prot_P-canaliculata_contig10062.138.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10062.138.1
Unique Nameprot_P-canaliculata_contig10062.138.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length187
Homology
[Close]
BLAST of mRNA_P-canaliculata_contig10062.138.1 vs. uniprot
Match: A0A397ACU4_9STRA (Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ACU4_9STRA)

HSP 1 Score: 120 bits (301), Expect = 8.120e-31
Identity = 67/103 (65.05%), Postives = 77/103 (74.76%), Query Frame = 0 
Query:    1 RQAQIVELGGLKLLLPLTQSKDVEVQRLAVHALANLSVNCEDTELLVECYNLSSVSIHLSYAANNQELMAKEGGIDMLIVMLASPHAHLQRQASKALANLGVN 103
            RQ QIVEL GLKLLLPLTQSKD EVQRLA HALANLSVNC     +    + ++  +H  Y A+NQ  MA EGGIDMLI +L S + H+QRQA+KALANLGVN
Sbjct:   62 RQVQIVELDGLKLLLPLTQSKDTEVQRLAAHALANLSVNCSSHNFI--WLHSTTPHLHDYYLADNQAKMANEGGIDMLIHLLQSTNEHVQRQAAKALANLGVN 162
[Close]
BLAST of mRNA_P-canaliculata_contig10062.138.1 vs. uniprot
Match: A0A418DV07_9STRA (Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418DV07_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.000e-30
Identity = 67/103 (65.05%), Postives = 77/103 (74.76%), Query Frame = 0 
Query:    1 RQAQIVELGGLKLLLPLTQSKDVEVQRLAVHALANLSVNCEDTELLVECYNLSSVSIHLSYAANNQELMAKEGGIDMLIVMLASPHAHLQRQASKALANLGVN 103
            RQ QIVEL GLKLLLPLTQSKD EVQRLA HALANLSVNC     +    + ++  +H  Y A+NQ  MA EGGIDMLI +L S + H+QRQA+KALANLGVN
Sbjct:   62 RQVQIVELDGLKLLLPLTQSKDTEVQRLAAHALANLSVNCSSHNFI--WLHSTTPHLHDYYLADNQAKMANEGGIDMLIHLLQSTNEHVQRQAAKALANLGVN 162
[Close]
BLAST of mRNA_P-canaliculata_contig10062.138.1 vs. uniprot
Match: A0A6A5AFC1_9STRA (Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AFC1_9STRA)

HSP 1 Score: 120 bits (301), Expect = 3.790e-30
Identity = 67/103 (65.05%), Postives = 77/103 (74.76%), Query Frame = 0 
Query:    1 RQAQIVELGGLKLLLPLTQSKDVEVQRLAVHALANLSVNCEDTELLVECYNLSSVSIHLSYAANNQELMAKEGGIDMLIVMLASPHAHLQRQASKALANLGVN 103
            RQ QIVEL GLKLLLPLTQSKD EVQRLA HALANLSVNC     +    + ++  +H  Y A+NQ  MA EGGIDMLI +L S + H+QRQA+KALANLGVN
Sbjct:   43 RQVQIVELDGLKLLLPLTQSKDTEVQRLAAHALANLSVNCSSHNFI--WLHSTTPHLHDYYLADNQAKMANEGGIDMLIHLLQSTNEHVQRQAAKALANLGVN 143
[Close]
BLAST of mRNA_P-canaliculata_contig10062.138.1 vs. uniprot
Match: A0A3R6WRV7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6WRV7_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 1.560e-20
Identity = 56/91 (61.54%), Postives = 67/91 (73.63%), Query Frame = 0 
Query:   13 LLLPLTQSKDVEVQRLAVHALANLSVNCEDTELLVECYNLSSVSIHLSYAANNQELMAKEGGIDMLIVMLASPHAHLQRQASKALANLGVN 103
            LLLPLT+SKD EVQRLA HALANLSVNC  +  LV         + + ++A+NQ  MA EGGIDMLI +L S + H+QRQA+KALANLGVN
Sbjct: 1316 LLLPLTESKDTEVQRLAAHALANLSVNCTCSAALV-------FVVTIFHSADNQTKMANEGGIDMLIHLLQSNNEHVQRQAAKALANLGVN 1399
[Close]
BLAST of mRNA_P-canaliculata_contig10062.138.1 vs. uniprot
Match: F0WLI4_9STRA (Vacuolar protein 8 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WLI4_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 5.180e-15
Identity = 52/103 (50.49%), Postives = 65/103 (63.11%), Query Frame = 0 
Query:    1 RQAQIVELGGLKLLLPLTQSKDVEVQRLAVHALANLSVNCEDTELLVECYNLSSVSIHLSYAANNQELMAKEGGIDMLIVMLASPHAHLQRQASKALANLGVN 103
            RQ QIVEL GL+LLLPLT                NLSVNC+  E +VE      + I+L   A+NQ+ MA EGGI+MLI +L S + H+QRQA+KA+ANL VN
Sbjct:   61 RQVQIVELCGLELLLPLTXXXXXXXXXXXXXXXXNLSVNCK-VEGVVEW-----LQINLYNVADNQQKMAGEGGIEMLIDLLGSSNEHVQRQAAKAIANLAVN 157
[Close]
BLAST of mRNA_P-canaliculata_contig10062.138.1 vs. uniprot
Match: A0A5D6Y1Z7_9STRA (Vacuolar protein 8 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1Z7_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 4.880e-11
Identity = 36/40 (90.00%), Postives = 36/40 (90.00%), Query Frame = 0 
Query:    1 RQAQIVELGGLKLLLPLTQSKDVEVQRLAVHALANLSVNC 40
            RQ QIVEL GLKLLLPLTQSKD EVQRLA HALANLSVNC
Sbjct:   63 RQVQIVELEGLKLLLPLTQSKDTEVQRLAAHALANLSVNC 102
[Close]
BLAST of mRNA_P-canaliculata_contig10062.138.1 vs. uniprot
Match: A0A7S1TZL3_9STRA (Vacuolar protein 8 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZL3_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 4.280e-8
Identity = 31/41 (75.61%), Postives = 36/41 (87.80%), Query Frame = 0 
Query:    2 QAQIVELGGLKLLLPLTQSKDVEVQRLAVHALANLSVNCED 42
            Q QIVELGGL+LLLPLT S+D +VQRL+ HALANLSVN E+
Sbjct:   26 QVQIVELGGLELLLPLTHSEDHDVQRLSAHALANLSVNAEN 66
[Close]
BLAST of mRNA_P-canaliculata_contig10062.138.1 vs. uniprot
Match: A0A7S2CFR3_9STRA (Vacuolar protein 8 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CFR3_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.370e-7
Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = 0 
Query:    1 RQAQIVELGGLKLLLPLTQSKDVEVQRLAVHALANLSVNCEDTELLVE 48
            RQ QIV+L GL+LLLPLT+S + EVQRLA HALANLSVN ++  L+ +
Sbjct:    6 RQVQIVKLDGLQLLLPLTRSVNKEVQRLAAHALANLSVNADNQMLMAD 53
[Close]
BLAST of mRNA_P-canaliculata_contig10062.138.1 vs. uniprot
Match: A0A662X7V9_9STRA (Vacuolar protein 8 n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X7V9_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.770e-7
Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = 0 
Query:    5 IVELGGLKLLLPLTQSKDVEVQRLAVHALANLSVNCEDTELLVE 48
            IVEL GL+LLLPLT+SKD EVQRLA HALANLSVN ++ E + +
Sbjct:  117 IVELDGLQLLLPLTKSKDTEVQRLAAHALANLSVNLDNKERIAK 160
[Close]
BLAST of mRNA_P-canaliculata_contig10062.138.1 vs. uniprot
Match: A0A812PGZ8_9DINO (Vacuolar protein 8 n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812PGZ8_9DINO)

