prot_P-canaliculata_contig10672.896.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10672.896.1
Unique Nameprot_P-canaliculata_contig10672.896.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length320
Homology
BLAST of mRNA_P-canaliculata_contig10672.896.1 vs. uniprot
Match: D7FI26_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI26_ECTSI)

HSP 1 Score: 295 bits (756), Expect = 6.540e-95
Identity = 152/202 (75.25%), Postives = 168/202 (83.17%), Query Frame = 0
Query:   93 GERGE--GARVVSPAPCGAAELWATFCKVRADLVTPLERDRPWISDENVARVEGFGSHTLSKLVGFIKASLPDWKKKIQNRNIKAPRRSPSVVIVCSGARRCVEVMKHLTAFRCQVVKLFAKHLKLEEQKVMLKKGFFPLAVGTPGRVRALAASGSLRLDECTLLILDAEKNVKGRNVLDMDGVAADTMALLADHVRPCLAS 292
            GERG    A V +     A ELWA FCKVR DLVTPLE D PWI+  ++ARVEGFG+HT  KLVGFIKASLPDWKK+IQNRN  APR SPSV+IVC+GARRCVEVMKHLTAFRCQVVKLFAKHLK+EEQKVML+KG FPL VGTPGR+RALAA+GSLRLD   L+ILD EKNVKGR+VLDMDGV+ DTMA L+D VRP L S
Sbjct:  150 GERGAKTAAAVTNTVEEEAEELWARFCKVRGDLVTPLELDFPWITAGSLARVEGFGAHTAMKLVGFIKASLPDWKKRIQNRNSNAPRGSPSVLIVCTGARRCVEVMKHLTAFRCQVVKLFAKHLKIEEQKVMLRKGCFPLGVGTPGRMRALAAAGSLRLDSSALVILDLEKNVKGRSVLDMDGVSGDTMAFLSDCVRPHLVS 351          
BLAST of mRNA_P-canaliculata_contig10672.896.1 vs. uniprot
Match: A0A835YSW0_9STRA (U3-containing 90S pre-ribosomal complex subunit-domain containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSW0_9STRA)

HSP 1 Score: 171 bits (433), Expect = 3.850e-47
Identity = 109/266 (40.98%), Postives = 145/266 (54.51%), Query Frame = 0
Query:   61 FKALKAKVKEKKQRRIEAESKGGITGEHGEGAGERGEGARVVSPAPCGAAELWATFCKVRADLVTPLERDRPWISDENVARVEGFGSHTLSKLVGFIKASLPDWKK---------------------KIQNRNIKAPRR---SPSVVIVCSGARRCVEVMKHLTAFRCQVVKLFAKHLKLEEQKVMLKKGFFPLAVGTPGRVRALAASGSLRLDECTLLILDAEKNVKGRNVLDMDGVAADTMALLADHVRPCLASSSRSGVSKVG 302
             K LK K + K+Q     +S  G           RG        A   A  +W   C V    +  +E   PW+  E++A +E FG+HT++KL G+IKA+LP+W+                      K +    K P     SP +VIVCSGARRC+EV+K L+ FRCQV+KLFAKHLK  EQ  ML++ +FP+AVGTPGRV  LAA G++ L    LL+LDA ++ KGR+VLDM G   D   LL  HVRP L S+   G  ++G
Sbjct:   90 LKELKLKTQAKRQEASAEQSSNG-----------RGSSDASALTAQQAADAVWERCCAVLGPQLAEIELLTPWVEAEDMAVLEQFGAHTIAKLPGYIKATLPNWRALTAAAPAKDRGSGGAVKWGAGKPRGGGAKPPAPGAGSPPIVIVCSGARRCMEVIKALSPFRCQVLKLFAKHLKPAEQAKMLRR-YFPIAVGTPGRVLKLAAEGAVALGGTQLLLLDAARDAKGRSVLDMAGAREDLCELLRAHVRPHLRSAPGPGALQLG 343          
BLAST of mRNA_P-canaliculata_contig10672.896.1 vs. uniprot
Match: A0A6A3I4I1_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3I4I1_9STRA)

