mRNA_P-canaliculata_contig1006.126.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig1006.126.1
Unique NamemRNA_P-canaliculata_contig1006.126.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig1006.126.1 vs. uniprot
Match: A0A6G1LIV7_9PEZI (Postreplication repair E3 ubiquitin-protein ligase RAD18 (Fragment) n=1 Tax=Teratosphaeria nubilosa TaxID=161662 RepID=A0A6G1LIV7_9PEZI)

HSP 1 Score: 392 bits (1008), Expect = 1.910e-133
Identity = 206/347 (59.37%), Postives = 255/347 (73.49%), Query Frame = 1
Query:    1 MDTDLSVPDSTDWLPTPLPSLSVLESALHCQICKEFYDTPMLTSCSHSFCSKCIRTSLSNDGKCPACRAADQTSKLRNNWALQEIVAAFRDARPKVLEMAR---DVQISEEKDKKRKRTIADSSERDMDPEDARRTRSKSRRLAASQFRPESVEIEDS--ANESDYQPEQEGQDGLVMCPMGCGKRMKIDAVDGHIDRCEDEKKNKQLGRPKSRAHLGDFPPPSNAAVRNPKPADRLPELSYSLLNETKLAKKLKELGIPSTGSKQLMIKRHREWVNLWNANCDSSNPRSKRDLLRELDAWERTQGGRAPLV-NGLASTIMTKEFDAAGWSNSNRSDFDRLIADAKR 1023
            MD  + +PD+TDWL TPL   S LESALHC+ICKEFYDTPM+TSCSH+FCSKCIRTSLS DGKCPACR ADQ SKLRNNWALQ +VA F  ARP+ L +AR   ++     +  KRKR +    + +    + R TRSKSRR+AASQ  PE++EI DS    ++D++PE    DGLV CP+GCGKRMKI+ V+ H+DRCEDEKK  Q  R K R  +  F    +++    KP +RL EL+YSLL +  + KKL+ELGIP++GSKQLM++RH EWVN+WNANCDS+NPRSKR+LLRELDAWERTQG +AP   N  AS IM K+FD  GW+  N+ +F RLIADA+R
Sbjct:    1 MDPSMDIPDATDWLNTPLRQFSDLESALHCEICKEFYDTPMITSCSHTFCSKCIRTSLSADGKCPACRTADQASKLRNNWALQTVVATFLAARPEALSLARREQELAAQSHRPGKRKREVTGPDDMEQTGGEGRTTRSKSRRVAASQ--PEAIEIGDSDEGGDADFEPELPP-DGLVECPLGCGKRMKIEQVEPHLDRCEDEKK--QASRAKPRTSVNGFGHSRSSSQHRAKPQERLAELNYSLLKDQAMRKKLEELGIPTSGSKQLMVRRHTEWVNIWNANCDSNNPRSKRELLRELDAWERTQGSKAPPAQNTSASAIMRKDFDGNGWAKKNKDEFSRLIADARR 342          
BLAST of mRNA_P-canaliculata_contig1006.126.1 vs. uniprot
Match: A0A6A6Q829_9PEZI (Postreplication repair E3 ubiquitin-protein ligase RAD18 n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6Q829_9PEZI)

HSP 1 Score: 397 bits (1019), Expect = 2.980e-133
Identity = 217/355 (61.13%), Postives = 259/355 (72.96%), Query Frame = 1
Query:    1 MDTDLSVPDSTDWLPTPLPSLSVLESALHCQICKEFYDTPMLTSCSHSFCSKCIRTSLSNDGKCPACRAADQTSKLRNNWALQEIVAAFRDARPKVLEMARDVQISEEKDK------KRKRTIADSSERDMDPEDARRTRSKSRRLAASQ-FRPESV-EIEDSANESDYQPEQEG--QDGLVMCPMGCGKRMKIDAVDGHIDRCEDEKKNKQLGRPKSRAHLGD----FPPPSNAAVRNPKPADRLPELSYSLLNETKLAKKLKELGIPSTGSKQLMIKRHREWVNLWNANCDSSNPRSKRDLLRELDAWERTQGGRAPLVNGLASTIMTKEFDAAGWSNSNRSDFDRLIADAKR 1023
            MD    +PDSTDWL TPL  LS LE+ALHCQICKEFYDTPM TSC H+FCSKCIRTSLS DGKCPACR ADQ SKLRNNWALQE+V AF  ARP  L +AR  + + E+ K      KRKR + DS +      + R TR KS+R+AAS   +PE++ E++DS   S ++PE E    DGLV CP+GCGKRMKI+AV+ H+DRCEDE+K  Q  R +SR  L +     P  +N++    KP DR+ E +YSLLNETKL KKL+E  IP+ G KQL+IKRH EWVNLWNANCDSS PRSKR+LL+ELD WERTQGGRAP VNGLAS++M K+FD  GW+N NR DF +LI  AKR
