWAFPMFAAAIWLVWVLSLHAGEGGVLKLLLGGLALAFGIWLLRHKGIVAKLIGILALILAVYLPATVRSP-DSVAELTSQTWSIERVASLQAEGRPIFVDFTAAWCVTCKVNEALVFNTRKTQALFDRTGTTFLVADWTNKDNVIANELKRFGRAGVPLYLVYTP-------GSAEPEILPQVLTH 1011
            RR  WAYTAGV+ +F    L+L+ LKA G  +GWGFQLQSP +VALLALLLF IGLNLLG++E G RLQN G     K G   SF TG+LAVIVATPCTAPFMAGAVGYAL+  A +T+AVF+AL +GFALPFL++AY+PGLL  LPKPG WM  FK+F AFPMFAAAIWLVWVL++ AG GG++ +L+  L + F +WL R +  V+K + I+  + A+ L  T+ +  D+   L  Q WS E+V +L+AEGRP+FVDFTAAWCVTCKVNE LV +  KT+ALF  T T FL+ADWTNKD+VIA EL+ +GRAGVPLYL+++P        S   E+LPQVL++
Sbjct:  343 RREAWAYTAGVIATFIALTLLLLGLKAAGNEIGWGFQLQSPPVVALLALLLFVIGLNLLGLFEFGARLQNTGSGIAAKGGLKGSFFTGLLAVIVATPCTAPFMAGAVGYALAQPALVTIAVFMALAIGFALPFLIMAYVPGLLKALPKPGPWMVRFKEFLAFPMFAAAIWLVWVLTMQAGSGGMIAILIAMLLVGFALWLFRVQNYVSKGLAIILCLAAIVLCLTLTTESDTDTVLEKQAWSPEKVEALRAEGRPVFVDFTAAWCVTCKVNEKLVLDKEKTKALFKETNTAFLIADWTNKDDVIAAELESYGRAGVPLYLMFSPHGSSDSNNSVRAEVLPQVLSY 687          
BLAST of mRNA_P-canaliculata_contig101384.230.1 vs. uniprot
Match: A0A2G1YTX5_9PROT (Thiol:disulfide interchange protein n=2 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G1YTX5_9PROT)

HSP 1 Score: 381 bits (979), Expect = 2.690e-124
Identity = 202/343 (58.89%), Postives = 245/343 (71.43%), Query Frame = 1
Query:    1 RRAGWAYTAGVLVSFALFALVLIALKAGGASVGWGFQLQSPWLVALLALLLFAIGLNLLGVYEIGGRLQNVGQDAVGKSGPFSSFLTGVLAVIVATPCTAPFMAGAVGYALSSSAFITLAVFLALGLGFALPFLLVAYMPGLLSRLPKPGAWMETFKQFWAFPMFAAAIWLVWVLSLHAGEGGVLKLLLGGLALAFGIWLLRHKGIVAKLIGILALILAVYLPATVRSPDSVAELTS----QTWSIERVASLQAEGRPIFVDFTAAWCVTCKVNEALVFNTRKTQALFDRTGTTFLVADWTNKDNVIANELKRFGRAGVPLYLVYTPGS--AEPEILPQVLTH 1011
            R  GW YTAGV+ SF + A +++ LKAGGAS+GWGFQLQ+P LV  L+ L F I LNL G++ IGG LQN G D     G   +F TGVLAVIVATPCTAPFMAGA+G+A + SA + + +FLALG GFALPFL ++Y PGLL+RLPKPG WM+TFKQF AFPM AAAIWLVWVLS+  G GGVL+LL   L L F  WL + K +VAK++   +++L  YL   +   +   E  S      WS ER+A L+AEG  +FVDFTAAWCVTCK NE  V +  KTQ LF RT T  LVADWT +D+VI  EL R GR+GVPLYLVY PG+  AEP+ILPQ+LT+
Sbjct:  348 RSHGWLYTAGVMSSFMILAAIILVLKAGGASIGWGFQLQNPVLVGALSALFFIIALNLFGLFNIGGSLQNTGSDLAANRGTKGAFFTGVLAVIVATPCTAPFMAGALGFAFTQSATMLVVIFLALGSGFALPFLALSYAPGLLARLPKPGPWMDTFKQFLAFPMLAAAIWLVWVLSIQTGAGGVLRLLSAMLLLGFSAWLWKFKSLVAKIVLGASILLGAYLIKELSVAEREQEFASLPQSSVWSPERLAELRAEGHIVFVDFTAAWCVTCKANEVGVIHKPKTQDLFTRTDTVILVADWTRRDDVITAELARHGRSGVPLYLVYGPGTDNAEPQILPQILTY 690          
