prot_P-canaliculata_contig10118.207.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-canaliculata_contig10118.207.1
Unique Name	prot_P-canaliculata_contig10118.207.1
Type	polypeptide
Organism	Pelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length	305

Homology

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BLAST of mRNA_P-canaliculata_contig10118.207.1 vs. uniprot
Match: A0A6H5KJN3_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN3_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 2.050e-73
Identity = 139/322 (43.17%), Postives = 188/322 (58.39%), Query Frame = 0

Query:    1 LGRNLFSVKQASRNGVVSIFGKHNPRLEAKNFTLPL--QELENDLYFP-PLDIVIGSS---------APELAMQAAATATLWHRRMGYLNRKSLDILKKVNNNRVSFDGTVPDCDVCAVGKSRQRAHPKTANQQV-----LVFTDLMGQFIPEALGGYKYVSKISDEHTRLTEIYLLKSKDGALHAYQSFVQSMVIPSGVHVERLRMDKVGKFIGNDFKDYCTQTGVFQEYVSTNTPQQIGMSERVGGTLAAMVRCMLADSRLSRFLWGELMFTAVYVGNSAPHSALNMQSPYKILTGAEPDLRILCIIGARAFVHIERRTK 305
            LG NLFSV  A  NGV S+F   NPRLE+ +  +P+  Q ++N       + I +G+           P+       TA LWHRRMG++N KSLD+L++   + + + G V DC  C +GKS Q+ HPK A   V     LVF D +G F P ALGG+KY +K  D+HT+  E+ L+K K  ++ A + F +  VIP    +  LR DK  +F    ++ YC   G+  ++ S NTP QIG +ER G T+  +VRCMLADS L   LWGELM TAVY+ N  PH+AL+  +PYK L G +  L  L ++GARAFVH E  TK
Sbjct:  495 LGTNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLALRVETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNGTPYKALFGTDAHLGHLRVVGARAFVHEETHTK 816

[Close]

BLAST of mRNA_P-canaliculata_contig10118.207.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 251 bits (641), Expect = 5.950e-72
Identity = 138/322 (42.86%), Postives = 187/322 (58.07%), Query Frame = 0

Query:    1 LGRNLFSVKQASRNGVVSIFGKHNPRLEAKNFTLPL--QELENDLYFP-PLDIVIGSS---------APELAMQAAATATLWHRRMGYLNRKSLDILKKVNNNRVSFDGTVPDCDVCAVGKSRQRAHPKTANQQV-----LVFTDLMGQFIPEALGGYKYVSKISDEHTRLTEIYLLKSKDGALHAYQSFVQSMVIPSGVHVERLRMDKVGKFIGNDFKDYCTQTGVFQEYVSTNTPQQIGMSERVGGTLAAMVRCMLADSRLSRFLWGELMFTAVYVGNSAPHSALNMQSPYKILTGAEPDLRILCIIGARAFVHIERRTK 305
            LG NLFSV  A  NGV S+F   NPRLE+ +  +P+  Q ++N       + I +G+           P+       TA LWHRRMG++N KSLD+L++   + + + G V DC  C +GKS Q+ HPK A   V     LVF D +G F P ALGG+KY +K  D+HT+  E+ L+K K  ++ A + F +  VIP    +  LR DK  +F    ++ YC   G+  ++ S NTP QIG +ER G T+  +VRCMLADS L   LWGELM TAVY+ N  PH+AL+  +P K L G +  L  L ++GARAFVH E  TK
Sbjct:  495 LGNNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLALRVETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNGTPNKALFGTDAHLGHLRVVGARAFVHEETHTK 816

[Close]

BLAST of mRNA_P-canaliculata_contig10118.207.1 vs. uniprot
Match: A0A6H5KXM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXM1_9PHAE)

HSP 1 Score: 246 bits (629), Expect = 7.660e-72
Identity = 138/323 (42.72%), Postives = 188/323 (58.20%), Query Frame = 0