HSP 1 Score: 57.0 bits (136), Expect = 2.200e-6
Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 0 
Query:    1 RQAQIVELGGLKLLLPLTQSKDVEVQRLAVHALANLSVN 39
            R+ QIV+LGGL+LLLPL +S D EVQRLA HALANLSV+
Sbjct:   70 RREQIVKLGGLELLLPLAESPDTEVQRLAAHALANLSVS 108
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10062.138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A397ACU4_9STRA8.120e-3165.05Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxI... [more]
A0A418DV07_9STRA1.000e-3065.05Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxI... [more]
A0A6A5AFC1_9STRA3.790e-3065.05Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxI... [more]
A0A3R6WRV7_9STRA1.560e-2061.54Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
F0WLI4_9STRA5.180e-1550.49Vacuolar protein 8 n=1 Tax=Albugo laibachii Nc14 T... [more]
A0A5D6Y1Z7_9STRA4.880e-1190.00Vacuolar protein 8 n=1 Tax=Pythium brassicum TaxID... [more]
A0A7S1TZL3_9STRA4.280e-875.61Vacuolar protein 8 n=1 Tax=Phaeomonas parva TaxID=... [more]
A0A7S2CFR3_9STRA1.370e-764.58Vacuolar protein 8 n=1 Tax=Florenciella parvula Ta... [more]
A0A662X7V9_9STRA1.770e-770.45Vacuolar protein 8 n=1 Tax=Nothophytophthora sp. C... [more]
A0A812PGZ8_9DINO2.200e-674.36Vacuolar protein 8 n=1 Tax=Symbiodinium sp. KB8 Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 1..38
e-value: 0.64
score: 19.1
coord: 103..143
e-value: 2.5E-4
score: 30.4
coord: 144..184
e-value: 0.011
score: 24.9
coord: 62..102
e-value: 2.6
score: 17.0
IPR000225ArmadilloPFAMPF00514Armcoord: 104..142
e-value: 1.1E-8
score: 34.9
coord: 65..100
e-value: 1.3E-5
score: 25.0
coord: 4..37
e-value: 1.1E-5
score: 25.3
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 9..47
score: 9.607
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 73..115
score: 12.127
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 114..156
score: 13.737
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 106..187
e-value: 3.2E-19
score: 71.5
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..52
e-value: 1.5E-6
score: 29.1
coord: 53..105
e-value: 3.1E-7
score: 31.3
NoneNo IPR availablePANTHERPTHR47249FAMILY NOT NAMEDcoord: 2..53
coord: 62..186
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 4..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10062contigP-canaliculata_contig10062:9659..10549 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10062.138.1mRNA_P-canaliculata_contig10062.138.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10062 9659..10549 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10062.138.1 ID=prot_P-canaliculata_contig10062.138.1|Name=mRNA_P-canaliculata_contig10062.138.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=187bp
RQAQIVELGGLKLLLPLTQSKDVEVQRLAVHALANLSVNCEDTELLVECY
NLSSVSIHLSYAANNQELMAKEGGIDMLIVMLASPHAHLQRQASKALANL
GVNTSNKERICKAGGVPPLVRLAGSKTAGVAVEAVAALANLAVNDETEIQ
IVREGGLIPILNGAGSRDAELQSQCARALRNLSVNRE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold