prot_P-canaliculata_contig10110.198.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10110.198.1
Unique Nameprot_P-canaliculata_contig10110.198.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length361
Homology
BLAST of mRNA_P-canaliculata_contig10110.198.1 vs. uniprot
Match: A0A6H5JA60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA60_9PHAE)

HSP 1 Score: 267 bits (682), Expect = 2.730e-81
Identity = 156/360 (43.33%), Postives = 214/360 (59.44%), Query Frame = 0
Query:    2 SWPSTQLQAMTNGTYFVYKLFNSVGNLFLALNRMLPVLRFLEMGIVLDSQKSFPGFRQAFEPGVIMWEIDLAPLKQRALEIEQGGNINGFHALTLVDGLIVLSDAQLELIISTMGISASSLSELVSIALRPERHPRLRSLFSKIHSSIGGQRRARPEPCTWNMFLRRSPFLLESLELHSPWLSRNGGLVPERRPAKYVGWHIRTPGGESNASYVPAVHRYIIQ-ESPEVVCPAFESATQVARTSCQEFATHD---MAVYISSNSKSLARSCIEALAEHETQGGQVDLGLGPQDAHTRFSLNPNAS-MNAFLDYVFLLDATAIIRSGSSFSGTIVTMRGFVCQPTR-VTELPERQLLACAP 355
            SWP+ Q  A+ NGT  V+ +F SVGNLF+ L  ++   R LE+ + L   K FPGFR AF+   I W++D   + Q+A E+  G  ++  + L   DG +VLS  QLE +    GI  +SL+E+ ++A++ ER   LR    ++  +I G     PE C WNM LRRSP ++ SLE H+PW     G  P  RP  YV WH+RT  GES  S+ P VH YI+  +S   V P F SAT  A   C +    D   M VYISSNSKS+AR+C    AEH+   G VDLG+   DAHT FS NPNA+ +NAF+DY++L+D++ II++GSSFS T+  ++   C+      ELP ++L  C P
Sbjct:  200 SWPAVQEAAIANGTVLVFDIFPSVGNLFITLGNLIKTARLLEVALFLKWDK-FPGFRAAFDTASIKWDLDPTTVVQKAEELTLGAEVDRLYPLKFSDGNLVLSSQQLEALAIQTGIPDTSLAEM-AVAVK-ERWSSLR----RLSQAIAGSAVVPPETCAWNMLLRRSPSMIASLEAHNPWTP--SGFGP--RPKDYVAWHVRTSDGESEHSFNPDVHTYILHGQSSTTVVPIFLSATDAAEKMCPKMFHEDAPKMPVYISSNSKSMARNCTALAAEHDVTAGFVDLGIDDLDAHTTFSKNPNATALNAFIDYLYLMDSSVIIQTGSSFSSTVARVKSLKCREVEHPPELPVKRLNVCLP 548          
BLAST of mRNA_P-canaliculata_contig10110.198.1 vs. uniprot
Match: A0A6H5L1Z7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z7_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 6.930e-78
Identity = 149/364 (40.93%), Postives = 212/364 (58.24%), Query Frame = 0
Query:    2 SWPSTQLQAMTNGTYFVYKLFNSVGNLFLALNRMLPVLRFLEMGIVLDSQKSFPGFRQAFEPGVIMWEIDLAPLKQRALEIEQGGNINGFHALTLVDGLIVLSDAQLELIISTMGISASSLSELVSIALRPERHPRLRSLFSKIHSSIGGQRRARPEPCTWNMFLRRSPFLLESLELHSPWLSRNGGLVPERRPAKYVGWHIRTPGGESNASYVPAVHRYII-QESPEVVCPAFESATQVARTSCQEFATHDMA---VYISSNSKSLARSCI----EALAEHETQGGQVDLGLGPQDAHTRFSLNPNAS-MNAFLDYVFLLDATAIIRSGSSFSGTIVTMRGFVCQPTRVTE-LPERQLLACAP 355
            SWPS Q  A+  GT  V+ +F SVGN+F+ L+ ++   R LE+ ++L+ Q+ F GFR+AF+P  I W++D   L Q+A    QG      +  T  DG +VLS  QLE I   +G+  +S+ E+   A   E + ++  L      ++  +R +   PC WNM LRRSP ++ SLE H+PW++         RP KYV WHIRT  GE+N S+ P VH YI  ++S   V P F SAT  A   C  F   D+    VYISSNSK++AR+C        AEH+   G VDLG+   DAHT FS NP A+ +NAF+DY++L+D++ I+++GSSFS T+ +++G  C      E LP + L  C P
