prot_P-canaliculata_contig10121.209.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10121.209.1
Unique Nameprot_P-canaliculata_contig10121.209.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length207
Homology
BLAST of mRNA_P-canaliculata_contig10121.209.1 vs. uniprot
Match: A0A6H5KJA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA8_9PHAE)

HSP 1 Score: 244 bits (624), Expect = 1.620e-78
Identity = 115/180 (63.89%), Postives = 139/180 (77.22%), Query Frame = 0
Query:   27 FIVQGKLESVRRDYQGLFSCLEEMCLSGRGDFEIEAVGSSGSMLNELDRHPCTNARYKEGRDLRYSDFYSRISAGHFVVTATAGHDYEFDRATSSVPTALLLERPLVMSSALLDAYPCLKNSRVHRMVANDDLCLNLHAAYDLTQADYDEMELEARDCKLRMWKQTRETVAEMVSGWVVD 206
            F+VQG ++S RR+Y  L  CLE MC +GR ++++ AVG+ G + +++ R  C   R  E R L Y +FY+ ISA HFVVTA AGHDYE+D+ATS+VPTALLLERPLV+SS LLDAYPCL+ SRVH MVANDDLCLNL  AYDLT  +YDEMELEARDCKL MW+  RETVA M SGW +D
Sbjct:   86 FVVQGNMQSHRRNYPELTRCLEAMCSTGRDNYQLVAVGARGDLPDDVRRMQCVEQRTTEWRHLEYPEFYANISAAHFVVTAAAGHDYEYDKATSTVPTALLLERPLVISSTLLDAYPCLRKSRVHSMVANDDLCLNLQTAYDLTTEEYDEMELEARDCKLEMWRHARETVAGMASGWTLD 265          
BLAST of mRNA_P-canaliculata_contig10121.209.1 vs. uniprot
Match: D8LSI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI3_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 1.030e-75
Identity = 110/174 (63.22%), Postives = 134/174 (77.01%), Query Frame = 0
Query:   33 LESVRRDYQGLFSCLEEMCLSGRGDFEIEAVGSSGSMLNELDRHPCTNARYKEGRDLRYSDFYSRISAGHFVVTATAGHDYEFDRATSSVPTALLLERPLVMSSALLDAYPCLKNSRVHRMVANDDLCLNLHAAYDLTQADYDEMELEARDCKLRMWKQTRETVAEMVSGWVVD 206
            ++S RR+Y  L  CLE MC +GR ++++ AVG+ G + +++    C   R  E R L Y +FY+ ISAGHFVVTA AGH YE+D+ATS+VPTALLLERPLVMSS LLDAYPCL+ SRVH MVANDDLC+NL  AYDLT+ +YDEMELEARDCKL MW+  RETVA M SGW +D
Sbjct:    1 MQSHRRNYPELTRCLEAMCSTGRDNYQLVAVGARGDLPDDVSAMQCVEQRTTEWRHLEYPEFYANISAGHFVVTAAAGHGYEYDKATSTVPTALLLERPLVMSSTLLDAYPCLRKSRVHSMVANDDLCVNLQTAYDLTREEYDEMELEARDCKLEMWRHARETVAGMASGWTLD 174          
BLAST of mRNA_P-canaliculata_contig10121.209.1 vs. uniprot
Match: A0A482SHX3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SHX3_9ARCH)

HSP 1 Score: 79.0 bits (193), Expect = 1.190e-13
Identity = 52/183 (28.42%), Postives = 90/183 (49.18%), Query Frame = 0
Query:   26 RFIVQGKLE-SVRRDYQGLFSCLEEMCLSGRGDFEIEAVGSSGSMLNELD-----RHPCTNARYKEGRDLRYSDFYSRISAGHFVVTATAGHDYEFDRATSSVPTALLLERPLVMSSALLDAYPCLKNSRVHRMVANDDLCLNLHAAYDLTQADYDEMELEARDCKLRMWKQTRETVAEMVSG 202
            RFI+QG L    RRD+  LF+C+ E  +  R D E+  +G   ++   L       +  T  ++ +     Y  F+  +S+  + +  +    YE  R TSS+PT+L+   P+++ + LL  Y CL+N  VHR  +  D C ++ A   L      +M  E   C  ++  ++R T+ ++V G
Sbjct:  213 RFILQGILTPGKRRDFNRLFACMIE--IKRRHDIELVLIGKVATLGANLTIPLKLSNITTVVKWPD-----YLGFFRNVSSADYAILFSKFDFYEHGRITSSIPTSLVSNLPIILPNKLLSDYACLRNQYVHRATSMADDCSSVKAVLSLRHERQQQMRNEVAFCVKQLLIESRATLHDIVFG 388          
BLAST of mRNA_P-canaliculata_contig10121.209.1 vs. uniprot
Match: A0A482SI13_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SI13_9ARCH)

HSP 1 Score: 72.4 bits (176), Expect = 1.480e-12
Identity = 40/100 (40.00%), Postives = 57/100 (57.00%), Query Frame = 0
Query:   87 RDLRYSDFYSRISAGHFVVT-ATAGHDYEFDRATSSVPTALLLERPLVMSSALLDAYPCLKNSRVHRMVANDDLCLNLHAAYDLTQADYDEMELEARDCK 185
            R + +  FY  I+   F+VT A   ++Y   RA+SS+PTA++ E PLV+++ LL+ Y CL    +HR VA+ D C  L  A  LT  +   M  E R CK
Sbjct:   15 RAVAHPYFYGAIARADFLVTFANPAYEYNITRASSSIPTAVMTEVPLVLTTDLLNKYDCLYGGSIHRRVADTDDCKALKNAIQLTDQERKTMREEIRRCK 114          
BLAST of mRNA_P-canaliculata_contig10121.209.1 vs. uniprot
Match: A0A482SBI1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SBI1_9ARCH)

HSP 1 Score: 74.3 bits (181), Expect = 1.860e-12
Identity = 54/185 (29.19%), Postives = 84/185 (45.41%), Query Frame = 0
Query:   12 FGSDVVEGGRRTVARFIV-QGKLESVRRDYQGLFSCLEEMCLSGRGDFE----IEAVGSSGSMLNELDRHPCTNARYKE----GRDLRYSDFYSRISAGHFVVTATAGHD--YEFDRATSSVPTALLLERPLVMSSALLDAYPCLKNSRVHRMVANDDLCLNLHAAYDLTQADYDEMELEARDCK 185
             G   VEG      R +V  G +   RRDY GLF+C++E+  S     +     + V +  S L   D         ++      DL    + + ++  +FV+     +   Y  +R +S+VPTAL +  PLV+  A L  Y CLK+S +H  VA    C ++  A  L+ AD + M  E   C+
Sbjct:   48 LGESKVEGTLNNNTRLLVLPGTIRYNRRDYTGLFTCVDEISKSANDSTQKSLNFKVVVTGRSYLKAADGRVYIPEHLRQLIEIQADLPLQSYLTLLAQANFVLLFANNNQLGYNTNRISSTVPTALGVTTPLVLPQATLSLYACLKSSSMHNRVAGKTNCDSMKNALSLSHADAERMRQETALCR 232          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10121.209.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KJA8_9PHAE1.620e-7863.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSI3_ECTSI1.030e-7563.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A482SHX3_9ARCH1.190e-1328.42Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A482SI13_9ARCH1.480e-1240.00Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A482SBI1_9ARCH1.860e-1229.19Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10121contigP-canaliculata_contig10121:6716..9048 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10121.209.1mRNA_P-canaliculata_contig10121.209.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10121 1231..10794 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10121.209.1 ID=prot_P-canaliculata_contig10121.209.1|Name=mRNA_P-canaliculata_contig10121.209.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=207bp
MRVPRPSGRKKFGSDVVEGGRRTVARFIVQGKLESVRRDYQGLFSCLEEM
CLSGRGDFEIEAVGSSGSMLNELDRHPCTNARYKEGRDLRYSDFYSRISA
GHFVVTATAGHDYEFDRATSSVPTALLLERPLVMSSALLDAYPCLKNSRV
HRMVANDDLCLNLHAAYDLTQADYDEMELEARDCKLRMWKQTRETVAEMV
SGWVVD*
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