prot_P-canaliculata_contig1009.168.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig1009.168.1
Unique Nameprot_P-canaliculata_contig1009.168.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length225
Homology
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BLAST of mRNA_P-canaliculata_contig1009.168.1 vs. uniprot
Match: D7G0G0_ECTSI (ILEI domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0G0_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 7.240e-22
Identity = 61/121 (50.41%), Postives = 68/121 (56.20%), Query Frame = 0 
Query:    1 KVSIPRAYAWTASFAARLETASGPKFDAGMADGGTRGGDPSGG---------------------GCSNPATDGVYVYVWDACGMRVHKIGTGFHGTLPGNVYCSSGKIVDSIRDYKGMTPA 100
            KVSIP+   WTASF ARL+T +           GT G  PS                        C NPATDGVYVYVWDA   RVHK+GTGFHGTL GNVY SS K++D IR +KGM PA
Sbjct:  329 KVSIPKPGTWTASFPARLDTEAE----------GTSGSTPSSARRXXXXXXXXXXXXXXXXXXXXCCNPATDGVYVYVWDADTKRVHKVGTGFHGTLAGNVYLSSKKVLDDIRVFKGMEPA 439
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BLAST of mRNA_P-canaliculata_contig1009.168.1 vs. uniprot
Match: A0A6H5K114_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K114_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 7.290e-22
Identity = 61/121 (50.41%), Postives = 68/121 (56.20%), Query Frame = 0 
Query:    1 KVSIPRAYAWTASFAARLETASGPKFDAGMADGGTRGGDPSGG---------------------GCSNPATDGVYVYVWDACGMRVHKIGTGFHGTLPGNVYCSSGKIVDSIRDYKGMTPA 100
            KVSIP+   WTASF ARL+T +           GT G  PS                        C NPATDGVYVYVWDA   RVHK+GTGFHGTL GNVY SS K++D IR +KGM PA
Sbjct:  280 KVSIPKPGTWTASFPARLDTEAE----------GTSGSTPSSARRGXXXXXXXXXXXXXXXXXXXCCNPATDGVYVYVWDADTKRVHKVGTGFHGTLAGNVYMSSKKVLDDIRVFKGMEPA 390
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig1009.168.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0G0_ECTSI7.240e-2250.41ILEI domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5K114_9PHAE7.290e-2250.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig1009contigP-canaliculata_contig1009:15466..18487 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig1009.168.1mRNA_P-canaliculata_contig1009.168.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig1009 15465..18487 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig1009.168.1 ID=prot_P-canaliculata_contig1009.168.1|Name=mRNA_P-canaliculata_contig1009.168.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=225bp
KVSIPRAYAWTASFAARLETASGPKFDAGMADGGTRGGDPSGGGCSNPAT
DGVYVYVWDACGMRVHKIGTGFHGTLPGNVYCSSGKIVDSIRDYKGMTPA
SESRHGPQEGGSEAVEPTRRRATGFAGLDVEGGADGAGDGTSDEDEKYNE
GSSGDDDSKEDDDNEEEDDNDDDDGDDAGNTEGVMDATASAANSDEQGGV
RPAQGSSSPSWLSDPSYGAPPAEST
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