prot_P-canaliculata_contig10042.105.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10042.105.1
Unique Nameprot_P-canaliculata_contig10042.105.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length707
Homology
BLAST of mRNA_P-canaliculata_contig10042.105.1 vs. uniprot
Match: D7G5D6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D6_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 1.310e-50
Identity = 125/321 (38.94%), Postives = 173/321 (53.89%), Query Frame = 0
Query:  391 DLYGTCPEGSIGDNDIPPCYVCPNGKTSREGSSTCFSTALRYVRASDELLEAMEGDATGGFAGPGNAEIDGAEHIWKRITLDEEDHGVLEVTGTFEREVNGDASLPSSTALFVYLEPFDGP--FFRGVGTIDSSTGVFTARVTGVPDGFSKIFYSFVVLNPEDAVEIDSDSAESVFDADVISFSCPSPLTITLEWNTDASDFDMEITEPDGSI-WFAWDVGTYGFGSGDVANGFGPETWTVF----PGNSQSVGTYT--VRLYTLNAPEDTEWTLTARVKGEVAWIETGVYEPPAPGFSYSYYMDSSRQSDLFSVTLGSVD 702
            ++ G C   S      PPC  CP+G+ S  G++ C    L  +   + +  AM  DA GGFAGPG+     A      I L EED G + ++GTF R+    A+LPSST++F+Y E    P  F RG   +D STG F+  VT +P G S++  SFVV++P +A  +D+  A++ F  DV + +C   LTITLEW  + SD D+ + EP G + +F+   G  GF   D   GFGPE + +     P  SQ +G Y   V+LY+ +A  +T W LTARV GEV WIE G +              SS QSD F+V+L   D
Sbjct:  135 EVAGLCASNSFSSTGAPPCTTCPDGEVSGTGATACIRQELVGLSLPENIAAAMAADAMGGFAGPGSLTTTPAG----TIQLTEEDGGSVSLSGTFVRDDG--AALPSSTSVFIYTENTAQPDDFVRGQEALDPSTGAFSTVVTDIPAGSSRLLLSFVVVDPAEA--LDTAGADTAFALDVSNSACVPSLTITLEWTGEISDVDLYVVEPGGEVVYFSNRGGDVGFLDNDDTYGFGPENYIIDSALDPAASQVLGEYETYVKLYSGDAATET-WRLTARVSGEVVWIEEGDFI-------------SSTQSDTFAVSLSVYD 433          
BLAST of mRNA_P-canaliculata_contig10042.105.1 vs. uniprot
Match: D7G3X5_ECTSI (VWFD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3X5_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 3.660e-47
Identity = 122/305 (40.00%), Postives = 168/305 (55.08%), Query Frame = 0
Query:  407 PPCYVCPNGKTSREGSSTCFSTALRYVRASDELLEAMEGDATGGFAGPGNAEIDGAEHIWKRITLDEEDHGVLEVTGTFEREVNGDASLPSSTALFVYLEPFDGP--FFRGVGTIDSSTGVFTARVTGVPDGFSKIFYSFVVLNPEDAVEIDSDSAESVFDADVISFSCPSPLTITLEWNTDASDFDMEITEPDGSI-WFAWDVGTYGFGSGDVANGFGPETWTVF----PGNSQSVGTYT--VRLYTLNAPEDTEWTLTARVKGEVAWIETGVYEPPAPGFSYSYYMDSSRQSDLFSVTLGSVD 702
            PPC  CP+G+ S  G++ C    L  +   + +  AM  DA GGFAGPG+     A      I L EED G + ++GTF R+    A+LPSST++F+Y E    P  F RG   +D STG F+  VT +P G S++  SFVV++P +A  +D+  A++ F  DV + +C   LTITLEW  + SD D+ + EP G + +F+   G  GF   D   GFGPE + +     P  SQ +G Y   V+LY+ +A  +T W LTARV GEV WIE G +              SS QSD F+V+L   D
