prot_P-canaliculata_contig100801.157.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig100801.157.1
Unique Nameprot_P-canaliculata_contig100801.157.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length205
Homology
BLAST of mRNA_P-canaliculata_contig100801.157.1 vs. uniprot
Match: A0A518DCV8_9BACT (SASA domain-containing protein n=1 Tax=Pirellulimonas nuda TaxID=2528009 RepID=A0A518DCV8_9BACT)

HSP 1 Score: 108 bits (270), Expect = 5.660e-24
Identity = 64/176 (36.36%), Postives = 94/176 (53.41%), Query Frame = 0
Query:   25 PILIKNHSFEVDGGADGEFSVGDVTGWVKSGRSTGWLNVSTEFYSNTDVVDTSPSGGTYADMDGKRVFFFAANGNRFITQTLESNIKVGQQYRLTIAVGNRDASTRQGFAGYDIRLSAGGTVVATETSTVPPGSGTFTDVELVYTARAGDSGELGIFIGTLNASSSSALEVDNVRL 200
            P+ I N SFE    +D   +   V+GW+KSG   G  N     Y +   +D +  GG    M+G          +  + QTL + ++ G  Y+LT+A+G+RDA    GFAG  I L AGG V+    +      GTFTDV + YTA AGD+G LG+ +  L+ +  ++++ DNVRL
Sbjct:  254 PLQITNPSFETPARSDDAVNPAIVSGWIKSGGVIGTFNPGGGAYLDASALDAN--GGVVGAMEGTHALSMTG-ADASVEQTLSAAVRAGTTYKLTVAIGDRDAGGSPGFAGARIELLAGGQVLTDSGAITGLADGTFTDVSISYTAGAGDAGALGVRLVALDGAGGTSVDFDNVRL 426          
BLAST of mRNA_P-canaliculata_contig100801.157.1 vs. uniprot
Match: UPI000786128F (tandem-95 repeat protein n=1 Tax=Endozoicomonas arenosclerae TaxID=1633495 RepID=UPI000786128F)

HSP 1 Score: 56.6 bits (135), Expect = 7.790e-6
Identity = 58/183 (31.69%), Postives = 85/183 (46.45%), Query Frame = 0
Query:   26 ILIKNHSFEVDG-GADGEFSVGDVTG-WVKSGRSTGWLNVSTEFYSNTDVVDTSPSG--GTYADMDGKRVFFFAANGNRFITQTLESNIKVGQQYRLTIAVGNRDASTRQGFAGYDIRLSAGGTVVATETSTVPPGSGTFTDVELVYT--ARAGDSGELGI-FIGTLNASSSSALEVDNVRLT 201
            ++I +HSFE      DG F     +  W  SG + G  N     Y+N  + + +  G    + + DG             I+QTL  N      Y+L + +GNR   + +GFA Y++R+ AGG V+A++ S V P  G F  + L     A A DS  +G   +  L+  S   L  DNVRLT
Sbjct: 5228 VVINDHSFESQSLTTDGAFVHQPTSSSWTFSGANDGIHN-----YNNNGLNEPATKGINAGFLNTDGT------------ISQTLVENFDRSISYQLQVDIGNR---SNEGFADYEVRIKAGGVVLASDGS-VTPAEGEFDTLTLNLNGAAIAADSAAIGQPLVIELHKISGPQLVFDNVRLT 5389          
BLAST of mRNA_P-canaliculata_contig100801.157.1 vs. uniprot
Match: A0A081KG95_9GAMM (Uncharacterized protein n=1 Tax=Endozoicomonas elysicola TaxID=305900 RepID=A0A081KG95_9GAMM)