BLAST of mRNA_P-canaliculata_contig101384.230.1 vs. uniprot
Match: A0A7V5NW26_9PROT (Thiol:disulfide interchange protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=A0A7V5NW26_9PROT)

HSP 1 Score: 377 bits (967), Expect = 2.390e-122
Identity = 199/343 (58.02%), Postives = 250/343 (72.89%), Query Frame = 1
Query:    1 RRAGWAYTAGVLVSFALFALVLIALKAGGASVGWGFQLQSPWLVALLALLLFAIGLNLLGVYEIGGRLQNVGQDAVGKSGPFSSFLTGVLAVIVATPCTAPFMAGAVGYALSSSAFITLAVFLALGLGFALPFLLVAYMPGLLSRLPKPGAWMETFKQFWAFPMFAAAIWLVWVLSLHAGEGGVLKLLLGGLALAFGIWLLRHKGIVAKLIGILALILAVYLPATVRSPDSVAELTSQ----TWSIERVASLQAEGRPIFVDFTAAWCVTCKVNEALVFNTRKTQALFDRTGTTFLVADWTNKDNVIANELKRFGRAGVPLYLVYTPG--SAEPEILPQVLTH 1011
            RR GW YT GV+VSF   A ++IALKA GA +GWGFQLQSP+++ LLALL FAI LNL G++E+GG LQN G          S+F TGVLAVIVATPCTAPFMAGA+G+A +    +TL +F ALG G ALPFLL+A+MPGLL RLPKPGAWMETFKQ  AFPM  AAIWLVWVL+   G GGV+++L   LA+ F +W+ R+K  +A+L+  LAL  A++    +R+     ++++      WS E VA  +AEG  +FVDFTAAWCV+C+ N+ LV +  KT+ LF RTGT  L+ADWTN+D +IA EL+RFGR+GVPLYLVY  G  S EP+ILPQVLT+
Sbjct:  353 RRHGWLYTLGVMVSFLGLAGLVIALKAAGAGIGWGFQLQSPFVIGLLALLFFAIALNLFGLFEVGGALQNTGAGLTRDESARSAFFTGVLAVIVATPCTAPFMAGALGFAFTQPLAVTLVIFAALGAGLALPFLLLAHMPGLLKRLPKPGAWMETFKQLLAFPMLGAAIWLVWVLAGQTGAGGVVRILSAMLAVGFAVWIWRYKNNIARLLFALALGFALWSAYELRTAAFAQKISADKQDAAWSHEAVAKARAEGHVVFVDFTAAWCVSCQANDRLVLSRAKTKELFRRTGTKVLIADWTNRDALIAKELERFGRSGVPLYLVYPAGTDSVEPQILPQVLTY 695          
BLAST of mRNA_P-canaliculata_contig101384.230.1 vs. uniprot
Match: A0A2G2IZM1_9PROT (Thiol:disulfide interchange protein n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2IZM1_9PROT)

HSP 1 Score: 372 bits (954), Expect = 1.950e-120
Identity = 200/339 (59.00%), Postives = 243/339 (71.68%), Query Frame = 1
Query:    1 RRAGWAYTAGVLVSFALFALVLIALKAGGASVGWGFQLQSPWLVALLALLLFAIGLNLLGVYEIGGRLQNVGQDAVGKSGPFSSFLTGVLAVIVATPCTAPFMAGAVGYALSSSAFITLAVFLALGLGFALPFLLVAYMPGLLSRLPKPGAWMETFKQFWAFPMFAAAIWLVWVLSLHAGEGGVLKLLLGGLALAFGIWLLRHKGIVAKLIGILALILAVYLPATVR-SPDSVAELTSQTWSIERVASLQAEGRPIFVDFTAAWCVTCKVNEALVFNTRKTQALFDRTGTTFLVADWTNKDNVIANELKRFGRAGVPLYLVYTPGS--AEPEILPQVLT 1008