Sbjct:  277 PPCTTCPDGEVSGTGATACIRQELVGLSLPENIAAAMAADAMGGFAGPGSLTTTPAG----TIQLTEEDGGSVSLSGTFVRDDG--AALPSSTSVFIYTENTAQPDDFVRGQEALDPSTGAFSTVVTDIPAGSSRLLLSFVVVDPAEA--LDTAGADTAFALDVSNSACVPSLTITLEWTGETSDVDLYVVEPGGEVVYFSNRGGDVGFLDNDDTYGFGPENYIIDSALDPAASQVLGEYETYVKLYSGDAATET-WRLTARVSGEVVWIEEGDFI-------------SSTQSDTFAVSLSVYD 559          
BLAST of mRNA_P-canaliculata_contig10042.105.1 vs. uniprot
Match: A0A6H5JLL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL4_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 8.970e-27
Identity = 110/356 (30.90%), Postives = 159/356 (44.66%), Query Frame = 0
Query:  383 YSEGTCAIDLYGTCPEGSIGDNDIPPCYVCPNGKTSREGSSTCFSTALRYVRA-SDELLEAMEGDATGGFAGPGNAEIDGAE-----------HIWKRITLDEEDHGVLEVTGTFEREVNGDASLPSSTALFVYLEPFDGP--FFRGVGTIDSSTGVFTARVTGVPDGFSKIFYSFVVLNPEDAVEIDSD--SAESVFDADVISFSCPSPLTITLEWNTDASDFDMEITEPDGSIWFAWDVGTYGFGSGDVANGFG--PETWT----------VFPG----NSQSVGTYTVRLYTLNAPEDTE--WTLTARVKGEVAWIETGVYEPPAPGFSYSYYMDSSRQSDLFSVTLGSVDAD 704
            Y EG     L G C   +      PPC  CP G+ S  G+  C    +  V   S+ ++ AM  DATGGFAGPG+  IDG               W  I L + + G + V+G F R  +  A LP S+A+F Y+E  D P    RG   I  ++G F+  V  VP G S++F SFV+ +P +A+ + ++   A S+F   + + +C   LTIT EW    +    EITEPD        + T   G G+ + G G   + W           ++ G     SQ +G Y  R +    P +T   W +TARV GE+ ++                Y +   QSD+   T+   D D
Sbjct:  754 YQEG-----LGGLCTTNTFSSTGTPPCTDCPAGEVSGRGAKVCVPQGVPAVALPSEAIVAAMLADATGGFAGPGSL-IDGGVMGGFGVTEVDIQPWGEIELTDANLGSVYVSGKFVR--HDSAPLPFSSAVFFYIENADQPDDIARGSSKIRGTSGDFSMVVMDVPPGNSRLFLSFVIKDPAEALNVAAEVVPATSIFSLQISNMACVPSLTITHEW-IGGNFAPYEITEPD--------LTTIHSGHGNYSGGVGVFQDNWAGSSPAAKRYILYSGLDVDTSQVLGEYKGRKFLPILPSETPPTWRITARVSGEIVYM----------------YKEEQVQSDIVEFTVLLTDYD 1076          
BLAST of mRNA_P-canaliculata_contig10042.105.1 vs. uniprot
Match: D8LKE7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKE7_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 2.280e-19
Identity = 92/291 (31.62%), Postives = 132/291 (45.36%), Query Frame = 0
Query:  447 ATGGFAGPGNAEIDGAE-----------HIWKRITLDEEDHGVLEVTGTFEREVNGDASLPSSTALFVYLEPFDGP--FFRGVGTIDSSTGVFTARVTGVPDGFSKIFYSFVVLNPEDAVEIDSD--SAESVFDADVISFSCPSPLTITLEWNTDASDFDMEITEPDGSIWFAWDVGTYGFGSGDVANGFG--PETWT----------VFPG----NSQSVGTYTVRLYTLNAPEDTE--WTLTARVKGEVAWIETGVYEPPAPGFSYSYYMDSSRQSDLFSVTLGSVDAD 704
            ATGGFAGPG+  IDG               W  I L + + G + V+G F R  +  A+LP S+A+F Y+E  D P  F RG   I  ++G  +  VT VP G S++F SFV+ +P +A+ + ++   A S+F  D+ +  C   LTIT EW    +    EITEPD        + T     GDV+ G G   + W           ++ G     SQ +G Y  R++      +T   W  TARV GE+ ++                Y +   QSD    T+   D D
