prot_P-canaliculata_contig100901.170.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig100901.170.1
Unique Nameprot_P-canaliculata_contig100901.170.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length48
Homology
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BLAST of mRNA_P-canaliculata_contig100901.170.1 vs. uniprot
Match: A6VRX4_MARMS (Uncharacterized protein n=6 Tax=Marinomonas TaxID=28253 RepID=A6VRX4_MARMS)

HSP 1 Score: 61.6 bits (148), Expect = 5.910e-10
Identity = 27/48 (56.25%), Postives = 34/48 (70.83%), Query Frame = 0 
Query:    1 MKLLPARPSLEYLYREARAIKSRHRRADTSVCSVIGHFDTSLHGLSPE 48
            MK+LP  PS+EYL+R ARA++S+HR  D SV  +I HFDTS   L  E
Sbjct:    1 MKILPNNPSIEYLHRAARALRSKHRAGDPSVVELISHFDTSFQNLQTE 48
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100901.170.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A6VRX4_MARMS5.910e-1056.25Uncharacterized protein n=6 Tax=Marinomonas TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig100901contigP-canaliculata_contig100901:874..1017 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig100901.170.1mRNA_P-canaliculata_contig100901.170.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig100901 874..1017 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig100901.170.1 ID=prot_P-canaliculata_contig100901.170.1|Name=mRNA_P-canaliculata_contig100901.170.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=48bp
MKLLPARPSLEYLYREARAIKSRHRRADTSVCSVIGHFDTSLHGLSPE
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