            RR G  YTAGVLVSF   A +L+ LKA GA++GWGFQLQ+P +V+ LALL F I LNL G +E GGR QN G D     G   +F TGVLAV+VATPCTAPFMAGA+GYAL+  A   L VF ALGLGFALPFL ++YMP LL R+PKPGAWMETFKQ  AFPM  AAIWL+WVLS    E GV+  LL  L +   IW L+HK  VAK +G++  +L +Y   +++ +  + A  T + WS ERVA L+AEG P+FVDFTA WCVTCKVNE LV +T+  +AL  RT T  L+ADWT KD+ IA+EL R GR+GVPLYLVY+ G+  + P+ILPQ LT
Sbjct:  359 RRHGLMYTAGVLVSFLSLATILLVLKASGAAIGWGFQLQNPVMVSALALLFFVIALNLFGFFEFGGRWQNTGGDLARSKGLKGAFFTGVLAVVVATPCTAPFMAGALGYALAQPALSALLVFFALGLGFALPFLALSYMPALLKRMPKPGAWMETFKQALAFPMCVAAIWLLWVLSGVGDENGVVLTLLSALGITLAIWGLQHKSSVAKGLGVVGALLCIYFLFSLKPATANPAAQTQEAWSPERVAQLRAEGHPVFVDFTARWCVTCKVNERLVLHTQAGKALMARTDTKMLIADWTRKDDRIADELARHGRSGVPLYLVYSAGTDASPPQILPQTLT 697          
BLAST of mRNA_P-canaliculata_contig101384.230.1 vs. uniprot
Match: A0A2G2G0W9_9PROT (Thiol:disulfide interchange protein n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2G0W9_9PROT)

HSP 1 Score: 367 bits (942), Expect = 8.640e-119
Identity = 199/339 (58.70%), Postives = 237/339 (69.91%), Query Frame = 1
Query:    1 RRAGWAYTAGVLVSFALFALVLIALKAGGASVGWGFQLQSPWLVALLALLLFAIGLNLLGVYEIGGRLQNVGQDAVGKSGPFSSFLTGVLAVIVATPCTAPFMAGAVGYALSSSAFITLAVFLALGLGFALPFLLVAYMPGLLSRLPKPGAWMETFKQFWAFPMFAAAIWLVWVLSLHAGEGGVLKLLLGGLALAFGIWLLRHKGIVAKLIGILALILAVYLPATVRSPDSVAELTSQTWSIERVASLQAEGRPIFVDFTAAWCVTCKVNEALVFNTRKTQALFDRTGTTFLVADWTNKDNVIANELKRFGRAGVPLYLVYTPGS--AEPEILPQVLTH 1011
            R  GW YT GVLVSF   A  L+ LKA GA++GWGFQLQ+P +VA LALL F I LNL G +EIGG+ QN+G D    SG   +F TGVLAVIVATPCTAPFMAGA+G+AL+  AFI+L VF ALGLGFALPFL ++Y P LL RLPKPG WMETFK   AFPM  AAIWL+WVLS    E  ++  L+  LAL F IW  + K +VAKL   L +I ++YL A + SP +   L    WS ERV  L+A G  +FVDFTA WCVTCKVNE LV +T+ TQ LF  T T  L+ADWT KD  IANEL + GR+GVPLYL+Y+  +    P+ILPQ LT+
Sbjct:  350 RTQGWFYTIGVLVSFMALATTLLVLKASGAAIGWGFQLQNPIMVAGLALLFFIIALNLFGYFEIGGKWQNIGNDTAQASGKKGAFFTGVLAVIVATPCTAPFMAGALGFALAQPAFISLIVFFALGLGFALPFLALSYAPKLLQRLPKPGPWMETFKHGLAFPMLLAAIWLMWVLSGVGDENAIIITLIIALALCFSIWCFKRKTMVAKLFAALGIITSIYLLANLSSPKTSKTL-QDAWSPERVTELRAAGHNVFVDFTARWCVTCKVNEKLVLHTKATQDLFATTNTKVLIADWTRKDARIANELAKHGRSGVPLYLLYSSNTETTSPQILPQTLTY 687          
BLAST of mRNA_P-canaliculata_contig101384.230.1 vs. uniprot
Match: A0A8J6IGK5_9PROT (Thioredoxin family protein n=2 Tax=Euryhalocaulis TaxID=1712422 RepID=A0A8J6IGK5_9PROT)

HSP 1 Score: 366 bits (939), Expect = 4.930e-118
Identity = 208/348 (59.77%), Postives = 243/348 (69.83%), Query Frame = 1
Query:    1 RRAGWAYTAGVLVSFALFALVLIALKAGGASVGWGFQLQSPWLVALLALLLFAIGLNLLGVYEIGGRLQNVGQDAV-GKSGPFSSFLTGVLAVIVATPCTAPFMAGAVGYALSSSAFITLAVFLALGLGFALPFLLVAYMPGLLSRLPKPGAWMETFKQFWAFPMFAAAIWLVWVLSLHAGEGGVLKLLLGGLALAFGIWLLRHKGI---VAKLIGILALILAVYLPATVRSPD-SVAE-------LTSQTWSIERVASLQAEGRPIFVDFTAAWCVTCKVNEALVFNTRKTQALFDRTGTTFLVADWTNKDNVIANELKRFGRAGVPLYLVYTPGSAEPEILPQVLT 1008
            RR G  +  GVLV+FA   L+L+ALKAGGA+VGWGFQLQ+P ++  LALL F I +NLLG +EIGG LQN+G   V G+SG  ++FLTGVLAVIVATPCTAPFMA A+GYALS  A   LA+FLALGLG A PF L+A+ P LL RLP+PG WM+ FKQF AFPM AA +WLVWVLS+ AG  GV   L+G LA  F IW  R        A L  ++A +L V   A + +   SVAE       L+S+ WS ERVA LQAEGRPIFVDFTAAWC+TC+VNE     T    A F +    FLVADWTNKD  IA EL+RFGRAGVPLYL Y PG   PEILPQ+LT
Sbjct:  364 RRHGLLFMGGVLVTFAALGLLLVALKAGGAAVGWGFQLQNPAVIMALALLFFLISMNLLGFFEIGGGLQNLGSGLVAGRSGGAAAFLTGVLAVIVATPCTAPFMAAALGYALSLPALGALAIFLALGLGLAAPFTLLAFFPALLRRLPRPGPWMDRFKQFMAFPMLAATVWLVWVLSIQAGPTGVAFALIGLLAAGFAIWAGRFXXXXXXAAALGAMIAALLTVPAAAQLSTGGASVAETSGAPGALSSEPWSRERVAQLQAEGRPIFVDFTAAWCITCQVNERTALKTSDVAAAFAQNDVAFLVADWTNKDAEIAAELERFGRAGVPLYLYYPPGGGAPEILPQILT 711          
BLAST of mRNA_P-canaliculata_contig101384.230.1 vs. uniprot
Match: A0A848V3W7_9PROT (Thiol:disulfide interchange protein n=1 Tax=Hellea sp. TaxID=2715692 RepID=A0A848V3W7_9PROT)

HSP 1 Score: 365 bits (936), Expect = 6.660e-118
Identity = 190/338 (56.21%), Postives = 233/338 (68.93%), Query Frame = 1
Query:    1 RRAGWAYTAGVLVSFALFALVLIALKAGGASVGWGFQLQSPWLVALLALLLFAIGLNLLGVYEIGGRLQNVGQDAVGKSGPFSSFLTGVLAVIVATPCTAPFMAGAVGYALSSSAFITLAVFLALGLGFALPFLLVAYMPGLLSRLPKPGAWMETFKQFWAFPMFAAAIWLVWVLSLHAGEGGVLKLLLGGLALAFGIWLLRHKGIVAKLIGILALILAVYLPATVRSPDSVAELTSQTWSIERVASLQAEGRPIFVDFTAAWCVTCKVNEALVFNTRKTQALFDRTGTTFLVADWTNKDNVIANELKRFGRAGVPLYLVYTPGSAE--PEILPQVLT 1008
            RR  W YT G++ SF L   +++ LKAGG+SVGW F  Q P +V +LA+LLFAIGLNLLGV+E+ G  QN GQ    K G   SF TGVLAVIVATPC APFMAGA GYA++ S      +FL LG+GFALP+LL+AY+P L  +LPKPG WM  FK+F AFPMF A IWL+WVL   +G  G+  LL   L L F IWLL      AK +G++AL+    +   +       E   + WS ERVA L+A+G P+FVDFTAAWCV CKVNE  V NT + + LF  TGT FL+ADWTN+D VIA+EL +FGRAGVPLYL+Y PG+ +  PEILPQ+LT