Sbjct:    1 MDGAFDIPDSTDWLNTPLNLLSTLENALHCQICKEFYDTPMTTSCCHTFCSKCIRTSLSTDGKCPACRTADQASKLRNNWALQEVVLAFLAARPAALGVARKERDALEEAKRGTKSGKRKRAVLDSDDVAQMEVEGRSTRRKSQRIAASHGSQPEAIDEVDDSDAGSTFEPEHEEPIDDGLVECPLGCGKRMKIEAVEPHLDRCEDERK--QASRSQSRTPLSNGLHRLPNTNNSSTT--KPQDRISEFNYSLLNETKLRKKLEEASIPAWGPKQLLIKRHTEWVNLWNANCDSSRPRSKRELLQELDTWERTQGGRAPGVNGLASSVMRKDFDGVGWANKNRGDFAKLIDQAKR 351          
BLAST of mRNA_P-canaliculata_contig1006.126.1 vs. uniprot
Match: M2MKU6_BAUPA (Postreplication repair E3 ubiquitin-protein ligase RAD18 (Fragment) n=1 Tax=Baudoinia panamericana (strain UAMH 10762) TaxID=717646 RepID=M2MKU6_BAUPA)

HSP 1 Score: 390 bits (1002), Expect = 1.790e-132
Identity = 201/346 (58.09%), Postives = 252/346 (72.83%), Query Frame = 1
Query:    1 MDTDLSVPDSTDWLPTPLPSLSVLESALHCQICKEFYDTPMLTSCSHSFCSKCIRTSLSNDGKCPACRAADQTSKLRNNWALQEIVAAFRDARPKVLEMARDVQISEEKDKKRKRTIADSSERDMDPEDARRTRSKSRRLAASQF-RPESVEIEDSANESDYQPEQEGQDGLVMCPMGCGKRMKIDAVDGHIDRCEDEKKNKQLGRPKSR---AHLGDFPPPSNAAVRNPKPADRLPELSYSLLNETKLAKKLKELGIPSTGSKQLMIKRHREWVNLWNANCDSSNPRSKRDLLRELDAWERTQGGRAPLVNG-LASTIMTKEFDAAGWSNSNRSDFDRLIADAKR 1023
            M +D  +PDSTDWL TPL  ++ LE+ALHCQICKEFYDTPM+TSCSH+FCS+CIRTSLS DG+CPACR ADQ SKLRNNWALQE+V AF+ ARP  + +AR  Q    +  KRKR + DS +        R TRSKSRRLAASQ   PE +EIED+  ++ Y+P+Q  +DGLV CP+GCGKRMKI+ V+ H+DRCE+E               A+    P PS+      +P +RL EL+YSLL E  + +KL+ELGIP+ GSKQLM++RH EWVNLWNANCDS +PR+KR+LL +LD WERTQGG+A   NG LA+ +M K+FD  GW++++R DF RLIADAKR
Sbjct:    1 MYSDFDIPDSTDWLNTPLKDIADLENALHCQICKEFYDTPMITSCSHTFCSRCIRTSLSTDGRCPACRTADQASKLRNNWALQEVVGAFQTARPAAISVARREQEQTRRPGKRKRAVLDSDDVAQAQRVGRTTRSKSRRLAASQTSEPEVMEIEDTDEDASYEPQQPPEDGLVECPLGCGKRMKIEQVEPHLDRCEEEXXXXXXXXXXXXXPPANGVGSPGPSSRQKGTARPQERLAELNYSLLKEQPMRRKLEELGIPAWGSKQLMVRRHTEWVNLWNANCDSDHPRTKRELLHDLDTWERTQGGKASTANGGLANGVMRKDFDGVGWASNHRDDFSRLIADAKR 346          
BLAST of mRNA_P-canaliculata_contig1006.126.1 vs. uniprot
Match: M3A2H6_PSEFD (Postreplication repair E3 ubiquitin-protein ligase RAD18 n=1 Tax=Pseudocercospora fijiensis (strain CIRAD86) TaxID=383855 RepID=M3A2H6_PSEFD)

HSP 1 Score: 390 bits (1003), Expect = 4.760e-132
Identity = 208/353 (58.92%), Postives = 264/353 (74.79%), Query Frame = 1
Query:    1 MDTDLSVPDSTDWLPTPLPSLSVLESALHCQICKEFYDTPMLTSCSHSFCSKCIRTSLSNDGKCPACRAADQTSKLRNNWALQEIVAAFRDARPKVLEMARDVQISEEKDK---KRKRTIADSSERDMDPED-ARRTRSKSRRLAASQF-RPESVEIEDSANESD--YQPEQEGQ---DGLVMCPMGCGKRMKIDAVDGHIDRCEDEKKNKQLGRPKSRAHLGDFP--PPSNAAVRNPKPADRLPELSYSLLNETKLAKKLKELGIPSTGSKQLMIKRHREWVNLWNANCDSSNPRSKRDLLRELDAWERTQGGRAPLVNGLASTIMTKEFDAAGWSNSNRSDFDRLIADAKR 1023
            MD+   VPDSTDW+ T +P L+ LE+ALHCQICKEFYDTPM+T+CSH+FCS+CIRTSLS+DGKCP CRA+DQ SKLRNNWA+QE+VA F +ARPK LE+AR  Q   E  K   KRKRT  D S+  ++ E   R TRSKSRR+A  Q  +PE++EIEDS +  D  +QP+ E +   DGLV CP+GCGKRMK + V  H+D+CEDE+   Q  + KS+ +L      PPS    +N +P DR+ ELSY +L ET LAKKLKE G+P+ GSKQL+I RH+EWVN+WNANCDS++PRS+RDLLR+L+ WERTQGG+AP  N L+ ++M K+FD A ++  +R DF RLIADAKR