Sbjct:   10 ATGGFAGPGSL-IDGGVMGGFGVTEVDIQPWGEIELTDANLGSVYVSGKFVR--HDSAALPFSSAVFFYIENADQPDDFARGSFKIRGASGDLSMLVTDVPPGNSRLFLSFVIEDPAEALNVAAEVVPATSIFSLDISNMGCVPSLTITHEW-IGGNFAPYEITEPD--------LNTINSDHGDVSGGVGVFQDNWAGSSPAAKRYILYSGLDVDTSQVLGEYKGRMFLPFVTSETPPTWRSTARVSGEIVYM----------------YKEEQVQSDTVEFTVLLTDYD 272          
BLAST of mRNA_P-canaliculata_contig10042.105.1 vs. uniprot
Match: A0A6H5L1V3_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1V3_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 1.090e-16
Identity = 63/179 (35.20%), Postives = 96/179 (53.63%), Query Frame = 0
Query:    1 MTASTNGWDERSS-GYGCVPSSCHAGLAIDGLTDGQSRWSCKSSV-LSVDACKLTLTLDEPQDLVEMRIFLWKGKQRIRSMNIFADGALVTTVASSGKTKGFEAYELTAIQASSVMVQAVEPLPDNGWLSIIEIKLMVESDVVVEEIPAFATNDDTYIGCFADTPKNRIMSIVTTMDDL 177
            +T   + +D RS+  YGC P  C A    DG    +SRWSC+ S+  S   C +T TL++ + L ++RI L+KG  R R+++++ DG  +TT  SSG T GFE+  L        +V+ V  L D+ WLSI+E+++ V+  +V         +DDT +    D  +   M  VT   DL
Sbjct:   33 VTPEASVFDTRSTLPYGCPPDGCVAANTRDGDMSDESRWSCRPSLDASGSGCSITFTLEKVEYLGDIRIALYKGDTRTRTIDMYVDGRHITTWTSSGTTTGFESVLL---MDQGQVVELVGDLNDDEWLSILEVEIDVDDGIV---------DDDTVV--VLDVVEAAEMGTVTATADL 197          
BLAST of mRNA_P-canaliculata_contig10042.105.1 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 1.180e-15
Identity = 57/143 (39.86%), Postives = 79/143 (55.24%), Query Frame = 0
Query:    1 MTASTNGWDER-SSGYGCVPSSCHAGLAIDGLTDGQSRWSCKSSVLSVDACKLTLTLDEPQDLVEMRIFLWKGKQRIRSMNIFADGALVTTVASSGKTKGFEAYELTAIQASSVMVQAVEPLPDNGWLSIIEIKLMVESDVVV 142
            +TA++  +D R     GC P+ C A L  DG     SRWSC  S+     C ++  L    DL E+R+ L+KG  R+R++++  DG+L TT  SSG T GFE  +L+      V V  V  L D+ W+SI E  +MV SD VV
Sbjct:  194 VTATSALFDPRLGDSNGCDPAGCTAELTRDGDVSDGSRWSCAPSLGGT--CSISYDLGAVYDLSELRLALYKGTTRVRTVDVTVDGSLATTWTSSGTTDGFENVDLSGYSGQDVTVTGV--LDDSEWVSITETDIMVLSDSVV 332          
BLAST of mRNA_P-canaliculata_contig10042.105.1 vs. uniprot
Match: A0A6H5KFA6_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 1.560e-15
Identity = 56/132 (42.42%), Postives = 74/132 (56.06%), Query Frame = 0
Query:   16 GCVPSSCHAGLAIDGLTDGQSRWSCKSSVLSVDACKLTLTLDEPQDLVEMRIFLWKGKQRIRSMNIFADGALVTTVASSGKTKGFEAYELTAIQASSVMVQAVEPLPDNGWLSIIEIKLMVESDVVVEEIPA 147
            GC P+ C   L  DG     SRW+C  S+  V  C ++  L     L E+R+ L+ G  R+R++N+F DGALVTT  SSG T GFE+  L    AS  +V+    L D+ WLSIIE ++MV    VV   PA
Sbjct:  389 GCDPAGCTGALTRDGDMTDTSRWACAPSLGGV--CFISYDLGREFGLDEVRVALYNGDIRVRTINVFVDGALVTTWTSSGTTNGFESIALPDT-ASGTVVELQGVLDDSEWLSIIETEIMVWPQNVVTPPPA 517          
BLAST of mRNA_P-canaliculata_contig10042.105.1 vs. uniprot