Query:    2 GRNLFSVKQASRNGVVSIFGKHNPRLEAKNFTLPLQELEND------LYF--------PPLDIVIGSSAPELAMQAAATATLWHRRMGYLNRKSLDILKKVNNNRVSFDGTVPDCDVCAVGKSRQRAHPKTANQQVL-----VFTDLMGQFIPEALGGYKYVSKISDEHTRLTEIYLLKSKDGALHAYQSFVQSMVIPSGVHVERLRMDKVGKFIGNDFKDYCTQTGVFQEYVSTNTPQQIGMSERVGGTLAAMVRCMLADSRLSRFLWGELMFTAVYVGNSAPHSALNMQSPYKILTGAEPDLRILCIIGARAFVHIERRTK 305
            G NLFSV  A   GV ++F   NPRLE+ +   P+Q L  D      +Y         P    V+G +   LA++  + A LWHRRMG++N KSLD+L+K   N V + G V DC VC +GKS Q+ HPK     VL     V  D +G F P ALGG+KY +K  D+ T+  EI L+K +  ++ +   F +  V+P+G  +  LR D   +F   +F+ YC   G+  E+ S NTPQQ+G +ER G T+  +VRC+LADS L  FLWGEL+ TAVY+ N  PH+AL   +PYK L G +  L  L +IG+RAFVH E  T+
Sbjct:  208 GTNLFSVTLAMLKGVETLFHPDNPRLESGDVVFPMQTLGVDATTGKRIYSIEVKLGGEPGGPTVLGDAPDALALKVES-ADLWHRRMGHINGKSLDVLRKEPVNGVDYTGNVNDCCVCPLGKSAQQPHPKQVTYGVLRPFQHVSVDTLGPFTPTALGGFKYATKFVDQQTKWAEIVLMKDQACSVDSLALFKKGTVVPTGERIHCLRGDPGTEFTSAEFRQYCQDIGIKLEFASPNTPQQMGANERAGRTVLNVVRCLLADSTLPNFLWGELIQTAVYLSNRVPHAALQNGTPYKALYGKDAYLGHLRVIGSRAFVHEETHTR 529

[Close]

BLAST of mRNA_P-canaliculata_contig10118.207.1 vs. uniprot
Match: A0A6H5JYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB5_9PHAE)

HSP 1 Score: 242 bits (617), Expect = 5.790e-69
Identity = 135/323 (41.80%), Postives = 183/323 (56.66%), Query Frame = 0

Query:    1 LGRNLFSVKQASRNGVVSIFGKHNPRLEAKNFTLPL--QELENDLYFP-PLDIVIGSS---------APELAMQAAATATLWHRRMGYLNRKSLDILKKVNNNRVSFDGTVPDCDVCAVGKSRQRAHPKTANQQV-----LVFTDLMGQFIPEALGGYKYVSKISDEHTRLTEIYLLKSKDG-ALHAYQSFVQSMVIPSGVHVERLRMDKVGKFIGNDFKDYCTQTGVFQEYVSTNTPQQIGMSERVGGTLAAMVRCMLADSRLSRFLWGELMFTAVYVGNSAPHSALNMQSPYKILTGAEPDLRILCIIGARAFVHIERRTK 305
            LG NLFSV  A  NGV S+F   NPRLE+ +  +P+  Q ++N       + I +G+           P+       TA LWHRRMG++N KSLD+L++   + + + G V DC  C +GKS Q+ HPK A   V     LVF D  G F    LGG+KY +K  D+HT+  E+ L+K K   ++   + F +  VIP    +  LR  K  +F    ++ YC   G+  ++ S NTP QIG +ER G T+  +VRCMLADS L   LWGELM TAVY+ N  PH+AL+  +PYK L G +  L  L ++GARAFVH E  TK
Sbjct:  400 LGTNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLALRVETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTFGPFTSTTLGGFKYATKFVDQHTKWKEVVLMKDKTSCSIDGLELFNKGTVIPRSARIHVLRAGKGAEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNGTPYKALFGTDAHLGHLRVVGARAFVHEETHTK 722

[Close]

BLAST of mRNA_P-canaliculata_contig10118.207.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 241 bits (614), Expect = 2.430e-68
Identity = 134/322 (41.61%), Postives = 182/322 (56.52%), Query Frame = 0