Sbjct:    1 MDSSYDVPDSTDWIGTSVPDLAALENALHCQICKEFYDTPMITTCSHTFCSRCIRTSLSSDGKCPVCRASDQASKLRNNWAIQEVVATFINARPKALELARKAQQDIEHPKRKGKRKRTAVDDSDEVVEGETLGRTTRSKSRRMANPQSSQPEAIEIEDSEDGGDESFQPDAEPERPADGLVACPLGCGKRMKEEEVFNHLDKCEDEQT--QASKAKSKTNLNGVASKPPSR---QNSRPQDRINELSYGMLKETALAKKLKEQGLPNFGSKQLLISRHKEWVNIWNANCDSNDPRSRRDLLRDLEVWERTQGGKAPQGNVLSGSVMRKDFDGASYAKRHRDDFSRLIADAKR 348          
BLAST of mRNA_P-canaliculata_contig1006.126.1 vs. uniprot
Match: A0A4U0UEF3_9PEZI (Postreplication repair E3 ubiquitin-protein ligase RAD18 n=1 Tax=Salinomyces thailandica TaxID=706561 RepID=A0A4U0UEF3_9PEZI)

HSP 1 Score: 391 bits (1005), Expect = 2.240e-130
Identity = 214/348 (61.49%), Postives = 256/348 (73.56%), Query Frame = 1
Query:    1 MDTDLSVPDSTDWLPTPLPSLSVLESALHCQICKEFYDTPMLTSCSHSFCSKCIRTSLSNDGKCPACRAADQTSKLRNNWALQEIVAAFRDARPKVLEMARDVQ---ISEEKDKKRKRTIADSSERDMDPEDARRTRSKSRRLAASQF-RPESVEIEDSANESDYQPEQEGQDGLVMCPMGCGKRMKIDAVDGHIDRCEDEKKNKQLGRPKSRAHLGDF--PPPSNAAVRNPKPADRLPELSYSLLNETKLAKKLKELGIPSTGSKQLMIKRHREWVNLWNANCDSSNPRSKRDLLRELDAWERTQGGRA-PLVNGLASTIMTKEFDAAGWSNSNRSDFDRLIADAKR 1023
            MD+   VPDSTDWL TPL   + LE+ALHCQICKEFYDTPM+TSCSH+FCSKCIRTSLS DGKCPACR ADQ SKLRNNWALQE+VA+F+ ARP  + +AR  Q       +  KRKR + DS +      + R+TRSKSR++AASQ  + E++EIEDS  +  ++PE E  DGLV C +GCGKRMK + +D H+DRCEDEKK     R KSR  +  F    PS A  +N +P DRL EL+YSLL E  + KKL+ELGIP  G+KQLM+KRH EWVNLWNANCDS +PRSKR+LL +LD WERTQGGRA    N LA+ IM KEFD AGW++ N+ DF RLIADAKR
Sbjct:    1 MDSAYDVPDSTDWLNTPLKDFAELENALHCQICKEFYDTPMITSCSHTFCSKCIRTSLSTDGKCPACRTADQASKLRNNWALQEVVASFQSARPAAIGVARKQQELAAQARRPGKRKRAVLDSEDIVEVANEGRQTRSKSRQVAASQSSQNETIEIEDSDEDGAFEPEPE--DGLVECLLGCGKRMKPEQMDSHLDRCEDEKK--VASRAKSRTPVNGFGNQRPS-AGQQNTRPQDRLAELNYSLLKENAMRKKLEELGIPGWGAKQLMVKRHTEWVNLWNANCDSRHPRSKRELLGDLDTWERTQGGRAYGGQNSLATNIMRKEFDGAGWASKNKDDFSRLIADAKR 343          
BLAST of mRNA_P-canaliculata_contig1006.126.1 vs. uniprot
Match: A0A6A6FUN7_9PEZI (Postreplication repair E3 ubiquitin-protein ligase RAD18 n=1 Tax=Cercospora zeae-maydis SCOH1-5 TaxID=717836 RepID=A0A6A6FUN7_9PEZI)

HSP 1 Score: 386 bits (992), Expect = 4.180e-130
Identity = 210/351 (59.83%), Postives = 254/351 (72.36%), Query Frame = 1
Query:    1 MDTDLSVPDSTDWLPTPLPSLSVLESALHCQICKEFYDTPMLTSCSHSFCSKCIRTSLSNDGKCPACRAADQTSKLRNNWALQEIVAAFRDARPKVLEMARDVQ---ISEEKDKKRKR-TIADSSERDMDPEDARRTRSKSRRLAASQF-RPESVEIEDSANESD--YQPEQEGQDGLVMCPMGCGKRMKIDAVDGHIDRCEDEKKNKQLGRPKSRAHLGDFP---PPSNAAVRNPKPADRLPELSYSLLNETKLAKKLKELGIPSTGSKQLMIKRHREWVNLWNANCDSSNPRSKRDLLRELDAWERTQGGRAPLVNGLASTIMTKEFDAAGWSNSNRSDFDRLIADAKR 1023
            MD    VPDSTDWL TPL + + LE+ALHCQICKEFYDTPM+TSC+H+FCS+CIRTSLS DGKCPACRA+DQ SKLRNNWA+QE+V+ F DARP  LE+AR  Q    +  K+ KRKR T+ DS +     E  R TR+KSRR+AA+Q  + E +EI DS  E+D  Y+ E   +DGLV CP+GCGKRMK   V  H+DRCEDE+K  Q  R KSR  L  F    PPS    R   P DR+ ELSY +L +  L+ KLKE G+P+ GSKQLMI RHREWVN+WNANCDS+NPR +RDLLR+LD WE+TQGG+AP  NGL+  +M K+FD A +S  +  DF RLIADAKR