Sbjct:  350 RRDAWMYTIGIIASFLLMTALILMLKAGGSSVGWAFHFQDPRVVGVLAILLFAIGLNLLGVFEVAGGFQNTGQSLTQKGGLVGSFFTGVLAVIVATPCMAPFMAGAAGYAITQSPSSAAIIFLTLGIGFALPYLLIAYIPALSRKLPKPGDWMVKFKEFLAFPMFGAVIWLIWVLVQQSGAEGLWMLLTAMLVLGFAIWLLHQNWQWAKALGVIALLAMAAITIALHPRQISTE--GEKWSAERVAELRAQGNPVFVDFTAAWCVPCKVNEGRVLNTTEIKELFSETGTRFLIADWTNRDPVIADELAKFGRAGVPLYLLYPPGNNDVMPEILPQILT 685          
BLAST of mRNA_P-canaliculata_contig101384.230.1 vs. uniprot
Match: A0A2G2MJG4_9PROT (Thiol:disulfide interchange protein n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2MJG4_9PROT)

HSP 1 Score: 362 bits (930), Expect = 6.490e-117
Identity = 192/343 (55.98%), Postives = 243/343 (70.85%), Query Frame = 1
Query:    1 RRAGWAYTAGVLVSFALFALVLIALKAGGASVGWGFQLQSPWLVALLALLLFAIGLNLLGVYEIGGRLQNVGQDAVGKSGPFSSFLTGVLAVIVATPCTAPFMAGAVGYALSSSAFITLAVFLALGLGFALPFLLVAYMPGLLSRLPKPGAWMETFKQFWAFPMFAAAIWLVWVLSLHAGEGGVLKLLLGGLALAFGIWLLRHKGIVAKLIGILALILAVYLPATVRSP---DSVAELT-SQTWSIERVASLQAEGRPIFVDFTAAWCVTCKVNEALVFNTRKTQALFDRTGTTFLVADWTNKDNVIANELKRFGRAGVPLYLVYTPGS--AEPEILPQVLTH 1011
            R  GW Y  GV++SF   A V++ALKAGGASVGWGFQLQ+P LV  LALL F I +NL G ++IGG LQN G       G   +F TGVLAVIVATPCTAPFMAGA+G+A + SA  TL +F+ALG GFALPFL ++Y P LL RLPKPG WM+ FKQF AFPM  AA+WL+WVLS+  G  GVL++    L L F IWL + KG+ AK++  ++++ + YL   +R       +AEL  +Q WS ERVA L++EG+ +FV+FTAAWCV+CKVN+ LV   R T  LF RT T  L+ADWT +D+ I  EL R GR+GVPLYLVY PG+   +P++LPQVL++
Sbjct:  350 RAHGWLYALGVMLSFLALAAVILALKAGGASVGWGFQLQNPVLVGALALLFFVIAMNLFGFFDIGGHLQNTGSGLATSGGYKGAFFTGVLAVIVATPCTAPFMAGALGFAFAQSAVTTLLIFIALGAGFALPFLALSYAPALLKRLPKPGPWMDVFKQFLAFPMLGAAVWLIWVLSVQTGADGVLRVTGAMLLLGFAIWLWKRKGVFAKILLAVSVLTSGYLVYNLRVATYEQGLAELPKAQAWSPERVAQLRSEGKIVFVNFTAAWCVSCKVNDKLVLQRRATIELFARTNTVMLIADWTRRDDRITAELTRHGRSGVPLYLVYPPGTHKVDPQLLPQVLSY 692          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig101384.230.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0016756C6A6.130e-15871.47thioredoxin family protein n=1 Tax=Litorimonas cla... [more]
UPI000429C37C8.370e-13762.87thioredoxin family protein n=1 Tax=Hellea balneole... [more]
