prot_P-canaliculata_contig100598.124.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig100598.124.1
Unique Nameprot_P-canaliculata_contig100598.124.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length262
Homology
BLAST of mRNA_P-canaliculata_contig100598.124.1 vs. uniprot
Match: A0A7W6EIH7_9HYPH (Uncharacterized protein n=1 Tax=Pseudochelatococcus contaminans TaxID=1538103 RepID=A0A7W6EIH7_9HYPH)

HSP 1 Score: 55.5 bits (132), Expect = 4.070e-5
Identity = 59/251 (23.51%), Postives = 106/251 (42.23%), Query Frame = 0
Query:   23 LVERVPAGREVVEKLLSSDTDPYVSAVLNQESIVGSMFGKDQFEDGSFSKATLITDSEKFELKEDGCAELMALSESVWRAGSTSSLIQKKFIDRAFFDWV--ALKPRDCKVEFVEFLDIEVEAAVQECKVLIPLHRVRSTVRFRI-------LGCLVRE---VNGGDVEQWFPSEKDAEYAVKMRRSLQGFCCVEVELSAEPSYAAEEALRIANIIASMIAMHSLTGVILGARYNGVPLGREITPTSTAIV 261
            LV ++ A R       S  +  + +A +  + +V +     Q  DG    A + TD+  + L ED  + +  L++ V      +  + + FI + F  W   A    D +  + + L       V+ C+VL P+  +     F++       LG  + E     GG+      ++ DA   ++M R   G   + +EL AEP +A E+AL IA    +++ +     ++         +G EI P+S  IV
Sbjct:  275 LVSKIRALRFAARPSPSFPSQRHAAATITPDDLVDTPVFTGQDADGMRVVAFIHTDTTPYGLAEDDFSGVATLADLVRETPWAAQSLGQSFIQQTFIIWARSAFSGSDAE-SYSDALSAAARNTVRTCRVLAPVAYLEVQSAFQLGPVAIEPLGIQLIEDFRSRGGEPSPEQAADVDA-LLLQMERDFVGHAAIAIELIAEPHFAQEKALLIAQDCVALLRVFCPESIVAALLCPMALMGAEIMPSSKLIV 523          
BLAST of mRNA_P-canaliculata_contig100598.124.1 vs. uniprot
Match: A0A119UPA4_9BURK (Uncharacterized protein n=3 Tax=Burkholderia ubonensis TaxID=101571 RepID=A0A119UPA4_9BURK)

HSP 1 Score: 55.1 bits (131), Expect = 5.370e-5
Identity = 48/193 (24.87%), Postives = 83/193 (43.01%), Query Frame = 0
Query:   78 DSEKFELKEDGCAELMALSESVWRAGSTSSLIQKKFIDRAFFDWVALKPRDCKVEFVEFLDIEVEAAVQECKVLIPLHRVR-------STVRFRILGCLVREVNGGDVEQWFPSEKD--AEYAVKMRRSLQGFCCVEVELSAEPSYAAEEALRIANIIASMIAMHSLTGVILGARYNGVPL-GREITPTSTAI 260
            + + + L E+    L +L+++V +A    + + +KF++ AFFDW   +    ++ F E L       V   +V  P+  +          VR   +   V E          P ++    ++  K+R  +QG+    V + AEP++A E ALRIA     ++   S         ++ V L G E  PTS  I
Sbjct:  292 EGKSYGLVENDYKSLDSLTDAVLKAAWARTSLSRKFVETAFFDWARQQFPAAQLSFPEALSDAARDTVTNVEVWAPIANMEVEQGFDFGPVRIESMTAAVMENLRSRAPSPRPEQQQEVGQFFEKLRGEIQGYAAAVVSIEAEPAFAVERALRIAQDAVGLLTFFS-PAAPRSYLFSPVALAGAEYIPTSKLI 483          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100598.124.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7W6EIH7_9HYPH4.070e-523.51Uncharacterized protein n=1 Tax=Pseudochelatococcu... [more]
A0A119UPA4_9BURK5.370e-524.87Uncharacterized protein n=3 Tax=Burkholderia ubone... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig100598contigP-canaliculata_contig100598:21..806 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig100598.124.1mRNA_P-canaliculata_contig100598.124.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig100598 21..806 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig100598.124.1 ID=prot_P-canaliculata_contig100598.124.1|Name=mRNA_P-canaliculata_contig100598.124.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=262bp
MSLDLHQNAVAAFNTRANHIASLVERVPAGREVVEKLLSSDTDPYVSAVL
NQESIVGSMFGKDQFEDGSFSKATLITDSEKFELKEDGCAELMALSESVW
RAGSTSSLIQKKFIDRAFFDWVALKPRDCKVEFVEFLDIEVEAAVQECKV
LIPLHRVRSTVRFRILGCLVREVNGGDVEQWFPSEKDAEYAVKMRRSLQG
FCCVEVELSAEPSYAAEEALRIANIIASMIAMHSLTGVILGARYNGVPLG
REITPTSTAIVF
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