Sbjct:    1 MDDAYDVPDSTDWLETPLDAFAPLENALHCQICKEFYDTPMITSCNHTFCSRCIRTSLSADGKCPACRASDQASKLRNNWAIQEVVSTFLDARPTALEVARKSQQETATPNKNGKRKRPTVPDSDDVADVQESGRTTRAKSRRIAATQSSQQEPIEIGDSDEEADEEYKAESPPKDGLVECPLGCGKRMKEAEVFNHLDRCEDEQK--QASRAKSRTPLNGFASSRPPSGQGAR---PQDRINELSYGMLKDKALSAKLKEQGLPAFGSKQLMINRHREWVNIWNANCDSNNPRPRRDLLRDLDIWEKTQGGKAPQGNGLSHAVMRKDFDGAAYSKKHNDDFSRLIADAKR 346          
BLAST of mRNA_P-canaliculata_contig1006.126.1 vs. uniprot
Match: A0A139IGY2_9PEZI (Postreplication repair E3 ubiquitin-protein ligase RAD18 n=1 Tax=Pseudocercospora musae TaxID=113226 RepID=A0A139IGY2_9PEZI)

HSP 1 Score: 390 bits (1001), Expect = 3.690e-129
Identity = 202/350 (57.71%), Postives = 265/350 (75.71%), Query Frame = 1
Query:    1 MDTDLSVPDSTDWLPTPLPSLSVLESALHCQICKEFYDTPMLTSCSHSFCSKCIRTSLSNDGKCPACRAADQTSKLRNNWALQEIVAAFRDARPKVLEMARDVQISEEKDK---KRKRTIADSSERDMDPE-DARRTRSKSRRLAASQF-RPESVEIEDSANESD--YQPEQEGQ--DGLVMCPMGCGKRMKIDAVDGHIDRCEDEKKNKQLGRPKSRAHLGDFPPPSNAAVRNPKPADRLPELSYSLLNETKLAKKLKELGIPSTGSKQLMIKRHREWVNLWNANCDSSNPRSKRDLLRELDAWERTQGGRAPLVNGLASTIMTKEFDAAGWSNSNRSDFDRLIADAKR 1023
            MD+   VPDSTDW+ T +P L+ LE+ALHCQICKEFYDTPM+T+C+H+FCS+CIRTSLS+DGKCPACRA+DQ SKLRNNWA+QE+VA F +ARPK LE+AR      E+ K   KRKRT    ++  M+ E  +R TRSK+RR+A S+  +PE++EI+DS + +D  +QP+ E +  DGLV CP+GCGKRMK + V  H+D+CEDE+K  Q  + K + +L   P     + +N +P DR+ ELSY +L ET LAKKLKE G+P+ GSKQL+I RH+EWVN+WNANCDS++PRS+RDLLR+LD WERTQGG+AP  N L+ ++M K+FD A ++  +  DF RLIADAKR
Sbjct:    1 MDSSYDVPDSTDWIGTSIPDLAALENALHCQICKEFYDTPMITTCNHTFCSRCIRTSLSSDGKCPACRASDQASKLRNNWAIQEVVATFINARPKALEVARKAHQEVEQPKRNGKRKRTALQEADEAMEAETSSRTTRSKTRRIANSRSSQPEAIEIDDSEDGADEAFQPDSESEPGDGLVACPLGCGKRMKEEEVFNHLDKCEDEQK--QAAKTKPKTNLKGVPS-KTPSRQNSRPQDRINELSYGMLKETALAKKLKEQGLPNFGSKQLLISRHKEWVNIWNANCDSNDPRSRRDLLRDLDVWERTQGGKAPQGNVLSGSVMRKDFDGASYAKRHHDDFSRLIADAKR 347          
BLAST of mRNA_P-canaliculata_contig1006.126.1 vs. uniprot
Match: A0A6A6CHL4_9PEZI (Postreplication repair E3 ubiquitin-protein ligase RAD18 n=1 Tax=Zasmidium cellare ATCC 36951 TaxID=1080233 RepID=A0A6A6CHL4_9PEZI)

HSP 1 Score: 385 bits (988), Expect = 1.310e-127
Identity = 210/347 (60.52%), Postives = 251/347 (72.33%), Query Frame = 1
Query:    1 MDTDLSVPDSTDWLPTPLPSLSVLESALHCQICKEFYDTPMLTSCSHSFCSKCIRTSLSNDGKCPACRAADQTSKLRNNWALQEIVAAFRDARPKVLEMARDVQISEEKDK---KRKR-TIADSSERDMDPEDARRTRSKSRRLAASQ-FRPESVEIEDSANESD-YQPEQEGQDGLVMCPMGCGKRMKIDAVDGHIDRCEDEKKNKQLGRPKSRAHLGDFPPPSNAAVRNPKPADRLPELSYSLLNETKLAKKLKELGIPSTGSKQLMIKRHREWVNLWNANCDSSNPRSKRDLLRELDAWERTQGGRAPLVNGLASTIMTKEFDAAGWSNSNRSDFDRLIADAKR 1023
            MD+   VPDSTDWL TPL   S LE+ALHCQICKEFYDTPM+TSC+H+FCSKCIRTSLS DGKCPACR +DQ +KLRNNWALQE+V  F  ARP  L +AR  Q   E  K   KRKR  + DS +        R TRSKSRR+AASQ  +PE +EI DS +E + Y PE    DG V CP+GCGKRMK   V  H+DRCEDEKK  Q  R K+R  L  F    +A+  N +P DR+ EL+YS++ E  L KKLK++GIP  G+KQL+I+RHREWVN+WNANCDS++PRSKRDLL +LD WERTQGGRAP  NGL+STIM K+FD   +S  ++ +F RLIADAKR
