prot_P-canaliculata_contig1009.169.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig1009.169.1
Unique Nameprot_P-canaliculata_contig1009.169.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length127
Homology
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BLAST of mRNA_P-canaliculata_contig1009.169.1 vs. uniprot
Match: D7G0G0_ECTSI (ILEI domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0G0_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 5.020e-16
Identity = 49/99 (49.49%), Postives = 63/99 (63.64%), Query Frame = 0 
Query:   28 MGNVFEHESRPVGEGRHVSFVDADVLEDDLKWLALKGSMLFDDDFLEEEYANLPQYDGTELPQELGNEPERGESSQQFSAWKTGREGGDHFVRRMLQIV 126
            MGNV EH          V+  DADV+E+DLKWL++KGSMLF+DDFLEEEY +LP Y+GTE+    GN+   G S++       G   G   VRRMLQ++
Sbjct:    1 MGNVLEHAGS-------VAIDDADVVEEDLKWLSVKGSMLFNDDFLEEEYTSLPPYEGTEMLPVQGNDGSPGLSAEADVG--VGGLHGQDAVRRMLQLL 90
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig1009.169.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0G0_ECTSI5.020e-1649.49ILEI domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig1009contigP-canaliculata_contig1009:21551..27223 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig1009.169.1mRNA_P-canaliculata_contig1009.169.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig1009 21549..27223 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig1009.169.1 ID=prot_P-canaliculata_contig1009.169.1|Name=mRNA_P-canaliculata_contig1009.169.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=127bp
LPREECVGAYSQLDNTLKRGCLQVLIAMGNVFEHESRPVGEGRHVSFVDA
DVLEDDLKWLALKGSMLFDDDFLEEEYANLPQYDGTELPQELGNEPERGE
SSQQFSAWKTGREGGDHFVRRMLQIVV
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