Sbjct:   14 SWPSVQEAAVARGTVVVFNVFPSVGNMFVILHNIIKTARLLEVALLLNWQR-FEGFREAFDPASIKWDLDQPTLVQQAAPRSQGAEAERLYPFTFPDGQMVLSHWQLETIARKVGLPGTSVDEMA--AALEEGYSKIGGLGRLSRETVQNERFS-VLPCAWNMLLRRSPAMMASLEAHNPWMTHEFN----PRPKKYVAWHIRTSHGETNGSFTPHVHTYIFHRQSSTSVLPIFLSATDAAERMCPRFFDQDVPITPVYISSNSKTMARNCTVLAATLAAEHKVGPGFVDLGIDDVDAHTTFSKNPKATALNAFIDYLYLMDSSIIVQTGSSFSFTVASIKGMSCHGVAKPEGLPVKNLNVCLP 369          
BLAST of mRNA_P-canaliculata_contig10110.198.1 vs. uniprot
Match: A0A6H5JS37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS37_9PHAE)

HSP 1 Score: 231 bits (589), Expect = 3.120e-67
Identity = 138/362 (38.12%), Postives = 209/362 (57.73%), Query Frame = 0
Query:    2 SWPSTQLQAMTNGTYFVYKLFNSVGNLFLALNRMLPVLRFLEMGIVLDSQKSFPGFRQAFEPGVIMWEIDLAPLKQRALEIEQGGNINGFHALTLVDGLIVLSDAQLELIISTMGISASSLSELVSIALRPERHPRLRSLFSKIHSSIGGQRRARP--EPCTWNMFLRRSPFLLESLELHSPWLSRNGGLVPERRPAKYVGWHIRTPGGESNASYVPAVHRYIIQE-SPEVVCPAFESATQVARTSCQEFATHD---MAVYISSNSKSLARSCIEALAEHETQGGQVDLGLGPQDAHTRFSLNPN-ASMNAFLDYVFLLDATAIIRSGSSFSGTIVTMRGFVCQPTRVT-ELPERQLLACAP 355
            +WP+ Q  A+ NGT  V+ L + VGN F+ L  ++ V R+LE+G+V++  K F GFR AF+ G + W+ID  P ++RA EI +G N +GFH     DG +VL D QL ++ S +GI+     + + + L+     ++R   S      GG +   P  +PCTWNMF+RRS  ++  LE ++PW      +    R  KY+ + IRT  GE+  S+ P +H YI       VVC  + +AT+ A+ +C      D   + ++ISSNS S+AR+C    A  +   G VD+G+   DAHT FS +P  A++ AF+D++F+LDA  ++R+ SSFSGT V M+G  C   +V+ E+P   L  C P
Sbjct:  229 TWPAMQESAIANGTVVVFDLVSRVGNAFMDLRNIIQVARWLELGLVIN-WKGFQGFRDAFDTGELKWDIDTEPFRRRAKEISRGVNPSGFHLFRFYDGFMVLCDHQLTMLASKVGIAIQH-PDAMMLQLKKVFPVKIRYWIS------GGLQNGLPASQPCTWNMFVRRSAAMMRRLEAYNPWRVEGSSMS---RFQKYIAFQIRTTEGETAGSFDPKIHTYIFNNLRSTVVCNWYFAATEEAKGACPAAFNADEGDVPLFISSNSMSMARNCSAEAAGRKMLPGLVDVGVPVGDAHTTFSAHPKIAALKAFVDFLFILDAEVVVRTASSFSGTAVEMKGMNCFEAKVSVEMPISGLYVCVP 579          
BLAST of mRNA_P-canaliculata_contig10110.198.1 vs. uniprot
Match: A0A6H5KDJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ4_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 1.250e-61
Identity = 119/318 (37.42%), Postives = 181/318 (56.92%), Query Frame = 0
Query:   42 LEMGIVLDSQKSFPGFRQAFEPGVIMWEIDLAPLKQRALEIEQGGNINGFHALTLVDGLIVLSDAQLELIISTMGISASSLSELVSIALRPERHPRLRSLFSKIHSSIGGQRRARPEPCTWNMFLRRSPFLLESLELHSPWLSRNGGLVPERRPAKYVGWHIRTPGGESNASYVPAVHRYIIQE-SPEVVCPAFESATQVARTSC-QEFATHDMAVYISSNSKSLARSCIEALAEHETQGGQVDLGLGPQDAHTRFSLNPNASMNAFLDYVFLLDATAIIRSGSSFSGTIVTMRGFVCQPTRVTELP--ERQLLACAP 355
            LE+ ++++  + FP FR AFEP VI W++D  P K R  EI +G +    HAL  +DG +++SD QLE++ ++ G+ + + S  +    R     R R   +  +  +         PC WNM LRRSP ++ S+E H+PW++   G  P R  A Y  WHIRT  GE+  S+  +  RYI    + + +CP F S  + +  +C   F+ +D  VYISSNSKS AR+C     + + +   VDLG+  QDAHT FS NP+  +NAF+D+++L+DA  I+R+ SSFSG I+ ++ + C    + +LP     L  C P