Sbjct:    1 MDSAYDVPDSTDWLSTPLNGFSELENALHCQICKEFYDTPMITSCNHTFCSKCIRTSLSADGKCPACRTSDQANKLRNNWALQEVVTTFVTARPAALGVARQAQDDLEAPKRVGKRKRPAVLDSDDISEAEASGRTTRSKSRRIAASQESQPEPIEIADSNDEDEEYMPEPPPDDGRVECPLGCGKRMKEVDVFTHLDRCEDEKK--QASRSKARTPLNGFG--RSASGHNARPQDRINELNYSMMKELALKKKLKDVGIPDWGTKQLLIQRHREWVNIWNANCDSNHPRSKRDLLYDLDVWERTQGGRAPNPNGLSSTIMKKDFDGDAYSKRHQDEFSRLIADAKR 343          
BLAST of mRNA_P-canaliculata_contig1006.126.1 vs. uniprot
Match: A0A2S6C9Y1_9PEZI (Postreplication repair E3 ubiquitin-protein ligase RAD18 n=3 Tax=Cercospora TaxID=29002 RepID=A0A2S6C9Y1_9PEZI)

HSP 1 Score: 385 bits (990), Expect = 1.360e-127
Identity = 207/351 (58.97%), Postives = 257/351 (73.22%), Query Frame = 1
Query:    1 MDTDLSVPDSTDWLPTPLPSLSVLESALHCQICKEFYDTPMLTSCSHSFCSKCIRTSLSNDGKCPACRAADQTSKLRNNWALQEIVAAFRDARPKVLEMARDVQ---ISEEKDKKRKRTIADSSERDMD-PEDARRTRSKSRRLAASQF-RPESVEIEDSANESD--YQPEQEGQDGLVMCPMGCGKRMKIDAVDGHIDRCEDEKKNKQLGRPKSRAHLGDFP---PPSNAAVRNPKPADRLPELSYSLLNETKLAKKLKELGIPSTGSKQLMIKRHREWVNLWNANCDSSNPRSKRDLLRELDAWERTQGGRAPLVNGLASTIMTKEFDAAGWSNSNRSDFDRLIADAKR 1023
            MD    VPDSTDWL TPL + + LE+ALHCQICKEFYDTPM+TSC+H+FCS+CIRTSLS DGKCPACRA+DQ SKLRNNWA+QE+VA F DARP  LE+AR  Q    + +K  KRKR I   S+   +  E  R TR+KSRR+AAS+  + E++EIEDS  E++  Y+P+   +DGLV CP+GCGKRMK   V  H+D+CEDE+K  Q  R KSR  L  F    PPS    R   P DR+ EL+Y +L +  L+ KLKE G+P+ GSKQLMI RHREWVN+WNANCDS++PRS+RDLLR+LD WE+TQGG+AP  NGL+  +M K+FD A +S  +  DF RLIADA+R
Sbjct:    1 MDDAYDVPDSTDWLETPLKAFAPLENALHCQICKEFYDTPMITSCNHTFCSRCIRTSLSADGKCPACRASDQASKLRNNWAIQEVVATFLDARPTALEVARKSQQETATPKKTGKRKRPIIPGSDDVAEVQESGRTTRAKSRRIAASESSQQEAIEIEDSDEEAEEEYKPDSPPKDGLVECPLGCGKRMKEAEVFNHLDKCEDEQK--QANRAKSRTPLNGFVSSRPPSGQGAR---PQDRINELNYGMLKDKALSAKLKEQGLPAFGSKQLMINRHREWVNIWNANCDSNSPRSRRDLLRDLDVWEKTQGGKAPQGNGLSHAVMRKDFDGAAYSRKHNDDFSRLIADARR 346          
BLAST of mRNA_P-canaliculata_contig1006.126.1 vs. uniprot
Match: UPI001D6142AC (Postreplication repair E3 ubiquitin-protein ligase rad18 n=1 Tax=Passalora fulva TaxID=5499 RepID=UPI001D6142AC)

HSP 1 Score: 384 bits (986), Expect = 3.460e-127
Identity = 207/348 (59.48%), Postives = 254/348 (72.99%), Query Frame = 1
Query:    1 MDTDLSVPDSTDWLPTPLPSLSVLESALHCQICKEFYDTPMLTSCSHSFCSKCIRTSLSNDGKCPACRAADQTSKLRNNWALQEIVAAFRDARPKVLEMARDVQISEE----KDKKRKR-TIADSSERDMDPEDARRTRSKSRRLAASQ-FRPESVEIEDSANES-DYQPEQEGQDGLVMCPMGCGKRMKIDAVDGHIDRCEDEKKNKQLGRPKSRAHLGDFPPPSNAAVRNPKPADRLPELSYSLLNETKLAKKLKELGIPSTGSKQLMIKRHREWVNLWNANCDSSNPRSKRDLLRELDAWERTQGGRAPLVNGLASTIMTKEFDAAGWSNSNRSDFDRLIADAKR 1023
            MD    V DSTDWL TPL  LS LE+ALHCQICKEFYDTPM+TSC+H+FCS+CIRTSLS DGKCPACRAADQ +KLRNNWA+QE+V+ F  ARP  L +AR  Q   E    +  KRKR T AD  + D      R TRSKSRR AASQ  +PE++EIEDS +E  D  PE E  DGLV CP+ CGKRMK + V GH+D+CEDEKK  Q  R KSR  L  F      + ++ +P DR+ EL+YS++ ET L KK+KE  +P+ GSKQLMI RH+EWVN+WNANCDS++PRS+R+LL +LD WERTQGG+AP  +GL++TIM K+FD   +S  ++ +F RLIADAKR
