prot_P-canaliculata_contig100537.119.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig100537.119.1
Unique Nameprot_P-canaliculata_contig100537.119.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length124
Homology
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BLAST of mRNA_P-canaliculata_contig100537.119.1 vs. uniprot
Match: A0A5C5Y5Z8_9PLAN (PEP-CTERM motif protein n=3 Tax=Crateriforma conspicua TaxID=2527996 RepID=A0A5C5Y5Z8_9PLAN)

HSP 1 Score: 83.2 bits (204), Expect = 4.160e-17
Identity = 58/128 (45.31%), Postives = 70/128 (54.69%), Query Frame = 0 
Query:    3 DNPGGTRWLLGTSPGTLGSSPDALLVDDS------NAGGFILTDANGIQNGVGPVFHSALTFDTFGLGSSSLVLAEGALEISVEGSDPVSIDFGTATVNVSAIPEPSSLCLLG-SIAGGLFLRRRRQL 123
            D PG  RW L  S GTL  S   +LV+DS        GG  L    GIQNG GPV HS LTFD  G G++ L    G   I+  G+ P  +DF TATV  SA+PEPSS  ++   +A   F  RRR+L
Sbjct:   97 DIPGLDRWNLAISNGTLNDS--GVLVNDSLGAALPGLGG--LAFYQGIQNGAGPVLHSVLTFDVIGGGTTELGFERGIGNIASNGAVP-GLDFRTATVVASAVPEPSSFAMIACGLAATAFQVRRRKL 219
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100537.119.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A5C5Y5Z8_9PLAN4.160e-1745.31PEP-CTERM motif protein n=3 Tax=Crateriforma consp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013424PEP-CTERM protein-sorting domainTIGRFAMTIGR02595TIGR02595coord: 99..122
e-value: 3.0E-6
score: 25.7
IPR013424PEP-CTERM protein-sorting domainPFAMPF07589PEP-CTERMcoord: 98..120
e-value: 7.2E-5
score: 22.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig100537contigP-canaliculata_contig100537:119..490 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig100537.119.1mRNA_P-canaliculata_contig100537.119.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig100537 119..490 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig100537.119.1 ID=prot_P-canaliculata_contig100537.119.1|Name=mRNA_P-canaliculata_contig100537.119.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=124bp
DIDNPGGTRWLLGTSPGTLGSSPDALLVDDSNAGGFILTDANGIQNGVGP
VFHSALTFDTFGLGSSSLVLAEGALEISVEGSDPVSIDFGTATVNVSAIP
EPSSLCLLGSIAGGLFLRRRRQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013424PEP_exosort_dom