Sbjct:    2 LEVALIINLDQ-FPAFRVAFEPEVIKWDLDTEPFKLRGGEISKGVDAEDRHALQFLDGFLIVSDHQLEVMSASFGVGSGTHSG-IKAGFRKAFKNRWRHYLATANLDLA-------PPCAWNMVLRRSPTMMNSMEAHTPWVT--AGDSP-RAHAHYHAWHIRTSEGETERSF--SKQRYIFNNVASQSICPMFVSTREASEEACPSRFSGNDSPVYISSNSKSTARNCSAEARKKDIETAFVDLGINAQDAHTAFSKNPDTVVNAFIDFLYLMDADIIVRTASSFSGAIIDIKSYRCMDAYLGKLPVFRMHLFVCVP 305          
BLAST of mRNA_P-canaliculata_contig10110.198.1 vs. uniprot
Match: A0A6H5JUR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUR5_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 3.250e-46
Identity = 89/207 (43.00%), Postives = 131/207 (63.29%), Query Frame = 0
Query:  158 EPCTWNMFLRRSPFLLESLELHSPWLSRNGGLVPERRPAKYVGWHIRTPGGESNASYVPAVHRYIIQ-ESPEVVCPAFESATQVARTSCQEFATHD----MAVYISSNSKSLARSCIEALAEHETQGGQVDLGLGPQDAHTRFSLNPNAS-MNAFLDYVFLLDATAIIRSGSSFSGTIVTMRGFVCQPTRVTE-LPERQLLACAPKN 357
            + C WNM LRRS  ++ SL+ ++PW     G     RPA+YV WHIRT  GE+  S+ P VH+YI   ++   V P F SAT  A  +C +   HD    M VYISSNSK+++R+C    AE++ Q G VDLG+   DAHT +S NP+A+ +NAF+DY++L+D++ I+++GSSF+ T+ +++G  C+    T+  P R L  C P +
Sbjct:   17 QACAWNMLLRRSHSIMASLDANNPWTPAGFG----SRPAEYVAWHIRTSNGETKESFSPDVHQYIFNGQTSAAVFPLFLSATSFAEKACPKL-YHDNIPIMPVYISSNSKTMSRNCTALAAENKIQSGFVDLGIADSDAHTGYSANPDATALNAFIDYLYLMDSSIIVQTGSSFAFTVASIKGTSCRGAPKTKGAPVRSLYICLPND 218          
BLAST of mRNA_P-canaliculata_contig10110.198.1 vs. uniprot
Match: D8LBV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBV4_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 6.200e-40
Identity = 103/276 (37.32%), Postives = 153/276 (55.43%), Query Frame = 0
Query:    2 SWPSTQLQAMTNGTYFVYKLFNSVGNLFLALNRMLPVLRFLEMGIVLDSQKSFPGFRQAFEPGVIMWEIDLAPLKQRALEIEQGGNINGFHALTLVDGLIVLSDAQLELIISTMGISASSLSELVSIALRPERHPRLRSLFS-KIHSSIGGQRR---ARPEPCTWNMFLRRSPFLLESLELHSPWLSRNGGLVPERRPAKYVGWHIRTPGGESNASYVPAVHRYIIQE-SPEVVCPAFESATQVARTSCQEFATHD---MAVYISSNSKSLAR-SC 268
            +WP+ Q  A+ NGT  V+ L + VGN F+ L  ++ V R+LE+G+V++  K F GFR AF+ G + W+ID  P ++RA  I +G N +GFH     DG +VL D QL ++ S MGI+      +V          +L+ +F  KI   I G+ +      +PCTWNMF++RS  ++ SLE+++PW      +    R  KYV + IRT  GE+  S+ P +H YI       VVC  + +AT+ A+  C      D   + ++ISSNS  L R SC
Sbjct:  229 TWPAMQESAIANGTVVVFDLVSRVGNAFMDLRNIIQVARWLELGLVVN-WKGFQGFRDAFDTGELKWDIDTEPFRRRAKAISRGVNPSGFHLFWFYDGFMVLCDHQLTMLASKMGIAIQHPDAMVL---------QLKKVFPVKIRYWISGRLQNGLPASQPCTWNMFVKRSASMMRSLEVYNPWRVEGSSMS---RFQKYVAFQIRTTEGETAGSFDPKIHTYIFNNLRSTVVCNWYFTATEEAKGVCPAAFNADEGDVPLFISSNSIVLLRHSC 491          
BLAST of mRNA_P-canaliculata_contig10110.198.1 vs. uniprot
Match: A0A6H5JBZ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBZ2_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 1.770e-20
Identity = 47/102 (46.08%), Postives = 68/102 (66.67%), Query Frame = 0
Query:  256 YISSNSKSLARSCIEALAEHETQGGQVDLGLGPQDAHTRFSLNPNAS-MNAFLDYVFLLDATAIIRSGSSFSGTIVTMRGFVCQPTR-VTELPERQLLACAP 355
            +  S SKS+AR+C    AEH+   G VDLG+   DAHT FS NPNA+ +NAF+DY++L+D++ II++GSSFS T+  ++   C+      ELP ++L  C P
Sbjct:    5 FFRSRSKSMARNCTALAAEHDVTAGFVDLGIDDLDAHTTFSKNPNATALNAFIDYLYLMDSSVIIQTGSSFSSTVARVKSLKCREVEHPPELPVKRLNVCLP 106          
BLAST of mRNA_P-canaliculata_contig10110.198.1 vs. uniprot
Match: D7G5J4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5J4_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 5.560e-14
Identity = 45/104 (43.27%), Postives = 60/104 (57.69%), Query Frame = 0
Query:  159 PCTWNMFLRRSPFLLESLELHSPWLSRNGGLVPERRPAKYVGWHIRTPGGESNASYVPAVHRYIIQE-SPEVVCPAFESATQVARTSC-QEFATHDMAVYISSN 260
            PC WNM LRRSP ++ S+E H+PW++   G  P  R A Y  WHIRT  GE+  S+  +  RYI    + E +CP F S  + +  +C   F+  D  VYISSN
Sbjct:   41 PCAWNMVLRRSPTMMNSMEAHTPWVTV--GDSPRTR-AHYHAWHIRTSEGETERSF--SKQRYIFNNVASESICPMFVSTREASEEACPSRFSGKDSPVYISSN 139          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10110.198.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5JA60_9PHAE2.730e-8143.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L1Z7_9PHAE6.930e-7840.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JS37_9PHAE3.120e-6738.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDJ4_9PHAE1.250e-6137.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUR5_9PHAE3.250e-4643.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBV4_ECTSI6.200e-4037.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBZ2_9PHAE1.770e-2046.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5J4_ECTSI5.560e-1443.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10110contigP-canaliculata_contig10110:6057..8883 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10110.198.1mRNA_P-canaliculata_contig10110.198.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10110 5647..8934 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10110.198.1 ID=prot_P-canaliculata_contig10110.198.1|Name=mRNA_P-canaliculata_contig10110.198.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=361bp
MSWPSTQLQAMTNGTYFVYKLFNSVGNLFLALNRMLPVLRFLEMGIVLDS
QKSFPGFRQAFEPGVIMWEIDLAPLKQRALEIEQGGNINGFHALTLVDGL
IVLSDAQLELIISTMGISASSLSELVSIALRPERHPRLRSLFSKIHSSIG
GQRRARPEPCTWNMFLRRSPFLLESLELHSPWLSRNGGLVPERRPAKYVG
WHIRTPGGESNASYVPAVHRYIIQESPEVVCPAFESATQVARTSCQEFAT
HDMAVYISSNSKSLARSCIEALAEHETQGGQVDLGLGPQDAHTRFSLNPN
ASMNAFLDYVFLLDATAIIRSGSSFSGTIVTMRGFVCQPTRVTELPERQL
LACAPKNSSC*
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