Sbjct:    1 MDDAYHVADSTDWLNTPLKELSSLENALHCQICKEFYDTPMITSCNHTFCSRCIRTSLSADGKCPACRAADQANKLRNNWAVQEVVSTFLAARPTALAVARKAQEEAEDAPKRPGKRKRGTAADLDDGDHAASSRRTTRSKSRRTAASQDSQPETIEIEDSNDEGEDIPPEPEVNDGLVECPLACGKRMKEEQVFGHLDKCEDEKK--QAARSKSRTPLTGFAISRPLSSQSTRPQDRINELNYSMMKETALTKKMKEQALPAWGSKQLMITRHKEWVNIWNANCDSNHPRSRRELLHDLDVWERTQGGKAPNASGLSNTIMRKDFDGYAYSRRHQDEFSRLIADAKR 346          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig1006.126.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G1LIV7_9PEZI1.910e-13359.37Postreplication repair E3 ubiquitin-protein ligase... [more]
A0A6A6Q829_9PEZI2.980e-13361.13Postreplication repair E3 ubiquitin-protein ligase... [more]
M2MKU6_BAUPA1.790e-13258.09Postreplication repair E3 ubiquitin-protein ligase... [more]
M3A2H6_PSEFD4.760e-13258.92Postreplication repair E3 ubiquitin-protein ligase... [more]
A0A4U0UEF3_9PEZI2.240e-13061.49Postreplication repair E3 ubiquitin-protein ligase... [more]
A0A6A6FUN7_9PEZI4.180e-13059.83Postreplication repair E3 ubiquitin-protein ligase... [more]
A0A139IGY2_9PEZI3.690e-12957.71Postreplication repair E3 ubiquitin-protein ligase... [more]
A0A6A6CHL4_9PEZI1.310e-12760.52Postreplication repair E3 ubiquitin-protein ligase... [more]
A0A2S6C9Y1_9PEZI1.360e-12758.97Postreplication repair E3 ubiquitin-protein ligase... [more]
UPI001D6142AC3.460e-12759.48Postreplication repair E3 ubiquitin-protein ligase... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig1006contigP-canaliculata_contig1006:2345..3367 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score399.4
Seed ortholog evalue1.6e-108
Seed eggNOG ortholog83344.XP_007930941.1
Preferred nameRAD18
KEGG koko:K10627
GOsGO:0000151,GO:0000228,GO:0000731,GO:0000785,GO:0000790,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0004842,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006310,GO:0006312,GO:0006464,GO:0006508,GO:0006511,GO:0006513,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0010498,GO:0016462,GO:0016567,GO:0016740,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0018130,GO:0019438,GO:0019538,GO:0019787,GO:0019941,GO:0019985,GO:0030163,GO:0031144,GO:0031503,GO:0031974,GO:0031981,GO:0032446,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034629,GO:0034641,GO:0034645,GO:0034654,GO:0036211,GO:0036297,GO:0042275,GO:0042276,GO:0042623,GO:0043142,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0046483,GO:0050896,GO:0051179,GO:0051603,GO:0051641,GO:0051716,GO:0061630,GO:0061659,GO:0070013,GO:0070647,GO:0070727,GO:0070987,GO:0071704,GO:0071897,GO:0090304,GO:0097159,GO:0097505,GO:0140096,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1902494,GO:1990139,GO:1990234,GO:1990920