A0A420WLH6_9PROT1.170e-13059.71Thiol:disulfide interchange protein DsbD n=1 Tax=L... [more]
A0A2G1YTX5_9PROT2.690e-12458.89Thiol:disulfide interchange protein n=2 Tax=Robigi... [more]
A0A7V5NW26_9PROT2.390e-12258.02Thiol:disulfide interchange protein n=1 Tax=Hellea... [more]
A0A2G2IZM1_9PROT1.950e-12059.00Thiol:disulfide interchange protein n=1 Tax=Robigi... [more]
A0A2G2G0W9_9PROT8.640e-11958.70Thiol:disulfide interchange protein n=1 Tax=Robigi... [more]
A0A8J6IGK5_9PROT4.930e-11859.77Thioredoxin family protein n=2 Tax=Euryhalocaulis ... [more]
A0A848V3W7_9PROT6.660e-11856.21Thiol:disulfide interchange protein n=1 Tax=Hellea... [more]
A0A2G2MJG4_9PROT6.490e-11755.98Thiol:disulfide interchange protein n=1 Tax=Robigi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig101384contigP-canaliculata_contig101384:2..1012 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score415.6
Seed ortholog evalue2.2e-113
Seed eggNOG ortholog1121948.AUAC01000008_gene839
Preferred namedsbD
KEGG koko:K04084
KEGG TC5.A.1.1
EggNOG free text desc.to be involved in C-type cytochrome biogenesis
EggNOG OGs1MU8W@1224,2TTUM@28211,43WGD@69657,COG4232@1,COG4232@2,COG4233@1,COG4233@2
EC1.8.1.8
COG Functional cat.CO
Best tax levelHyphomonadaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03110
Hectar predicted targeting categorysignal peptide
Exons1
Model size1011
Cds size1011
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815587.507853-CDS-P-canaliculata_contig101384:1..10121622815587.507853-CDS-P-canaliculata_contig101384:1..1012Pelvetia canaliculata dioeciousCDSP-canaliculata_contig101384 2..1012 +
1693494152.5062828-CDS-P-canaliculata_contig101384:1..10121693494152.5062828-CDS-P-canaliculata_contig101384:1..1012Pelvetia canaliculata dioeciousCDSP-canaliculata_contig101384 2..1012 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig101384.230.1prot_P-canaliculata_contig101384.230.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig101384 2..1012 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig101384.230.1

>prot_P-canaliculata_contig101384.230.1 ID=prot_P-canaliculata_contig101384.230.1|Name=mRNA_P-canaliculata_contig101384.230.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=337bp