Match: D7FL48_ECTSI (Leucine rich repeat carbohydrate binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL48_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 4.140e-15
Identity = 57/177 (32.20%), Postives = 88/177 (49.72%), Query Frame = 0
Query:   15 YGCVPSSCHAGLAIDGLTDGQSRWSCKSSVLSVDA-CKLTLTLDEPQDLVEMRIFLWKGKQRIRSMNIFADGALVTTVASSGKTKGFEAYELTAIQASSVMVQAVEPLPDNGWLSIIEIKLMVESDVVVEEIPAFATNDDTYIGCFADTPKNRIMSIVTTMDDLTPEACLKYCTEMG 190
            YGC P+ C      DG+T  +SRWSC  S+ S D+ C +T TL++ Q L  ++I L++G  R R+++I  DG    +  SSG T  FE+ +L        +V+ V  L D  WLSI+E++++V+      E+      +   +   AD   +R+   V       PE C    T  G
Sbjct:   49 YGCPPAGCVGANTRDGITSDESRWSCAPSLDSSDSGCTITYTLEDEQHLEALKIALYQGDTRTRTIDISVDGNYAFSWTSSGTTSDFESIDLGV---DGKVVELVGDLQDWEWLSILEVEILVDDGDDGSEVDVVEAGELGTVTATADLYDDRLGDTV----GCDPEGCTAALTRDG 218          
BLAST of mRNA_P-canaliculata_contig10042.105.1 vs. uniprot
Match: D7FZZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ4_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 2.210e-14
Identity = 65/189 (34.39%), Postives = 91/189 (48.15%), Query Frame = 0
Query:   16 GCVPSSCHAGLAIDGLTDGQSRWSCKSSVLSVDA-CKLTLTLDEPQDLVEMRIFLWKGKQRIRSMNIFADGALVTTVASSGKTKGFEAYELT-AIQASSVMVQAVEPLPDNGWLSIIEIKLMVESDVVVEEIPAFATNDDTYIGCFADTPKNRIMSIVTTMDDLTPEACLKYCTEMGSRFRFYALQQGN 202
            GC P+ C A L  DG T   SRWSC +++    A C ++  L     L E+R+ L+ G  R+R++++  DG LV T  SSG T GFE+      +  + + +Q V  L D+ WLSIIE ++MV    VV   P  AT         A T       I T + DL P   +   T  GS     A + G+
Sbjct:  267 GCDPAGCTAALTRDGDTGDASRWSCATNLGGEGAVCSISYDLGREFGLDELRVALYNGDIRVRTIDVSVDGVLVATWTSSGTTDGFESIAFPDGVSGTVINLQGV--LDDSEWLSIIETEIMVWPQNVVTPPPTPATTAXXXXXQPATTSP-----IPTPVGDLQPVGLIPLATGDGSLLDRCAAKDGD 448          
BLAST of mRNA_P-canaliculata_contig10042.105.1 vs. uniprot
Match: A0A6H5KH45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH45_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 7.170e-12
Identity = 52/140 (37.14%), Postives = 76/140 (54.29%), Query Frame = 0
Query:    1 MTASTNGWDER-SSGYGCVPSSCHAGLAIDG-LTDGQSRWSCKSSVLSVDA-CKLTLTLDEPQDLVEMRIFLWKGKQRIRSMNIFADGALVTTVASSGKTKGFEAYELTAIQASSVMVQAVEPLPDNGWLSIIEIKLMVE 137
            +TA    +D R S+  GC PS C A L  DG  T  +SRW+CK ++    + C++T  L     L  + I ++KG +R R++ I  D    TT  SSG T GFE  EL  +      +  V  L D+ WLSI+E+K+M++