EggNOG free text desc.Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
EggNOG OGs1ZXI8@147541,38DW0@33154,3MI6G@451867,3NYXM@4751,3QPM4@4890,COG5432@1,KOG0287@2759
EC2.3.2.27
COG Functional cat.O
Best tax levelDothideomycetidae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03400,ko04121
Hectar predicted targeting categoryother localisation
Exons1
Model size1023
Cds size1023
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815579.617869-CDS-P-canaliculata_contig1006:2344..33671622815579.617869-CDS-P-canaliculata_contig1006:2344..3367Pelvetia canaliculata dioeciousCDSP-canaliculata_contig1006 2345..3367 -
1693494148.354235-CDS-P-canaliculata_contig1006:2344..33671693494148.354235-CDS-P-canaliculata_contig1006:2344..3367Pelvetia canaliculata dioeciousCDSP-canaliculata_contig1006 2345..3367 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig1006.126.1prot_P-canaliculata_contig1006.126.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig1006 2345..3367 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig1006.126.1

>prot_P-canaliculata_contig1006.126.1 ID=prot_P-canaliculata_contig1006.126.1|Name=mRNA_P-canaliculata_contig1006.126.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=341bp
MDTDLSVPDSTDWLPTPLPSLSVLESALHCQICKEFYDTPMLTSCSHSFC
SKCIRTSLSNDGKCPACRAADQTSKLRNNWALQEIVAAFRDARPKVLEMA
RDVQISEEKDKKRKRTIADSSERDMDPEDARRTRSKSRRLAASQFRPESV
EIEDSANESDYQPEQEGQDGLVMCPMGCGKRMKIDAVDGHIDRCEDEKKN
KQLGRPKSRAHLGDFPPPSNAAVRNPKPADRLPELSYSLLNETKLAKKLK
ELGIPSTGSKQLMIKRHREWVNLWNANCDSSNPRSKRDLLRELDAWERTQ
GGRAPLVNGLASTIMTKEFDAAGWSNSNRSDFDRLIADAKR
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mRNA from alignment at P-canaliculata_contig1006:2345..3367-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig1006.126.1 ID=mRNA_P-canaliculata_contig1006.126.1|Name=mRNA_P-canaliculata_contig1006.126.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1023bp|location=Sequence derived from alignment at P-canaliculata_contig1006:2345..3367- (Pelvetia canaliculata dioecious)
ATGGACACCGATCTCAGCGTCCCGGACTCCACCGACTGGCTGCCGACGCC TCTCCCATCGCTCTCCGTGCTCGAAAGCGCTCTCCACTGCCAGATCTGCA AAGAATTCTACGACACGCCCATGTTGACGTCGTGTTCGCACTCCTTCTGC TCGAAATGCATCCGCACGAGTTTGAGCAACGACGGCAAATGCCCGGCTTG TCGCGCCGCGGACCAGACCTCGAAGCTGCGGAACAACTGGGCGTTGCAGG AAATCGTTGCTGCATTCCGTGACGCGAGGCCAAAGGTATTGGAGATGGCG AGAGATGTTCAGATCTCTGAGGAGAAGGATAAGAAACGCAAACGGACAAT CGCAGACTCTTCTGAACGGGACATGGACCCGGAGGACGCACGAAGGACCC GCAGTAAGAGTCGGCGGCTGGCCGCGTCCCAATTCCGCCCGGAAAGTGTG GAGATTGAGGACAGTGCAAATGAGAGCGACTACCAACCCGAACAGGAAGG GCAAGATGGGCTGGTGATGTGTCCGATGGGTTGCGGGAAGCGCATGAAGA TCGATGCTGTCGACGGCCACATCGATCGGTGCGAGGATGAGAAGAAGAAC AAGCAGCTAGGTCGACCGAAGTCGCGAGCACATTTGGGCGATTTCCCCCC CCCAAGCAACGCCGCCGTGCGGAACCCAAAGCCTGCAGATCGTTTACCGG AGCTGAGTTACTCGCTGCTCAACGAGACCAAACTGGCGAAGAAACTCAAG GAGCTTGGCATCCCCAGTACCGGCTCGAAGCAGCTCATGATCAAACGACA TCGGGAGTGGGTCAACCTCTGGAATGCAAACTGCGACTCAAGCAACCCGC GAAGTAAACGAGACCTCCTCCGCGAACTGGACGCTTGGGAGCGGACGCAA GGTGGCCGGGCACCTCTAGTCAATGGCCTGGCAAGTACGATCATGACGAA AGAGTTCGACGCAGCGGGCTGGTCCAACTCGAACAGATCGGACTTTGACC GACTAATCGCGGACGCCAAGAGG
