prot_P-canaliculata_contig100450.107.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig100450.107.1
Unique Nameprot_P-canaliculata_contig100450.107.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length235
Homology
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BLAST of mRNA_P-canaliculata_contig100450.107.1 vs. uniprot
Match: A0A6B3LCC3_9BACT (Uncharacterized protein n=1 Tax=Sulfuriroseicoccus oceanibius TaxID=2707525 RepID=A0A6B3LCC3_9BACT)

HSP 1 Score: 73.6 bits (179), Expect = 1.260e-11
Identity = 63/221 (28.51%), Postives = 98/221 (44.34%), Query Frame = 0 
Query:   29 SKVKFILGVPEDFDPVKGCPVFVQWTTTDV-------KSNLKGAKNYRSSCNDKGWMLVSVD---GLP--DSGETWSNSVFYAGMKEFFEQLHAAYPSSTEWRVATGGFSGGAKICQWMGG--VMNELEGVNVMGYYIGGGNEVLFQYGIDDLGVSKKGYADAKAFVSSGDSDKFVSAHSRELVVEGCKEAGL-DVRDEVYTGGHRMNRDEFEKALDWFVE 234
            +++K  + +P+ FDP K  P  V W +  +       K N      +      +GW++V+ D   G P  +  E  S     A      E L  A+P    W+ A  G SGG K   +  G  ++N+L   NV G ++ G N+        +    K G    K ++S+G SD   +    E V    K     ++R E++ GGH + ++EF KAL WFVE
Sbjct:  136 TELKISIALPKGFDPTK--PQRVMWVSAPINNENERKKGNAGAMWAFAGPGTAEGWVVVAADTDMGNPRVEDNER-SKGTDLAVHTAAVEALTEAWPQFKTWQFACCGGSGGGKASFYRVGDLLVNDL---NVTGMFLAGCNQDCTADARAETRFKKSGLRKIKVWISNGRSDTISNVGHAESVAASMKGNRYGEIRLELFDGGHVIKKEEFVKALQWFVE 350
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100450.107.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6B3LCC3_9BACT1.260e-1128.51Uncharacterized protein n=1 Tax=Sulfuriroseicoccus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029058Alpha/Beta hydrolase foldGENE3D3.40.50.1820coord: 33..234
e-value: 1.8E-10
score: 43.1
IPR029058Alpha/Beta hydrolase foldSUPERFAMILY53474alpha/beta-Hydrolasescoord: 74..233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig100450contigP-canaliculata_contig100450:2..706 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig100450.107.1mRNA_P-canaliculata_contig100450.107.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig100450 2..706 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig100450.107.1 ID=prot_P-canaliculata_contig100450.107.1|Name=mRNA_P-canaliculata_contig100450.107.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=235bp
KGGEGWGTSFSSGYSGSWLRDLAEGHEVSKVKFILGVPEDFDPVKGCPVF
VQWTTTDVKSNLKGAKNYRSSCNDKGWMLVSVDGLPDSGETWSNSVFYAG
MKEFFEQLHAAYPSSTEWRVATGGFSGGAKICQWMGGVMNELEGVNVMGY
YIGGGNEVLFQYGIDDLGVSKKGYADAKAFVSSGDSDKFVSAHSRELVVE
GCKEAGLDVRDEVYTGGHRMNRDEFEKALDWFVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase