prot_P-canaliculata_contig100951.181.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig100951.181.1
Unique Nameprot_P-canaliculata_contig100951.181.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length97
Homology
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BLAST of mRNA_P-canaliculata_contig100951.181.1 vs. uniprot
Match: D8LP08_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP08_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 2.250e-28
Identity = 63/96 (65.62%), Postives = 70/96 (72.92%), Query Frame = 0 
Query:    1 RYVVRSDRQTAATGVPATSSRPKLDGFTTEHLGDGCVAAFALTSALGQSEMMLTTAATAFVSVLERGGGPAEAVAMALLPAASFLPRAAGNLLLYS 96
            RYVVRSDR+ + +        P++DGFT  HLGDGCVAAFALTSALGQSE  LT AA  FV VL RGGG  EA+A  LLPAA FLPRAA +L LYS
Sbjct:  144 RYVVRSDREQSPSATTGEPPVPQMDGFTVGHLGDGCVAAFALTSALGQSEAPLTLAAGEFVRVLWRGGGILEALAAVLLPAAPFLPRAAADLFLYS 239
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BLAST of mRNA_P-canaliculata_contig100951.181.1 vs. uniprot
Match: A0A6H5KWW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWW8_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 6.330e-28
Identity = 63/97 (64.95%), Postives = 71/97 (73.20%), Query Frame = 0 
Query:    1 RYVVRSDRQTAATGVPATSSRPKLDGFTTEHLGDGCVAAFALTSALGQSEMMLTTAATAFVSVLERGGGPAEAVAMALLPAASFLPRAAGNLLLYSA 97
            RYVVRSDR+ + +        P++DGFT  HLGDGCVAAFALTSALGQSE  LT AA  FV VL RGGG  EA+A  LLPAA FLPRAA +L LY+A
Sbjct:  236 RYVVRSDREQSPSATTGEPPVPQMDGFTVGHLGDGCVAAFALTSALGQSEAPLTLAAGEFVGVLGRGGGILEALAAVLLPAAPFLPRAAADLFLYTA 332
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100951.181.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LP08_ECTSI2.250e-2865.63Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KWW8_9PHAE6.330e-2864.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig100951contigP-canaliculata_contig100951:422..712 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig100951.181.1mRNA_P-canaliculata_contig100951.181.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig100951 422..712 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig100951.181.1 ID=prot_P-canaliculata_contig100951.181.1|Name=mRNA_P-canaliculata_contig100951.181.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=97bp
RYVVRSDRQTAATGVPATSSRPKLDGFTTEHLGDGCVAAFALTSALGQSE
MMLTTAATAFVSVLERGGGPAEAVAMALLPAASFLPRAAGNLLLYSA
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