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Coding sequence (CDS) from alignment at P-canaliculata_contig1006:2345..3367-

>mRNA_P-canaliculata_contig1006.126.1 ID=mRNA_P-canaliculata_contig1006.126.1|Name=mRNA_P-canaliculata_contig1006.126.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2046bp|location=Sequence derived from alignment at P-canaliculata_contig1006:2345..3367- (Pelvetia canaliculata dioecious)
ATGGACACCGATCTCAGCGTCCCGGACTCCACCGACTGGCTGCCGACGCC
TCTCCCATCGCTCTCCGTGCTCGAAAGCGCTCTCCACTGCCAGATCTGCA
AAGAATTCTACGACACGCCCATGTTGACGTCGTGTTCGCACTCCTTCTGC
TCGAAATGCATCCGCACGAGTTTGAGCAACGACGGCAAATGCCCGGCTTG
TCGCGCCGCGGACCAGACCTCGAAGCTGCGGAACAACTGGGCGTTGCAGG
AAATCGTTGCTGCATTCCGTGACGCGAGGCCAAAGGTATTGGAGATGGCG
AGAGATGTTCAGATCTCTGAGGAGAAGGATAAGAAACGCAAACGGACAAT
CGCAGACTCTTCTGAACGGGACATGGACCCGGAGGACGCACGAAGGACCC
GCAGTAAGAGTCGGCGGCTGGCCGCGTCCCAATTCCGCCCGGAAAGTGTG
GAGATTGAGGACAGTGCAAATGAGAGCGACTACCAACCCGAACAGGAAGG
GCAAGATGGGCTGGTGATGTGTCCGATGGGTTGCGGGAAGCGCATGAAGA
TCGATGCTGTCGACGGCCACATCGATCGGTGCGAGGATGAGAAGAAGAAC
AAGCAGCTAGGTCGACCGAAGTCGCGAGCACATTTGGGCGATTTCCCCCC
CCCAAGCAACGCCGCCGTGCGGAACCCAAAGCCTGCAGATCGTTTACCGG
AGCTGAGTTACTCGCTGCTCAACGAGACCAAACTGGCGAAGAAACTCAAG
GAGCTTGGCATCCCCAGTACCGGCTCGAAGCAGCTCATGATCAAACGACA
TCGGGAGTGGGTCAACCTCTGGAATGCAAACTGCGACTCAAGCAACCCGC
GAAGTAAACGAGACCTCCTCCGCGAACTGGACGCTTGGGAGCGGACGCAA
GGTGGCCGGGCACCTCTAGTCAATGGCCTGGCAAGTACGATCATGACGAA
AGAGTTCGACGCAGCGGGCTGGTCCAACTCGAACAGATCGGACTTTGACC
GACTAATCGCGGACGCCAAGAGGATGGACACCGATCTCAGCGTCCCGGAC
TCCACCGACTGGCTGCCGACGCCTCTCCCATCGCTCTCCGTGCTCGAAAG
CGCTCTCCACTGCCAGATCTGCAAAGAATTCTACGACACGCCCATGTTGA
CGTCGTGTTCGCACTCCTTCTGCTCGAAATGCATCCGCACGAGTTTGAGC
AACGACGGCAAATGCCCGGCTTGTCGCGCCGCGGACCAGACCTCGAAGCT
GCGGAACAACTGGGCGTTGCAGGAAATCGTTGCTGCATTCCGTGACGCGA
GGCCAAAGGTATTGGAGATGGCGAGAGATGTTCAGATCTCTGAGGAGAAG
GATAAGAAACGCAAACGGACAATCGCAGACTCTTCTGAACGGGACATGGA
CCCGGAGGACGCACGAAGGACCCGCAGTAAGAGTCGGCGGCTGGCCGCGT
CCCAATTCCGCCCGGAAAGTGTGGAGATTGAGGACAGTGCAAATGAGAGC
GACTACCAACCCGAACAGGAAGGGCAAGATGGGCTGGTGATGTGTCCGAT
GGGTTGCGGGAAGCGCATGAAGATCGATGCTGTCGACGGCCACATCGATC
GGTGCGAGGATGAGAAGAAGAACAAGCAGCTAGGTCGACCGAAGTCGCGA
GCACATTTGGGCGATTTCCCCCCCCCAAGCAACGCCGCCGTGCGGAACCC
AAAGCCTGCAGATCGTTTACCGGAGCTGAGTTACTCGCTGCTCAACGAGA
CCAAACTGGCGAAGAAACTCAAGGAGCTTGGCATCCCCAGTACCGGCTCG
AAGCAGCTCATGATCAAACGACATCGGGAGTGGGTCAACCTCTGGAATGC
AAACTGCGACTCAAGCAACCCGCGAAGTAAACGAGACCTCCTCCGCGAAC
TGGACGCTTGGGAGCGGACGCAAGGTGGCCGGGCACCTCTAGTCAATGGC
CTGGCAAGTACGATCATGACGAAAGAGTTCGACGCAGCGGGCTGGTCCAA
CTCGAACAGATCGGACTTTGACCGACTAATCGCGGACGCCAAGAGG
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