prot_P-canaliculata_contig10060.136.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10060.136.1
Unique Nameprot_P-canaliculata_contig10060.136.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length232
Homology
BLAST of mRNA_P-canaliculata_contig10060.136.1 vs. uniprot
Match: D7FP83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP83_ECTSI)

HSP 1 Score: 291 bits (744), Expect = 2.170e-96
Identity = 150/165 (90.91%), Postives = 156/165 (94.55%), Query Frame = 0
Query:    1 MFDPSVFDIKMVMGVLVVVALVAYAVFRLFVRRVVGEDDFFADLGISYKDFDMPDEVDDYYEAKENPAIAKDIPKLRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQMAETMISEEIESVQTEADEIESGWSQSIWPLAMQLRTLLVQRREQA 165
            MFDPSVFDI+MVMGVL  V+L+AYA+FRLFVR+VVGEDDFFADLGISYKDFDMPDEVDDYYEAKENP IA D  KLRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQ AETMISEEIESVQ EADEIE GWSQSIWPLAMQLRT+LVQRREQA
Sbjct:   34 MFDPSVFDIRMVMGVLACVSLLAYAIFRLFVRKVVGEDDFFADLGISYKDFDMPDEVDDYYEAKENPDIASDAGKLRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQEAETMISEEIESVQNEADEIEPGWSQSIWPLAMQLRTVLVQRREQA 198          
BLAST of mRNA_P-canaliculata_contig10060.136.1 vs. uniprot
Match: A0A835Z738_9STRA (Pre protein translocase subunit Sec66-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z738_9STRA)

HSP 1 Score: 201 bits (512), Expect = 2.300e-61
Identity = 100/164 (60.98%), Postives = 129/164 (78.66%), Query Frame = 0
Query:    2 FDPSVFDIKMVMGVLVVVALVAYAVFRLFVRRVVGEDDFFADLGISYKDFDMPDEVDDYYEAKENPAIAKDIPKLRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQMAETMISEEIESVQTEADEIESGWSQSIWPLAMQLRTLLVQRREQA 165
            FDPSVFD++MV+G L +  L++Y  +RL++ +VV  DDF ADLGISY DF++PDE+++YYEAKE  A   D   LRN LLKRAIADIPII+R+Q EGPG+ N+YQQAMIG++EW A+Q AE +I EEIE VQ EA+EIE GW Q IW +A +LR  L+QR++QA
Sbjct:   44 FDPSVFDMRMVLGALTLFGLLSYFAYRLYMNKVVAGDDFIADLGISYADFELPDEIEEYYEAKE--AAGDDATALRNPLLKRAIADIPIIMRLQKEGPGMQNLYQQAMIGDREWQAYQAAEALIGEEIEQVQAEAEEIEPGWGQQIWRMASELRQALLQRQQQA 205          
BLAST of mRNA_P-canaliculata_contig10060.136.1 vs. uniprot
Match: A0A1Z5KHC6_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KHC6_FISSO)

HSP 1 Score: 114 bits (285), Expect = 5.570e-27
Identity = 67/149 (44.97%), Postives = 88/149 (59.06%), Query Frame = 0
Query:   36 GEDDFFADLGISYKDFDMPDEVDDYYEAKENPAIA--------KDIPK----------LRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQMAETMISEEIESVQTEADEIESGWSQSIWPLAMQLRTLLVQRREQAE 166
             EDDFFA+L     +  +P EVD+YYE K     A        KD PK          L  AL+KRAIADIP++  +Q E  G+  +Y Q+M   K+W ++Q AE+++S+E+E V+ EADEIE GWSQSIW  AMQ   +L QR E  E
Sbjct:   76 SEDDFFAELDGDKFNLKLPSEVDEYYETKAKCEAAGWEPGQPIKD-PKDQQATQPQRLLAQALMKRAIADIPMVQHIQKESSGMNKLYSQSMCSVKQWRSYQQAESLVSQEVEEVRAEADEIEPGWSQSIWRQAMQYHQMLKQRHELEE 223          
BLAST of mRNA_P-canaliculata_contig10060.136.1 vs. uniprot
Match: A0A7S3L5D8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L5D8_9STRA)

HSP 1 Score: 114 bits (284), Expect = 7.490e-27
Identity = 62/143 (43.36%), Postives = 85/143 (59.44%), Query Frame = 0
Query:   38 DDFFADLGISYKDFDMPDEVDDYYEAKEN-----------PAIAKDIPK-----LRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQMAETMISEEIESVQTEADEIESGWSQSIWPLAMQLRTLLVQRREQ 164
            DDFFA L     +  +P EVD+YY+ KE            PA  ++        +  AL+KRAIADIPI+  +Q E PG+  +Y Q+M  EK+W A+Q AE ++S E++ V+ E+D+IE GWSQ IW  AMQ   +L QR EQ
Sbjct:   88 DDFFASLDTEKFNLKLPSEVDEYYKIKEKCESAGWEPGSKPATPQEAANGPHRVMAQALMKRAIADIPILQHIQKESPGMNKLYSQSMCSEKQWRAYQKAEALVSAEVDEVRRESDQIEPGWSQMIWRQAMQYHQMLKQRHEQ 230          
BLAST of mRNA_P-canaliculata_contig10060.136.1 vs. uniprot
Match: K0T2G4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T2G4_THAOC)