Query:    1 LGRNLFSVKQASRNGVVSIFGKHNPRLEAKNFTLPL--QELENDLYFP-PLDIVIGSS---------APELAMQAAATATLWHRRMGYLNRKSLDILKKVNNNRVSFDGTVPDCDVCAVGKSRQRAHPKTANQQV-----LVFTDLMGQFIPEALGGYKYVSKISDEHTRLTEIYLLKSKDGALHAYQSFVQSMVIPSGVHVERLRMDKVGKFIGNDFKDYCTQTGVFQEYVSTNTPQQIGMSERVGGTLAAMVRCMLADSRLSRFLWGELMFTAVYVGNSAPHSALNMQSPYKILTGAEPDLRILCIIGARAFVHIERRTK 305
            LG NLFSV  A  NGV S+F   NPRLE+ +  +P+  Q ++N       + I +G+           P+       TA LWHRRMG++N KSLD+L++   + + + G V DC  C +GKS Q+ HPK A   V     LVF D +G F P ALGG+KY +K  D+HT+  E+ L+K K  ++ A + F +  VIP    +  LR DK  +F    ++ YC   G+  ++ S NTP QIG +ER G T+  +VRCMLADS L   LWGELM TAVY+ N  PH+AL+           +  L  L ++GARAFVH E  TK
Sbjct:  617 LGTNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLPLRVETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNXXXXXXXFSTDAHLGHLRVVGARAFVHEETHTK 938

[Close]

BLAST of mRNA_P-canaliculata_contig10118.207.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 1.010e-65
Identity = 124/293 (42.32%), Postives = 173/293 (59.04%), Query Frame = 0

Query:   15 GVVSIFGKHNPRLEAKNFTLPLQELENDLYFPPLDIVIGSSAPELAMQAAATATLWHRRMGYLNRKSLDILKKVNNNRVSFDGTVPDCDVCAVGKSRQRAHPKTANQQVL--VFTDLMGQFIPEALGGYKYVSKISDEHTRLTEIYLLKSKDGALHAYQSFVQSMVIPSGVHVERLRMDKVGKFIGNDFKDYCTQTGVFQEYVSTNTPQQIGMSERVGGTLAAMVRCMLADSRLSRFLWGELMFTAVYVGNSAPHSALNMQSPYKILTGAEPDLRILCIIGARAFVHIERRTK 305
            GV ++F   NPRLE+ +   P+Q L        +D   G     + +++A    LWHRRMG++N K+LD+L+K   N V + G V  C VC +GKS Q+ HPK A   VL     D +G F P ALGG KY +K  D+ T+  EI L+K +  ++ +   F +  V+P+G  +  LR D+  +F   +F+ YC   G+  E+ S N PQQIG +ER G T+  +VRC+LADS L  FLWGEL+ TAVY+ N  PH+AL   +PYK L G +  L  L +IG+RAFVH E  T+
Sbjct:    4 GVATLFHPDNPRLESGDVFFPMQTLG-------VDATTGKRIYSIKVESA---DLWHRRMGHINGKNLDVLRKEQVNGVDYTGDVKYCSVCPLGKSAQQPHPKQATYGVLRPFQHDTLGPFAPTALGGSKYATKFVDQQTKWAEIVLMKDETCSVDSLALFNKGTVVPTGERIHCLRGDQGTEFTSAEFRQYCQDIGIKLEFASPNIPQQIGANERAGRTILNVVRCLLADSTLPNFLWGELIQTAVYLSNRVPHAALQNGTPYKALYGKDAYLGHLRVIGSRAFVHEETHTR 286

[Close]

BLAST of mRNA_P-canaliculata_contig10118.207.1 vs. uniprot
Match: A0A6H5K1J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J1_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 1.190e-64
Identity = 123/297 (41.41%), Postives = 170/297 (57.24%), Query Frame = 0

Query:    2 GRNLFSVKQASRNGVVSIFGKHNPRLEAKNFTLPLQELENDLYFPPLDIVIGSSAPELAMQAAATATLWHRRMGYLNRKSLDILKKVNNNRVSFDGTVPDCDVCAVGKSRQRAHPKTANQQV-----LVFTDLMGQFIPEALGGYKYVSKISDEHTRLTEIYLLKSKDGALHAYQSFVQSMVIPSGVHVERLRMDKVGKFIGNDFKDYCTQTGVFQEYVSTNTPQQIGMSERVGGTLAAMVRCMLADSRLSRFLWGELMFTAVYVGNSAPHSALNMQSPYKILTGAEPDLRILCIIG 293
            G+  +  K A  +G   +F       E  +FT+ L E            + G + P        +A LWHRR+G+++ +SLDIL+KV  N V ++G +  CDVCAVG S+Q+ HPK A+        LV TDLMG F P ALGG+ Y+ K  D+H +  E++L+K K   + A Q F QS++ P  + +E +R DK G++    F  YC   G+   + STNTPQ+IG +ER+G TLA MVRC+LADS L  FLW EL  TA Y+ N +PHSA +  +P+K L G E  L  L  IG
Sbjct:  216 GKKPWKRKAAETSGHAVLFLNFKECDELYHFTMDLPETGE---------ISGVALP------VKSAALWHRRVGHVHGRSLDILRKVQGNGVEYNGELSACDVCAVGNSKQQNHPKRASYDASRPFQLVTTDLMGPFSPPALGGFLYIKKFVDQHIKWNEVFLMKEKSATVDALQLFNQSVLTPHELRLECVRADKGGEYTSWAFCKYCRDVGIKLLFASTNTPQRIGANERIGRTLAGMVRCLLADSGLPHFLWEELFMTASYLSNRSPHSASDNVTPFKALHGKEAYLGHLWAIG 497

[Close]

BLAST of mRNA_P-canaliculata_contig10118.207.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 1.980e-63
Identity = 124/332 (37.35%), Postives = 173/332 (52.11%), Query Frame = 0

Query:    1 LGRNLFSVKQASRNGVVSIFGKHNPRLEAKNFTLPLQELENDLYFPPLDIVIG---------SSAPELAMQAAATATL----------WHRRMGYLNRKSLDILKKVNNNRVSFDGTVPDCDVCAVGKSRQRAHPKTANQQV-----LVFTDLMGQFIPEAL---GGYKYVSKISDEHTRLTEIYLLKSKDGALHAYQSFVQSMVIPSGVHVERLRMDKVGKFIGNDFKDYCTQTGVFQEYVSTNTPQQIGMSERVGGTLAAMVRCMLADSRLSRFLWGELMFTAVYVGNSAPHSALNMQSPYKILTGAEPDLRILCIIGARAFVHIERRTK 305
            LGRN+FS     + G+  +  K  P L  +   +PL +   D     LDI            S  P        TA            WHRR+G+LN +SLDIL+K     V +  ++  C VC + K +Q  HPK + +++     LV  D MG   P A    G + Y  K++D++T++ E+YLL+ K     A  ++   +    G  +E +R DK G+  G++F+DYC  + +  EY +TNTPQQIG+SER G TLA + RC+L D      +WGELM TA Y+ N +PHSAL   +PY  L    PDL  L +IGARAFVH ER  K
Sbjct:  281 LGRNIFSPTSLLKRGLRCVGEKSTPHLTIQGKVIPLTQDPRDQGMCTLDITFEQNVQPSGTKSLVPHQKQSQTHTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTEVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKVTDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLRNKSPDLSGLRVIGARAFVHHERYRK 612

[Close]

BLAST of mRNA_P-canaliculata_contig10118.207.1 vs. uniprot
Match: A0A6H5KT84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT84_9PHAE)

HSP 1 Score: 212 bits (539), Expect = 7.420e-60
Identity = 124/343 (36.15%), Postives = 174/343 (50.73%), Query Frame = 0

Query:    1 LGRNLFSVK-----------QASRNGVVSIFGKHNPRLEAKNFTLPLQELENDLYFPPLDIVIG---------SSAPELAMQAAATATL----------WHRRMGYLNRKSLDILKKVNNNRVSFDGTVPDCDVCAVGKSRQRAHPKTANQQV-----LVFTDLMGQFIPEAL---GGYKYVSKISDEHTRLTEIYLLKSKDGALHAYQSFVQSMVIPSGVHVERLRMDKVGKFIGNDFKDYCTQTGVFQEYVSTNTPQQIGMSERVGGTLAAMVRCMLADSRLSRFLWGELMFTAVYVGNSAPHSALNMQSPYKILTGAEPDLRILCIIGARAFVHIERRTK 305
            LGRN+FS +              + G+  +  +  P L  ++  +PL +   D     LDI            S  P        TA            WHRR+G+LN +SLDIL+K     V +  ++  C VC + K +Q  HPK + +++     LV  D MG   P A    G + Y  KI+D++T++ E+YLL+ K     A  ++   +    G  +E +R DK G+  G++F+DYC  + +  EY +TNTPQQIG SER G TLA + RC+L D      +WGELM TA Y+ N +PHSAL   +PY  L    PDL  L +IGARAFVH ER  K
Sbjct:  322 LGRNIFSSRTLLLGMDFSPTSLLKKGLRCVVEESTPHLTIQDKVIPLTQDPRDQGMCTLDITFEQNVQPSGTKSLVPHQKQSQTHTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTREISRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGASERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRK 664

