prot_P-canaliculata_contig100904.171.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig100904.171.1
Unique Nameprot_P-canaliculata_contig100904.171.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length315
Homology
BLAST of mRNA_P-canaliculata_contig100904.171.1 vs. uniprot
Match: A0A2E8K2I6_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8K2I6_9PLAN)

HSP 1 Score: 72.0 bits (175), Expect = 2.850e-10
Identity = 49/122 (40.16%), Postives = 68/122 (55.74%), Query Frame = 0
Query:   96 VAWHLGDAIEDALHGAVWLAALSAGAAWLHLGVLAPARQWAAAVLLGVTALWALDAAQQVWIEYPQNVAFFAEHQTELLTSRGIEPGSGMAELFARRLTFNDATGPVGFSNVFASLAGAAGV 217
            V  H  + + D   GA WLAA+  G A  HL   +  R+   +++LG  A+  +    QV+ E+   VAFF  ++  +L SRG   GS  A  F RRL   +ATG +GFSNVF+ L+GAA V
Sbjct:   94 VVLHGTEGLLDGWRGADWLAAVMLGVALAHLVRKSVNRRIVISIMLGAIAVSGVRGFHQVFWEHADTVAFFESNRELVLGSRGWAEGSPAALAFERRLRQPEATGWIGFSNVFSGLSGAAAV 215          
BLAST of mRNA_P-canaliculata_contig100904.171.1 vs. uniprot
Match: A0A2E3Q617_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E3Q617_9BACT)

HSP 1 Score: 71.6 bits (174), Expect = 3.820e-10
Identity = 47/119 (39.50%), Postives = 66/119 (55.46%), Query Frame = 0
Query:   99 HLGDAIEDALHGAVWLAALSAGAAWLHLGVLAPARQWAAAVLLGVTALWALDAAQQVWIEYPQNVAFFAEHQTELLTSRGIEPGSGMAELFARRLTFNDATGPVGFSNVFASLAGAAGV 217
            H    + D   G+ W AA+  GAA  HL  L   R+   ++LL   A+  +    QV+ E+   VA+F  ++ ++L SRG   GS  A  F RRL   +ATG +GFSNVF+ L+GAA V
Sbjct:   97 HGAGDLLDGWRGSDWFAAVVLGAALAHLVRLPGNRRMVLSILLAAVAVGGVRGFHQVFWEHADTVAYFEANRDQVLASRGWAEGSPAALAFERRLRQPEATGWIGFSNVFSGLSGAAAV 215          
BLAST of mRNA_P-canaliculata_contig100904.171.1 vs. uniprot
Match: A0A3L7TI01_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7TI01_9BACT)

HSP 1 Score: 65.5 bits (158), Expect = 4.100e-8
Identity = 84/253 (33.20%), Postives = 116/253 (45.85%), Query Frame = 0
Query:   22 LVPLISQVAFDVDPRMALTLNAATDGATGLTAAALVWWAAGLTAVSAGGLAVA--LLAGVRLRIGLLLLAAAGAAGVAWHLGDAIEDALHGAVWLAALSAGAAWLHLGVLAPARQWAAAVLLGVTALWALDAAQQVWIEYPQNVAFFAEHQTELLTSRGIEPGSGMAELFARRLTFNDATGPVGFSNVFASLAGAAG-VLAAVXXAAWLRQRRGAAAXXXXXXXXXXXLVVTLTHSKGAPGALAVTAAAALAL 271
            L+P+  Q+ FDVDP     L+A    A G T + ++     +  + A  LA+A    AG+ +   ++LLA A    +A+   ++I DA  G  WLAA  A  A  HL      R  A A+++ +TA +AL    QV  E+   VA F E +      RG    S  A  + RRL   +ATG  GFSNVF++  G    VL A    +W R +                L+V      G  GAL  TA AAL L
Sbjct:   28 LLPIQPQLWFDVDPA----LDAMPMLAMGPTGSHVL----DVLLILAATLAIAGEHRAGLGVHWSMVLLALAPLPALAYWGQNSI-DAFRGDTWLAAALAFVALAHLVRERSLRVMAIAIVVALTAAFALRGIVQVTTEHDATVALFRETRATFFAERGWSADSSAARTYERRLMQAEATGWFGFSNVFSTFMGVGALVLGATAVMSWRRVKSTLTMSLTIAALACAALLVI----NGGKGALGATALAALLL 267          
BLAST of mRNA_P-canaliculata_contig100904.171.1 vs. uniprot
Match: A0A424KKF0_9BACT (O-antigen ligase domain-containing protein n=1 Tax=Phycisphaera sp. TMED9 TaxID=1986611 RepID=A0A424KKF0_9BACT)