HSP 1 Score: 107 bits (266), Expect = 5.840e-24
Identity = 59/144 (40.97%), Postives = 84/144 (58.33%), Query Frame = 0
Query:   38 DDFFADLGISYKDFDMPDEVDDYYEAKEN---------PAIAKDIPK-----LRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQMAETMISEEIESVQTEADEIESGWSQSIWPLAMQLRTLLVQRREQAEA 167
            DDFF++L     +  +P  VD+YYE K             +A   P      L  AL+KR IADIPI+  +Q E  G+  +Y Q+M   K+W ++Q AE M+S E+E V+ EADEIE GWSQ++W  AMQ   ++ Q+ EQA++
Sbjct:   77 DDFFSNLDGDKFNIKLPSAVDEYYEVKAKCESDGWEPGQPMANGQPTNHHRLLAQALMKRCIADIPIVTHIQKESQGMNKLYSQSMCSVKQWKSYQAAEAMVSAEVEEVRAEADEIEPGWSQAVWRQAMQYHNMIKQKEEQAKS 220          
BLAST of mRNA_P-canaliculata_contig10060.136.1 vs. uniprot
Match: A0A7S2S0P4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S0P4_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.610e-23
Identity = 70/180 (38.89%), Postives = 99/180 (55.00%), Query Frame = 0
Query:    3 DPSVFDIKMVMGVLVVVALVAYAVFRLFVRRVVGEDD---FFADLGISYKDFDMPDEVDDYYEAKE--------------NPAIAKDIPK--LRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQMAETMISEEIESVQTEADEIESGWSQSIWPLAMQLRTLLVQRRE 163
            DP+++   +V+GVL +V +  +    L+ RR   +DD   FF+DL     + ++P  VD+YYE K+              N   A   P   L  AL+KR IADIP++  +Q E  G+  +Y Q+M   K+W  +Q AE M+S E+E V+ EADEIE GWSQ IW  AMQ   +L  R E
Sbjct:   48 DPAIY---LVLGVLAMVLIWYF----LYSRRSKKDDDDFAFFSDLDGEKFNLNLPAAVDEYYEVKDKCEDNGWEPGKPPTNQQEAASGPHRVLAQALMKRCIADIPLVTHIQKESAGMNKLYSQSMCSVKQWKTYQAAEAMVSAEVEEVRAEADEIEPGWSQVIWRQAMQYHNMLKNRHE 220          
BLAST of mRNA_P-canaliculata_contig10060.136.1 vs. uniprot
Match: A0A448YU82_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YU82_9STRA)

HSP 1 Score: 103 bits (257), Expect = 5.400e-23
Identity = 62/147 (42.18%), Postives = 84/147 (57.14%), Query Frame = 0
Query:   36 GEDDFFADLGISYKDFD--MPDEVDDYYEAKENPAIAKDIPK--------------LRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQMAETMISEEIESVQTEADEIESGWSQSIWPLAMQLRTLLVQRREQAE 166
             EDD+F+    SY+ F+  +P EVD+YY  KE    A   P               +  AL+KRAI DIPI+  +Q E  G+  +Y Q+M    +W A+Q AETM+S E++ V+ EADEIE GWSQ IW  AMQ   +L Q+ EQ +
Sbjct:   69 NEDDYFS----SYEKFNIKLPAEVDEYYSVKEKCMKAGWEPGKPPTDKNPNGPHRVMAQALMKRAIGDIPIVTFIQKESAGMNKLYSQSMCSVSQWRAYQNAETMVSTEVDEVRAEADEIEPGWSQVIWRQAMQYHGMLKQKHEQEQ 211          
BLAST of mRNA_P-canaliculata_contig10060.136.1 vs. uniprot
Match: B8C1S0_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1S0_THAPS)