RRAGWAYTAGVLVSFALFALVLIALKAGGASVGWGFQLQSPWLVALLALL
LFAIGLNLLGVYEIGGRLQNVGQDAVGKSGPFSSFLTGVLAVIVATPCTA
PFMAGAVGYALSSSAFITLAVFLALGLGFALPFLLVAYMPGLLSRLPKPG
AWMETFKQFWAFPMFAAAIWLVWVLSLHAGEGGVLKLLLGGLALAFGIWL
LRHKGIVAKLIGILALILAVYLPATVRSPDSVAELTSQTWSIERVASLQA
EGRPIFVDFTAAWCVTCKVNEALVFNTRKTQALFDRTGTTFLVADWTNKD
NVIANELKRFGRAGVPLYLVYTPGSAEPEILPQVLTH
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mRNA from alignment at P-canaliculata_contig101384:2..1012+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig101384.230.1 ID=mRNA_P-canaliculata_contig101384.230.1|Name=mRNA_P-canaliculata_contig101384.230.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1011bp|location=Sequence derived from alignment at P-canaliculata_contig101384:2..1012+ (Pelvetia canaliculata dioecious)
CGCCGTGCGGGGTGGGCATACACGGCAGGCGTGCTCGTCAGTTTCGCGCT TTTCGCTTTGGTCCTGATCGCGTTAAAAGCGGGCGGCGCCTCTGTCGGGT GGGGGTTCCAGTTGCAGTCCCCTTGGCTCGTCGCGCTGCTGGCCTTGCTG CTCTTTGCTATCGGGTTGAACCTGCTGGGCGTCTATGAAATCGGCGGGCG TTTGCAGAATGTCGGTCAAGACGCCGTGGGTAAATCCGGTCCGTTCAGCT CTTTCCTCACGGGTGTCCTCGCCGTTATTGTCGCGACGCCGTGTACGGCC CCCTTCATGGCGGGCGCTGTAGGATATGCCCTGTCGAGTTCAGCCTTTAT CACGCTAGCGGTTTTCCTTGCGCTGGGGCTTGGCTTCGCGCTGCCCTTTC TGCTTGTCGCTTACATGCCGGGCCTTCTTTCGCGTTTGCCGAAACCGGGT GCCTGGATGGAGACGTTTAAACAGTTTTGGGCCTTCCCCATGTTCGCGGC AGCCATTTGGCTCGTCTGGGTCCTGAGCCTGCACGCGGGCGAAGGTGGCG TGCTGAAACTGCTCCTCGGCGGATTGGCGCTGGCTTTCGGTATTTGGCTG TTACGGCATAAAGGCATTGTCGCGAAACTCATCGGCATATTGGCACTCAT CCTCGCGGTTTATTTGCCCGCCACCGTGCGCTCGCCGGACTCCGTTGCGG AACTGACCTCTCAAACGTGGTCGATTGAACGTGTCGCAAGTCTGCAGGCG GAAGGTCGCCCGATCTTTGTCGATTTTACGGCCGCGTGGTGCGTCACGTG CAAAGTTAATGAAGCGCTCGTATTCAACACACGGAAGACACAAGCCTTGT TTGATCGGACGGGCACGACGTTCCTCGTCGCGGATTGGACGAATAAGGAC AATGTCATTGCGAATGAATTGAAACGGTTTGGCCGCGCGGGCGTGCCGCT TTATCTCGTCTACACGCCGGGGTCCGCAGAGCCAGAAATCCTGCCGCAGG TTCTGACCCAT
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Coding sequence (CDS) from alignment at P-canaliculata_contig101384:2..1012+

>mRNA_P-canaliculata_contig101384.230.1 ID=mRNA_P-canaliculata_contig101384.230.1|Name=mRNA_P-canaliculata_contig101384.230.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2022bp|location=Sequence derived from alignment at P-canaliculata_contig101384:2..1012+ (Pelvetia canaliculata dioecious)