HSP 1 Score: 62.4 bits (150), Expect = 4.180e-7
Identity = 52/150 (34.67%), Postives = 73/150 (48.67%), Query Frame = 0
Query:  113 WLAALSAGAAWLHLGVLAPARQWAAAVLLGVTALWALDAAQQVWIEYPQNVAFFAEHQTELLTSRGIEPGSGMAELFARRLTFNDATGPVGFSNVFASLAGAAGVLAAVXXAAWLRQRRGAAAXXXXXXXXXXXLVVTLTHSKGAPGALA 262
            W AA + G A  HL      R    A+LLG   + A     QV +E+   VAFF  ++ ++L +RG    S  A  F RRL   +ATG +GFSN+F+  A AAG +  V  A  + +RRG  A           ++  L    G+ GA+A
Sbjct:  125 WFAAATTGVALAHLVADRRVRVVVLAMLLGGIVVMACRGVHQVVVEHADTVAFFDANRADILATRGWLEESPAALAFERRLRQPEATGWIGFSNIFSGFA-AAGCIGLVG-ALVVSRRRGHEAGGPVLLGLAAVMLAVLVGVNGSKGAIA 272          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100904.171.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2E8K2I6_9PLAN2.850e-1040.16Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A2E3Q617_9BACT3.820e-1039.50Uncharacterized protein n=1 Tax=Phycisphaerae bact... [more]
A0A3L7TI01_9BACT4.100e-833.20Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A424KKF0_9BACT4.180e-734.67O-antigen ligase domain-containing protein n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 228..233
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..76
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 135..156
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 129..134
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 234..251
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 252..256
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 102..106
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..101
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 107..128
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 286..307
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 77..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 257..274
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 157..206
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 275..285
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 308..315
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 207..227
NoneNo IPR availableTMHMMTMhelixcoord: 233..252
NoneNo IPR availableTMHMMTMhelixcoord: 285..307
NoneNo IPR availableTMHMMTMhelixcoord: 55..77
NoneNo IPR availableTMHMMTMhelixcoord: 204..226
NoneNo IPR availableTMHMMTMhelixcoord: 135..157
NoneNo IPR availableTMHMMTMhelixcoord: 84..101
NoneNo IPR availableTMHMMTMhelixcoord: 256..278
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableTMHMMTMhelixcoord: 111..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig100904contigP-canaliculata_contig100904:64..1008 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig100904.171.1mRNA_P-canaliculata_contig100904.171.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig100904 64..1008 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig100904.171.1 ID=prot_P-canaliculata_contig100904.171.1|Name=mRNA_P-canaliculata_contig100904.171.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=315bp
WAPALVPYLAAALMALTLVPCLVPLISQVAFDVDPRMALTLNAATDGATG
LTAAALVWWAAGLTAVSAGGLAVALLAGVRLRIGLLLLAAAGAAGVAWHL
GDAIEDALHGAVWLAALSAGAAWLHLGVLAPARQWAAAVLLGVTALWALD
AAQQVWIEYPQNVAFFAEHQTELLTSRGIEPGSGMAELFARRLTFNDATG
PVGFSNVFASLAGAAGVLAAVAGAAWLRQRRGAAAGAAALSALAAVLVVT
LTHSKGAPGALAVTAAAALALGAARRWGGRAAPALARAAGPLAVIAVLIV
IALRLAAGAPPPPAG
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