prot_P-canaliculata_contig10033.91.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10033.91.1
Unique Nameprot_P-canaliculata_contig10033.91.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length694
Homology
BLAST of mRNA_P-canaliculata_contig10033.91.1 vs. uniprot
Match: A0A6H5KHY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHY3_9PHAE)

HSP 1 Score: 405 bits (1040), Expect = 5.000e-130
Identity = 278/588 (47.28%), Postives = 335/588 (56.97%), Query Frame = 0
Query:  147 YDEVVLTTDWEADDFLSACVIFAVFTAEARRAHADGGGNERPYPLRTVIVGEGNSFEKACRVREALAAMRREGVVPPGCSIEVLEGSPTLPPSCEWKSSRPAARRTQAGRRGGGEDEEHGVRFWEPFFGSFAVVLRGAVIAMLRRGWRRPWNREAGLARKRLRELLVVARRQRKRALVIALKPPRDLIEVFLDRDRVEW------RGQGDEKKQEFDHVDLLVSGAFGGVFVGSGEG---------EKSLFQPRPTGQGVDGLEAVLSTGDVVEVMGKVNRVFVVQLDDLVGSYNFPRAISPDRTPVLAAAVAGARGALPSALRRVVAASNKRALMGFPDKVAAVISAGRYANEDLQSKAETIAAAAAAP----AAARLAELGACMADLIATDFEALDTAGLSPGIHQAMFRSLDVRVSLSNAAAAWALACPDAVCWERFPFVGLDPPSGRVVPLEAKGPGGHK---------RRGELISSCDICEVRRGYNRESRTATVSEVRSS---RSNGKLTACVGNSGFREGGGGVAVV----------GTAGVAASAFFATGFARWFERLEDQEAGYMEFVGFLVRVLDQMP 693
            YD+VVLTT+WEAD  L+AC++F+V TAE +RA     G +RPYPLR +IVGEG    KA + REAL AMRR  ++PP C ++VLE            +++   R+   G     E+E  G   W  F GS +V+L      +LR   R  + R  GLAR +LRE+    R+  +R LVIALKPPRDL+EV L+  R  W      RG G      + H+D+ VSG F G F G  EG          +     RP+  G    +  LS  DV E + +VNRV VVQL+DLV  Y FP AI+PDRTP LAAAVAGARG LPS LRR +AASN  AL  FPDKVA+ I AGRYANE+L+  A +IAAAA A        R+AELGACMADLIA+DFEAL+ AGLSPG  QA+FRSLDV ++LS+ AAAWAL   DAVCWE  P VGL    GR++ L   G G  +         RRG   SS    E   G  R      +SE R     R+ GK     G  G RE                  G  G     F ATGFA  FERLEDQEAGY  F  F+VRVLDQMP
Sbjct:    3 YDQVVLTTEWEADGLLAACLLFSVVTAETKRAPFASDGTKRPYPLRNLIVGEG----KANQAREALEAMRRTNLIPPDCRVDVLEAGEG--------AAKGEKRQEDRGIEAEEEEEGGGDGVWRSFLGSCSVLL------LLRSTLRWLFGRRRGLARTKLREVFNATRKDNQRVLVIALKPPRDLVEVLLESGRASWWGRAMGRGGGRRGCSRYKHIDMFVSGGFSGAFRGQREGGECSAPGHSPREQRHRRPSAGG----DEELSRDDVEEALARVNRVLVVQLEDLVRPYGFPTAIAPDRTPTLAAAVAGARGVLPSCLRREIAASNHLALTEFPDKVASAIEAGRYANEELRVTASSIAAAAVAEEPGMGRGRVAELGACMADLIASDFEALEMAGLSPGTQQAVFRSLDVGMALSDVAAAWALVRQDAVCWESCPGVGLGHSGGRLISL---GDGARREETEDSRSGRRGRRNSSSGSVEGPAGRPRGD-DGDISEDRGDSRRRTRGKKGDSRG--GKREXXXXXXXXXKILVHRTGDGMCGSCVGGFLATGFADGFERLEDQEAGYGAFAVFIVRVLDQMP 562          
BLAST of mRNA_P-canaliculata_contig10033.91.1 vs. uniprot
Match: D8LJK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK4_ECTSI)

HSP 1 Score: 382 bits (982), Expect = 3.500e-120
Identity = 301/758 (39.71%), Postives = 363/758 (47.89%), Query Frame = 0
Query:    1 ILETCLVLSIGILSRFWLPRPLVEARYSLASWRRRV--LASGQDDGDSSDQVPTRTVLIHTRSGSWGVNGIVLSQPPFLPYRFPQGRDVNATAGAED-LPDLAGRYLDLIAQAQAQGRSAASNG-APPLQRGPLARGCCGRPRA-FVDASAYDEVVLTTDWEADDFLSACVIFAVFTAEARRAHADGGGNERPYPLRTVIVGEGNSFEKACRVREALAAMRREGVVPPGCSIEVLEGSPTLPPSCEWKSSRPAARRTQAGRRGGGEDEEHGVRF------------------WEPFFGSFAVVLRGAVIAMLRRGWRRPWNREAGLARKRLRELLVVARRQRKRALVIALKPPRDLIEVFLDRDRVEWRGQGDEKKQEFDHVDLLVSGAFGGVFVGSGEGEKSLFQPRPTGQGVDGLEAVLSTGDVVEVMGKVNRVFVVQLDDLVGSYNFPRAISPDRTPVLAAAVAGARGALPSALRRVVAASNKRALMGFPDKVAAVISAGRYANEDLQSKAETIAAAAAAP----AAARLAELGACMADLIATDFEALDTAGLSPGIHQAMFRSLDVRVSLSNAAAAWALACPDAVCWERFPFVGLDPPSGRVVPL------EAKGPGGHKRRGELISSCDICEVRRGYNRESRTATVSE--------------------------------VRSSRSNGKLTACVGNSGFREGGGGVAVVGTAGVAASAFFATGFARWFERLEDQEAGYMEFVGFLVRVLDQMP 693
            +LE  LVL IG+LS FWLP PL   R ++   RRR+  L   ++ G   D V   +  I    G    NG V  Q          G+D  + A A D  PDL  RYLD +AQA  Q  SAA+   A P +R  L R   G P   FVD SAYDEVVLTT+WEAD  L+AC++F+V TAE +RA     G +RPYPLRT+IVGEG    KA + REAL AMRR  +VPP C ++VLE                     +   +G    E+ G+                    W  F GS +++L      +LR   R    R  GLA                                         RGQG+                 G     SG   +  +  RP+  G    +  LS  DV E + +VNRV VVQL+DLV  Y FPRAI+PDRTP LAAAVAGARG LPS LRR +AASN  AL  FPDKVA+ I AGRYANE+L+  A +IAAAA A        R+AELGACMADLIA+DFEAL+ AGLSPG  QA+FRSLDV ++LS+ AAAWAL   DAVCWE  P VGLD  +GR++ L      E  G     RR       D  E   G         V +                                V     +G   +CVG                       F ATGFA  FE+LEDQEAGY  F  F+VRVLDQMP
Sbjct:   12 VLEGVLVLLIGVLSTFWLPLPLYRLREAVTCRRRRLRLLRQSEESGGKVD-VGADSKAIRPVGGRGAGNGGVDGQTTEGAAESLTGQDPKSAAAASDGFPDLGRRYLDFLAQALGQSHSAAAAAIAAPDRRTGLPRNGGGHPEGCFVDVSAYDEVVLTTEWEADGLLAACLLFSVVTAETKRAPFASDGTKRPYPLRTLIVGEG----KASQAREALEAMRRTKLVPPDCRVDVLEPG-------------------EGAAKGEKRREDRGIEXXXXXXXXXXXXXXXXDGVWRSFLGSCSMLL-----LLLRSTLRWLSGRRRGLA-----------------------------------------RGQGE-----------------GXXXXXSGHSLRRQWHRRPSAGG----DEELSREDVEEALARVNRVLVVQLEDLVRPYGFPRAIAPDRTPTLAAAVAGARGVLPSCLRREIAASNHLALTEFPDKVASAIKAGRYANEELRVTASSIAAAAVAEEPGMGRGRVAELGACMADLIASDFEALEMAGLSPGTQQAVFRSLDVGMALSDVAAAWALVRQDAVCWESCPRVGLDHSAGRLISLGDGARGEETGENSSGRRXXXXXXXDSIEGSAGRAXXXXXDIVEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIVVRRTGDGLCGSCVGG----------------------FLATGFADGFEKLEDQEAGYGAFAVFIVRVLDQMP 656          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10033.91.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KHY3_9PHAE5.000e-13047.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJK4_ECTSI3.500e-12039.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..268
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 269..289
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 290..693

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10033contigP-canaliculata_contig10033:1200..9749 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10033.91.1mRNA_P-canaliculata_contig10033.91.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10033 1200..9749 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10033.91.1 ID=prot_P-canaliculata_contig10033.91.1|Name=mRNA_P-canaliculata_contig10033.91.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=694bp
ILETCLVLSIGILSRFWLPRPLVEARYSLASWRRRVLASGQDDGDSSDQV
PTRTVLIHTRSGSWGVNGIVLSQPPFLPYRFPQGRDVNATAGAEDLPDLA
GRYLDLIAQAQAQGRSAASNGAPPLQRGPLARGCCGRPRAFVDASAYDEV
VLTTDWEADDFLSACVIFAVFTAEARRAHADGGGNERPYPLRTVIVGEGN
SFEKACRVREALAAMRREGVVPPGCSIEVLEGSPTLPPSCEWKSSRPAAR
RTQAGRRGGGEDEEHGVRFWEPFFGSFAVVLRGAVIAMLRRGWRRPWNRE
AGLARKRLRELLVVARRQRKRALVIALKPPRDLIEVFLDRDRVEWRGQGD
EKKQEFDHVDLLVSGAFGGVFVGSGEGEKSLFQPRPTGQGVDGLEAVLST
GDVVEVMGKVNRVFVVQLDDLVGSYNFPRAISPDRTPVLAAAVAGARGAL
PSALRRVVAASNKRALMGFPDKVAAVISAGRYANEDLQSKAETIAAAAAA
PAAARLAELGACMADLIATDFEALDTAGLSPGIHQAMFRSLDVRVSLSNA
AAAWALACPDAVCWERFPFVGLDPPSGRVVPLEAKGPGGHKRRGELISSC
DICEVRRGYNRESRTATVSEVRSSRSNGKLTACVGNSGFREGGGGVAVVG
TAGVAASAFFATGFARWFERLEDQEAGYMEFVGFLVRVLDQMP*
back to top