[Close]

BLAST of mRNA_P-canaliculata_contig10118.207.1 vs. uniprot
Match: A0A6H5JBV6_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBV6_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 1.430e-59
Identity = 113/244 (46.31%), Postives = 150/244 (61.48%), Query Frame = 0

Query:   66 TATLWHRRMGYLNRKSLDILKKVNNNRVSFDGTVPDCDVCAVGKSRQRAHPKTANQQV-----LVFTDLMGQFIPEALGGYKYVSKISDEHTRLTEIYLLKSKDGALHAYQSFVQSMVIPSGVHVERLRMDKVGKFIGNDFKDYCTQTGVFQEYVSTNTPQQIGMSERVGGTLAAMVRCMLADSRLSRFLWGELMFTAVYVGNSAPHSALNMQSPYKILTGAEPDLRILCIIGARAFVHIERRT 304
            +A LWHRRMG++N KSLDIL+K  NN V     V DC  CA+GKS Q+ HPK A   V     LVF D +G F P ALGG+KY +K  D+ T+  EI L+K K  ++ +   F +  V+P+G  +  LR D   +F   +F+ Y    G+  E+ S NTPQQIG +ER G T+  +VRC+LADS L  FLW EL+ TAVY+    PH+AL   +PYK L G +  L  L +I +RAFVH E ++
Sbjct:  525 SANLWHRRMGHINSKSLDILRKAPNNGVDHTEDVKDCGPCALGKSTQQPHPKEATYDVKRPFQLVFVDTLGPFTPTALGGFKYATKFVDQQTKWAEIGLMKDKTCSVDSLALFNKGTVVPTGEGIHCLRGDHGTEFTSAEFRQYYQDIGIKLEFASPNTPQQIGANERAGRTILNVVRCLLADSTLPNFLWWELIQTAVYLSTRVPHAALQNGTPYKALYGKDAYLGHLRVIVSRAFVHEETQS 768

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig10118.207.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig10118.207.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KJN3_9PHAE	2.050e-73	43.17	Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
A0A6H5J842_9PHAE	5.950e-72	42.86	Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
A0A6H5KXM1_9PHAE	7.660e-72	42.72	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JYB5_9PHAE	5.790e-69	41.80	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KJH6_9PHAE	2.430e-68	41.61	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KL37_9PHAE	1.010e-65	42.32	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K1J1_9PHAE	1.190e-64	41.41	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KVF6_9PHAE	1.980e-63	37.35	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KT84_9PHAE	7.420e-60	36.15	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JBV6_9PHAE	1.430e-59	46.31	Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 124..235 e-value: 2.7E-9 score: 37.2
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 112..283 score: 15.132
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 114..294 e-value: 1.8E-23 score: 84.8
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 64..110 e-value: 2.2E-6 score: 27.4
IPR039537	Retrotransposon Ty1/copia-like	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 3..285
None	No IPR available	PANTHER	PTHR11439:SF250		coord: 3..285
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 124..277

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-canaliculata_contig10118	contig	P-canaliculata_contig10118:4795..5709 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pelvetia canaliculata dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-canaliculata_contig10118.207.1	mRNA_P-canaliculata_contig10118.207.1	Pelvetia canaliculata dioecious	mRNA	P-canaliculata_contig10118 4795..5709 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-canaliculata_contig10118.207.1 ID=prot_P-canaliculata_contig10118.207.1|Name=mRNA_P-canaliculata_contig10118.207.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=305bp
LGRNLFSVKQASRNGVVSIFGKHNPRLEAKNFTLPLQELENDLYFPPLDI
VIGSSAPELAMQAAATATLWHRRMGYLNRKSLDILKKVNNNRVSFDGTVP
DCDVCAVGKSRQRAHPKTANQQVLVFTDLMGQFIPEALGGYKYVSKISDE
HTRLTEIYLLKSKDGALHAYQSFVQSMVIPSGVHVERLRMDKVGKFIGND
FKDYCTQTGVFQEYVSTNTPQQIGMSERVGGTLAAMVRCMLADSRLSRFL
WGELMFTAVYVGNSAPHSALNMQSPYKILTGAEPDLRILCIIGARAFVHI
ERRTK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001584	Integrase_cat-core
IPR036397	RNaseH_sf
IPR025724	GAG-pre-integrase_dom
IPR039537	Retrotran_Ty1/copia-like
IPR012337	RNaseH-like_sf