Sbjct:   16 VTAVAELYDPRLSAESGCDPSGCVAELTRDGDATSLESRWACKPALGDAGSECRITYGLGIQYQLSSLNIAMYKGDERTRTLEISIDNLPYTTWTSSGTTTGFETIELDTMGR---WISIVGVLADSEWLSIMEVKIMID 152          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10042.105.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D7G5D6_ECTSI1.310e-5038.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3X5_ECTSI3.660e-4740.00VWFD domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JLL4_9PHAE8.970e-2730.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKE7_ECTSI2.280e-1931.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1V3_9PHAE1.090e-1635.20F5/8 type C domain-containing protein n=2 Tax=Ecto... [more]
A0A6H5KL74_9PHAE1.180e-1539.86F5/8 type C domain-containing protein n=3 Tax=Ecto... [more]
A0A6H5KFA6_9PHAE1.560e-1542.42F5/8 type C domain-containing protein n=2 Tax=Ecto... [more]
D7FL48_ECTSI4.140e-1532.20Leucine rich repeat carbohydrate binding protein n... [more]
D7FZZ4_ECTSI2.210e-1434.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KH45_9PHAE7.170e-1237.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002889Carbohydrate-binding WSCSMARTSM00321SLG_2coord: 152..252
e-value: 2.1E-6
score: 37.3
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 155..242
e-value: 3.7E-12
score: 46.3
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 152..252
score: 9.83
IPR008979Galactose-binding-like domain superfamilyGENE3D2.60.120.260coord: 3..140
e-value: 9.9E-6
score: 27.6
NoneNo IPR availablePANTHERPTHR24269FAMILY NOT NAMEDcoord: 151..268

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10042contigP-canaliculata_contig10042:2325..8690 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10042.105.1mRNA_P-canaliculata_contig10042.105.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10042 2301..8767 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10042.105.1 ID=prot_P-canaliculata_contig10042.105.1|Name=mRNA_P-canaliculata_contig10042.105.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=707bp
MTASTNGWDERSSGYGCVPSSCHAGLAIDGLTDGQSRWSCKSSVLSVDAC
KLTLTLDEPQDLVEMRIFLWKGKQRIRSMNIFADGALVTTVASSGKTKGF
EAYELTAIQASSVMVQAVEPLPDNGWLSIIEIKLMVESDVVVEEIPAFAT
NDDTYIGCFADTPKNRIMSIVTTMDDLTPEACLKYCTEMGSRFRFYALQQ
GNECWCSGCNLTDNDRNTAYDRHGAGICTAACTGDSSMACGGDMAFSLYR
LGSCGCPDDSVPSSLEISLVWTQDADLDLHVIEPGGQEVYYSQRLGEVGT
MSDDNVDGPGSETYTLLNGLNIDDDDVLGTYRAYVTNGGEGTPWALTARL
AGELEWAVSSFAPSQEYLNDDEPTSYSVTVVEYSEGTCAIDLYGTCPEGS
IGDNDIPPCYVCPNGKTSREGSSTCFSTALRYVRASDELLEAMEGDATGG
FAGPGNAEIDGAEHIWKRITLDEEDHGVLEVTGTFEREVNGDASLPSSTA
LFVYLEPFDGPFFRGVGTIDSSTGVFTARVTGVPDGFSKIFYSFVVLNPE
DAVEIDSDSAESVFDADVISFSCPSPLTITLEWNTDASDFDMEITEPDGS
IWFAWDVGTYGFGSGDVANGFGPETWTVFPGNSQSVGTYTVRLYTLNAPE
DTEWTLTARVKGEVAWIETGVYEPPAPGFSYSYYMDSSRQSDLFSVTLGS
VDADHC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd
IPR008979Galactose-bd-like_sf