prot_P-canaliculata_contig100356.95.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig100356.95.1
Unique Nameprot_P-canaliculata_contig100356.95.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length64
Homology
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BLAST of mRNA_P-canaliculata_contig100356.95.1 vs. uniprot
Match: UPI0016765D31 ((2Fe-2S)-binding protein n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI0016765D31)

HSP 1 Score: 109 bits (272), Expect = 3.690e-30
Identity = 52/63 (82.54%), Postives = 57/63 (90.48%), Query Frame = 0 
Query:    1 MIHCICNNINTAKVDAAAANGAETAACVQRACGTRFNCGQCRVDIQSRLQAWRIANPALEAAE 63
            MIHCICNNINTAKVDAAAA GAETAACVQ+ACGTRFNCGQCRVDI +RL++ R  NP L+AAE
Sbjct:    1 MIHCICNNINTAKVDAAAAQGAETAACVQKACGTRFNCGQCRVDIDARLRSLRALNPILQAAE 63
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BLAST of mRNA_P-canaliculata_contig100356.95.1 vs. uniprot
Match: UPI00167B3EB6 ((2Fe-2S)-binding protein n=1 Tax=Algimonas arctica TaxID=1479486 RepID=UPI00167B3EB6)

HSP 1 Score: 100 bits (248), Expect = 1.700e-26
Identity = 46/63 (73.02%), Postives = 52/63 (82.54%), Query Frame = 0 
Query:    1 MIHCICNNINTAKVDAAAANGAETAACVQRACGTRFNCGQCRVDIQSRLQAWRIANPALEAAE 63
            MIHCICNNINT  V+AAAA GAETAACVQRACG+RF CGQCR DI+  L++WR   P L+AAE
Sbjct:    1 MIHCICNNINTKAVEAAAAKGAETAACVQRACGSRFRCGQCRTDIEQHLRSWRQTRPMLDAAE 63
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BLAST of mRNA_P-canaliculata_contig100356.95.1 vs. uniprot
Match: UPI00041620B7 ((2Fe-2S)-binding protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI00041620B7)

HSP 1 Score: 98.6 bits (244), Expect = 1.230e-25
Identity = 46/63 (73.02%), Postives = 51/63 (80.95%), Query Frame = 0 
Query:    1 MIHCICNNINTAKVDAAAANGAETAACVQRACGTRFNCGQCRVDIQSRLQAWRIANPALEAAE 63
            MIHC+CNNINTAKVD AA+ GAE A  V R CGT+FNCGQCRV I +RL+ WR  NPALEAAE
Sbjct:   22 MIHCLCNNINTAKVDIAASQGAERAKDVMRVCGTKFNCGQCRVSINARLEEWRAINPALEAAE 84
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BLAST of mRNA_P-canaliculata_contig100356.95.1 vs. uniprot
Match: A0A520XME1_9ACTN ((2Fe-2S)-binding protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520XME1_9ACTN)

HSP 1 Score: 60.1 bits (144), Expect = 1.200e-10
Identity = 35/63 (55.56%), Postives = 39/63 (61.90%), Query Frame = 0 
Query:    1 MIHCICNNINTAKVDAAAANGAETAACVQRACGTRFNCGQCRVDIQSRLQAWRIANPALEAAE 63
            MIHC+CN INT KVD AAA GA    CVQ   G +FNCG+C   I+ RL A       LEAAE
Sbjct:    1 MIHCLCNQINTKKVDEAAACGARRPKCVQAHFGHKFNCGKCAQSIRERL-AEISGVDYLEAAE 62
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BLAST of mRNA_P-canaliculata_contig100356.95.1 vs. uniprot
Match: UPI0018F02B14 (hypothetical protein n=1 Tax=Robiginitomaculum antarcticum TaxID=437507 RepID=UPI0018F02B14)

HSP 1 Score: 53.5 bits (127), Expect = 6.040e-8
Identity = 29/49 (59.18%), Postives = 31/49 (63.27%), Query Frame = 0 
Query:    1 MIHCICNNINTAKVDAAAANGAETAACVQRACGTRFNCGQCRVDIQSRL 49
            MIHC+CNNINTAKVD AA  GA     V    G  FNCGQC+  I  RL
Sbjct:    1 MIHCVCNNINTAKVDEAAHAGACRPKDVLAHHGKAFNCGQCKGSIAERL 49
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100356.95.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
UPI0016765D313.690e-3082.54(2Fe-2S)-binding protein n=1 Tax=Litorimonas clado... [more]
UPI00167B3EB61.700e-2673.02(2Fe-2S)-binding protein n=1 Tax=Algimonas arctica... [more]
UPI00041620B71.230e-2573.02(2Fe-2S)-binding protein n=1 Tax=Hellea balneolens... [more]
A0A520XME1_9ACTN1.200e-1055.56(2Fe-2S)-binding protein n=1 Tax=Acidimicrobiales ... [more]
UPI0018F02B146.040e-859.18hypothetical protein n=1 Tax=Robiginitomaculum ant... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041854BFD-like [2Fe-2S]-binding domain superfamilyGENE3D1.10.10.1100coord: 1..53
e-value: 1.5E-9
score: 39.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig100356contigP-canaliculata_contig100356:564..755 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig100356.95.1mRNA_P-canaliculata_contig100356.95.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig100356 564..755 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig100356.95.1 ID=prot_P-canaliculata_contig100356.95.1|Name=mRNA_P-canaliculata_contig100356.95.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=64bp
MIHCICNNINTAKVDAAAANGAETAACVQRACGTRFNCGQCRVDIQSRLQ
AWRIANPALEAAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041854BFD-like_2Fe2S-bd_dom_sf