prot_P-canaliculata_contig10097.183.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10097.183.1
Unique Nameprot_P-canaliculata_contig10097.183.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length513
Homology
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BLAST of mRNA_P-canaliculata_contig10097.183.1 vs. uniprot
Match: A0A078A856_STYLE (Uncharacterized protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078A856_STYLE)

HSP 1 Score: 56.6 bits (135), Expect = 8.660e-5
Identity = 25/46 (54.35%), Postives = 34/46 (73.91%), Query Frame = 0 
Query:  167 GRPVFHTYGGGNTSPAVGGVVYGSYMLSHSITPQVFPNRPRTRQVY 212
            G+P FH YG GNT+PAVGG VYG YML+H++ P+   + P+ +Q Y
Sbjct:  318 GKPAFHLYGKGNTNPAVGGNVYGQYMLTHNVNPESGEHLPKYQQTY 363
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10097.183.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A078A856_STYLE8.660e-554.35Uncharacterized protein n=1 Tax=Stylonychia lemnae... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10097contigP-canaliculata_contig10097:7331..10027 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10097.183.1mRNA_P-canaliculata_contig10097.183.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10097 6387..10371 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10097.183.1 ID=prot_P-canaliculata_contig10097.183.1|Name=mRNA_P-canaliculata_contig10097.183.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=513bp
MSSPEKREARVQRLLQSTGPAWGGTETRSAYVYPRSICPLRRIAGISLGV
EVGDERYEGREQPTGYDLTQLLDEIFPREDAPSNSITVDIGENIAAGQDQ
VAKSKEEATKDSKIKIERYAPTGVSIAGDAESDDGEGEPRVASDERPRHP
KRDLRASAGGSRNGPPGRPVFHTYGGGNTSPAVGGVVYGSYMLSHSITPQ
VFPNRPRTRQVYASTQRSAERAAARVRAGESRHRKYGTIDTLQNDTTGGG
TNSSARRGRVASKVPMTKRVTVPDGRGGNMETRSIVEGEDGISKAVRATR
EEKQSEEKCGTSKTLNNRVLLFRALPDSDGDRYYVESRHPSKARQSRHYS
KARPSSARTCPRESRDPVAEETNPPPGGATGSEQLYPTEEHERQPVDDAL
STSLDSRSDAMAQNGSHSVGHPSPAALHAWTADRRLMNDPRNYKFLPRGW
AGELITPAGLPGPEPSGVEAVFPLREEGLRKGRGGSRNSRNCLESGVGAC
LVWDPPDGPRSR*
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