CGCCGTGCGGGGTGGGCATACACGGCAGGCGTGCTCGTCAGTTTCGCGCT
TTTCGCTTTGGTCCTGATCGCGTTAAAAGCGGGCGGCGCCTCTGTCGGGT
GGGGGTTCCAGTTGCAGTCCCCTTGGCTCGTCGCGCTGCTGGCCTTGCTG
CTCTTTGCTATCGGGTTGAACCTGCTGGGCGTCTATGAAATCGGCGGGCG
TTTGCAGAATGTCGGTCAAGACGCCGTGGGTAAATCCGGTCCGTTCAGCT
CTTTCCTCACGGGTGTCCTCGCCGTTATTGTCGCGACGCCGTGTACGGCC
CCCTTCATGGCGGGCGCTGTAGGATATGCCCTGTCGAGTTCAGCCTTTAT
CACGCTAGCGGTTTTCCTTGCGCTGGGGCTTGGCTTCGCGCTGCCCTTTC
TGCTTGTCGCTTACATGCCGGGCCTTCTTTCGCGTTTGCCGAAACCGGGT
GCCTGGATGGAGACGTTTAAACAGTTTTGGGCCTTCCCCATGTTCGCGGC
AGCCATTTGGCTCGTCTGGGTCCTGAGCCTGCACGCGGGCGAAGGTGGCG
TGCTGAAACTGCTCCTCGGCGGATTGGCGCTGGCTTTCGGTATTTGGCTG
TTACGGCATAAAGGCATTGTCGCGAAACTCATCGGCATATTGGCACTCAT
CCTCGCGGTTTATTTGCCCGCCACCGTGCGCTCGCCGGACTCCGTTGCGG
AACTGACCTCTCAAACGTGGTCGATTGAACGTGTCGCAAGTCTGCAGGCG
GAAGGTCGCCCGATCTTTGTCGATTTTACGGCCGCGTGGTGCGTCACGTG
CAAAGTTAATGAAGCGCTCGTATTCAACACACGGAAGACACAAGCCTTGT
TTGATCGGACGGGCACGACGTTCCTCGTCGCGGATTGGACGAATAAGGAC
AATGTCATTGCGAATGAATTGAAACGGTTTGGCCGCGCGGGCGTGCCGCT
TTATCTCGTCTACACGCCGGGGTCCGCAGAGCCAGAAATCCTGCCGCAGG
TTCTGACCCATCGCCGTGCGGGGTGGGCATACACGGCAGGCGTGCTCGTC
AGTTTCGCGCTTTTCGCTTTGGTCCTGATCGCGTTAAAAGCGGGCGGCGC
CTCTGTCGGGTGGGGGTTCCAGTTGCAGTCCCCTTGGCTCGTCGCGCTGC
TGGCCTTGCTGCTCTTTGCTATCGGGTTGAACCTGCTGGGCGTCTATGAA
ATCGGCGGGCGTTTGCAGAATGTCGGTCAAGACGCCGTGGGTAAATCCGG
TCCGTTCAGCTCTTTCCTCACGGGTGTCCTCGCCGTTATTGTCGCGACGC
CGTGTACGGCCCCCTTCATGGCGGGCGCTGTAGGATATGCCCTGTCGAGT
TCAGCCTTTATCACGCTAGCGGTTTTCCTTGCGCTGGGGCTTGGCTTCGC
GCTGCCCTTTCTGCTTGTCGCTTACATGCCGGGCCTTCTTTCGCGTTTGC
CGAAACCGGGTGCCTGGATGGAGACGTTTAAACAGTTTTGGGCCTTCCCC
ATGTTCGCGGCAGCCATTTGGCTCGTCTGGGTCCTGAGCCTGCACGCGGG
CGAAGGTGGCGTGCTGAAACTGCTCCTCGGCGGATTGGCGCTGGCTTTCG
GTATTTGGCTGTTACGGCATAAAGGCATTGTCGCGAAACTCATCGGCATA
TTGGCACTCATCCTCGCGGTTTATTTGCCCGCCACCGTGCGCTCGCCGGA
CTCCGTTGCGGAACTGACCTCTCAAACGTGGTCGATTGAACGTGTCGCAA
GTCTGCAGGCGGAAGGTCGCCCGATCTTTGTCGATTTTACGGCCGCGTGG
TGCGTCACGTGCAAAGTTAATGAAGCGCTCGTATTCAACACACGGAAGAC
ACAAGCCTTGTTTGATCGGACGGGCACGACGTTCCTCGTCGCGGATTGGA
CGAATAAGGACAATGTCATTGCGAATGAATTGAAACGGTTTGGCCGCGCG
GGCGTGCCGCTTTATCTCGTCTACACGCCGGGGTCCGCAGAGCCAGAAAT
CCTGCCGCAGGTTCTGACCCAT
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