HSP 1 Score: 103 bits (258), Expect = 5.850e-23
Identity = 68/179 (37.99%), Postives = 99/179 (55.31%), Query Frame = 0
Query:    3 DPSVFDIKMVMGVLVVVALVAYAVFRLFVRRVVGE-DDFFADLGISYKDFDMPDEVDDYYEAKEN-------PAIAKDIPK-------LRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQMAETMISEEIESVQTEADEIESGWSQSIWPLAMQLRTLLVQRREQAE 166
            DP++F +  V+   VV     + V R+  +R   + DDFF++L     +  +P  VD+YY+ K         P  A    +       L  AL+KR IADIPI+  +Q E  G+  +Y Q+M   K+W ++Q AE M+S E+E V+ EADE+E GWSQ IW  AMQ   +L Q+ EQA+
Sbjct:   56 DPALFLLLAVVAFAVV-----FIVLRIRRKRASADVDDFFSNLDGDKFNLRLPAAVDEYYDVKAKAEEEGWEPGQAAQGKQPSAQHRALAQALMKRCIADIPIVTFIQRESAGMNKLYSQSMCSVKQWKSYQAAEAMVSAEVEEVRAEADEVEPGWSQVIWRQAMQYHNMLKQKEEQAK 229          
BLAST of mRNA_P-canaliculata_contig10060.136.1 vs. uniprot
Match: A0A6U3U3N1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3U3N1_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.410e-22
Identity = 63/158 (39.87%), Postives = 85/158 (53.80%), Query Frame = 0
Query:   27 FRLFVRRVVGEDD---FFADLGISYKDFDMPDEVDDYYEAKENPAIAKDIPK------------------LRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQMAETMISEEIESVQTEADEIESGWSQSIWPLAMQLRTLLVQRRE 163
            F ++ RR   +DD   FF++L     +  +P  VD+YYE K     A   P                   L  AL+KR IADIPI+  +Q E PG+  +Y Q+M   K+W ++Q AE M+S E++ V+ EADEIE GWSQ IW  AMQ   +L QR E
Sbjct:   63 FFIWYRRKKAQDDSNNFFSELDGEKFNLKLPAAVDEYYEVKAKCEEAGWEPGQGAGQGAAAANANGPHRVLAQALMKRCIADIPIVTHIQKESPGMNKLYSQSMCSVKQWRSYQAAEAMVSAEVDEVRAEADEIEPGWSQVIWRQAMQYHNMLKQRHE 220          
BLAST of mRNA_P-canaliculata_contig10060.136.1 vs. uniprot
Match: B7FT11_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FT11_PHATC)

HSP 1 Score: 102 bits (255), Expect = 2.470e-22
Identity = 57/127 (44.88%), Postives = 75/127 (59.06%), Query Frame = 0
Query:   53 MPDEVDDYYEAKE--------------NPAIAKDIPK-LRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQMAETMISEEIESVQTEADEIESGWSQSIWPLAMQLRTLLVQRREQ 164
            +P EVD+YY  KE              NPA A    + L  AL+KRAIADIPI+  +Q E  G+  +Y Q+M    +W ++Q AE ++S E+E V+ EADEIE GWSQ IW  AMQ   +L Q+ EQ
Sbjct:  131 LPGEVDEYYAVKEKCESMGWEPGQTAQNPAQASPAHRALAQALMKRAIADIPIVTHIQKESSGMNKLYSQSMCSVNQWRSYQAAEQLVSTEVEEVRAEADEIEPGWSQVIWRQAMQYHQMLKQKHEQ 257          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10060.136.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP83_ECTSI2.170e-9690.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z738_9STRA2.300e-6160.98Pre protein translocase subunit Sec66-domain-conta... [more]
A0A1Z5KHC6_FISSO5.570e-2744.97Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S3L5D8_9STRA7.490e-2743.36Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
K0T2G4_THAOC5.840e-2440.97Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2S0P4_9STRA2.610e-2338.89Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A448YU82_9STRA5.400e-2342.18Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
B8C1S0_THAPS5.850e-2337.99Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A6U3U3N1_9STRA1.410e-2239.87Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
B7FT11_PHATC2.470e-2244.88Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 154..182
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..231
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 12..31
IPR018624Translocation protein Sec66PFAMPF09802Sec66coord: 66..174
e-value: 4.4E-16
score: 59.0
IPR018624Translocation protein Sec66PANTHERPTHR28229FAMILY NOT NAMEDcoord: 76..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10060contigP-canaliculata_contig10060:6618..10824 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10060.136.1mRNA_P-canaliculata_contig10060.136.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10060 5993..10827 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10060.136.1 ID=prot_P-canaliculata_contig10060.136.1|Name=mRNA_P-canaliculata_contig10060.136.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=232bp
MFDPSVFDIKMVMGVLVVVALVAYAVFRLFVRRVVGEDDFFADLGISYKD
FDMPDEVDDYYEAKENPAIAKDIPKLRNALLKRAIADIPIILRMQNEGPG
IYNMYQQAMIGEKEWHAFQMAETMISEEIESVQTEADEIESGWSQSIWPL
AMQLRTLLVQRREQAEAAAEKEQEAAASVKDSLPAATTTTSGKKAVPGKA
PAPAAAIEADKENEESGEKDDTGSVNVGSID*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018624Sec66