HSP 1 Score: 55.5 bits (132), Expect = 1.920e-5
Identity = 40/136 (29.41%), Postives = 64/136 (47.06%), Query Frame = 0
Query:   21 STASPILIKNHSFEVDGGADGEFSVGDVTG-WVKSGRSTGWLNVSTEFYSNTDVVDTSPSGGTYADMDGKRVFFFAANGNRFITQTLESNIKVGQQYRLTIAVGNRDASTRQGFAGYDIRLSAGGTVVATETSTVP 155
            +T+  + I +HSFE     DGE  +      W  S   +G  N +     +  +   +P G             +A N N  ++QTL  +     QY+L + +GNR  S   GFA Y++R++AGG V+A++ S  P
Sbjct: 1511 ATSRNVTIADHSFESVTLIDGEPVLNPAASPWSFSSTHSGIWNPT-----SGQITQEAPDGNNIG---------YATNDNETLSQTLSESFSNDTQYQLQVEIGNR--SDTAGFANYEVRITAGGVVLASDGSVSP 1630          
BLAST of mRNA_P-canaliculata_contig100801.157.1 vs. uniprot
Match: A0A552KMW5_9CHRO (PEP-CTERM sorting domain-containing protein n=2 Tax=Microcystis TaxID=1125 RepID=A0A552KMW5_9CHRO)

HSP 1 Score: 53.9 bits (128), Expect = 2.700e-5
Identity = 60/184 (32.61%), Postives = 85/184 (46.20%), Query Frame = 0
Query:   10 AIALSTLLA---GVSTASPILIKNHSFEV----DGGADGEFSVGDVTGWVKSGRST-GWLNVSTEFYSNTDVVD-------TSPSGGTYADMDGKRVFFFAANGNRFITQTLESNIKVGQQYRLTIAVGNRDASTRQGFAGYDIRLSAGGTVVATETSTVPPGSGTFTDVELVYTARAGDSGEL 178
            AIA S L+    G   A+ I I NHSFE     D     +  +G    W  +G S  G++N         DV         T P+G   A  +G  +       ++ +T+TL++N K    Y L + VG+R       FAGY+I L AG TV+A+  S + P + TF  V + YT+  G SG L
Sbjct:   24 AIASSCLMIVPQGQVRAASIFIANHSFEAPIITDPSGILDTGIGTTGNWTFAGASARGFINPG---LGENDVPGFWYGPSPTLPNGNQVAWSNGGTI-------SQTLTETLQANTK----YTLGVYVGHRQ---NVAFAGYNIELLAGATVLASNNS-ITPAAETFAPVTVSYTS--GSSGSL 187          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100801.157.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A518DCV8_9BACT5.660e-2436.36SASA domain-containing protein n=1 Tax=Pirellulimo... [more]
UPI000786128F7.790e-631.69tandem-95 repeat protein n=1 Tax=Endozoicomonas ar... [more]
A0A081KG95_9GAMM1.920e-529.41Uncharacterized protein n=1 Tax=Endozoicomonas ely... [more]
A0A552KMW5_9CHRO2.700e-532.61PEP-CTERM sorting domain-containing protein n=2 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008979Galactose-binding-like domain superfamilyGENE3D2.60.120.260coord: 27..202
e-value: 1.3E-8
score: 37.4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..205
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig100801contigP-canaliculata_contig100801:37..651 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig100801.157.1mRNA_P-canaliculata_contig100801.157.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig100801 37..651 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig100801.157.1 ID=prot_P-canaliculata_contig100801.157.1|Name=mRNA_P-canaliculata_contig100801.157.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=205bp
MKINKKTFSAIALSTLLAGVSTASPILIKNHSFEVDGGADGEFSVGDVTG
WVKSGRSTGWLNVSTEFYSNTDVVDTSPSGGTYADMDGKRVFFFAANGNR
FITQTLESNIKVGQQYRLTIAVGNRDASTRQGFAGYDIRLSAGGTVVATE
TSTVPPGSGTFTDVELVYTARAGDSGELGIFIGTLNASSSSALEVDNVRL
TEDGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008979Galactose-bd-like_sf