HSP 1 Score: 124 bits (311), Expect = 7.650e-30
Identity = 70/175 (40.00%), Postives = 100/175 (57.14%), Query Frame = 0
Query:  116 FCKVRADLVTPLERDRPWISDENVARVEGFGSHTLSKLVGFIKASLPDWKKKIQNRNIKAPRRSPSVVIVCSGARRCVEVMKHLTAFRCQVVKLFAKHLKLEEQKVMLKKGFFPLAVGTPGRVRALAASGSLRLDECTLLILDAEKNVKGRNVLDMDGVAADTMALLADHVRPCL 290
            + K R   +T LE     +++ +    +G G H L +L  +I   LP +KK    +  K   +SP  +I+CS A RCV+V+KHLT F+C+V KLFAKHLK++EQ   L   + P+AVGTP RV+ L   G+L L   T +I D EK+ K   VL++   A + M LL  +  P L
Sbjct:  102 YTKHRGGQMTSLEL-ADGLTETHFVAPKGLGKHRLDRLPAYIHQLLPSFKKDFVGKG-KRRDKSPYFLILCSSALRCVDVIKHLTPFKCRVAKLFAKHLKVDEQAKQLANMYLPIAVGTPARVKKLLEMGALSLKHTTHVIFDMEKDKKQLTVLELKDTATEMMDLLQFYFTPLL 274          
BLAST of mRNA_P-canaliculata_contig10672.896.1 vs. uniprot
Match: A0A7S3XUU3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUU3_HETAK)

HSP 1 Score: 121 bits (303), Expect = 1.780e-29
Identity = 81/186 (43.55%), Postives = 106/186 (56.99%), Query Frame = 0
Query:  108 GAAELWATFCKVRADLVTPLERDRPWISDENVARVEGFGSHTLSK---LVGFIKASLPDWKKKIQ-----NRNIK----AP--RRSPSVVIVCSGARRCVEVMKHLTAFRCQVVKLFAKHLKLEEQKVMLKKGFFPLAVGTPGRVRALAASGSLRLDECTLLILDAEKNVKGRNVLDMDGVAADTM 279
            G A  WA +  V    +T LE     +  ENV   EG      +    LV F+KA +P WK K+Q     NR       AP  R SP V++VC+GARRCV ++K L  FRC V KLFAKH+K++EQ+ +LKK   P+AVGTP R+  LA  G L L+   L+I D  K+VK   +LD++GV  D M
Sbjct:    7 GRALFWAKYVGVMGGKLTDLE-----LRPENVP--EGAFLPVAAPPEPLVDFVKAHVPGWKVKLQLAKGQNRKFARAAAAPQARGSPRVLVVCAGARRCVALLKGLAVFRCPVAKLFAKHMKIQEQQKLLKK-CAPIAVGTPSRLLKLAQFGDLCLESTELIIFDMGKDVKQMTILDVNGVKEDLM 184          
BLAST of mRNA_P-canaliculata_contig10672.896.1 vs. uniprot
Match: A0A2D4C5F1_PYTIN (Ubiquitin-specific protease, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5F1_PYTIN)

HSP 1 Score: 123 bits (309), Expect = 2.150e-29
Identity = 67/175 (38.29%), Postives = 103/175 (58.86%), Query Frame = 0
Query:  116 FCKVRADLVTPLERDRPWISDENVARVEGFGSHTLSKLVGFIKASLPDWKKKIQNRNIKAPRRSPSVVIVCSGARRCVEVMKHLTAFRCQVVKLFAKHLKLEEQKVMLKKGFFPLAVGTPGRVRALAASGSLRLDECTLLILDAEKNVKGRNVLDMDGVAADTMALLADHVRPCL 290
            + K R   +T LE     +++ +    +G G HTL  L  +++  +P WK   + + IK  + SP  +IVCS A R VEV+KHL++FRC+V KLFA+H+K +EQ+  L   F P+AVGTP R++ L    ++ L   + +ILD  K+ K   +LD+   + DTM LL  ++ P L
Sbjct:  121 YIKHRGGQLTTLEIAEG-LTEHHFVAPKGLGKHTLQSLPLYMRHCVPTWKHDFRGKKIKYDK-SPIFLIVCSSALRAVEVLKHLSSFRCKVAKLFARHMKAKEQEDQLTLHFHPIAVGTPARLKKLLEMDAMSLQHTSHVILDMAKDKKNMTILDLKDTSKDTMELLQFYLLPRL 293          
BLAST of mRNA_P-canaliculata_contig10672.896.1 vs. uniprot
Match: A0A067BQF7_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BQF7_SAPPC)

HSP 1 Score: 122 bits (305), Expect = 4.250e-29
Identity = 66/176 (37.50%), Postives = 107/176 (60.80%), Query Frame = 0
Query:  116 FCKVRADLVTPLERDRPWISDENVARVEGFGSHTLSKLVGFIKASLPDWKKKIQNRNIKAPRRSPSVVIVCSGARRCVEVMKHLTAFRCQVVKLFAKHLKLEEQKVMLKKGFFPLAVGTPGRVRALAASGSLRLDECTLLILDAEKNVKGRNVLDMDGVAADTMALLADHVRPCLA 291
            + K   D +TP E     +++ +   ++ FG HTL     F++A  P+WK   + + IK  +RSP ++IVCS A R VE+ K + +F+C V KLFAKHLKLEEQ  MLK+ F P+A+GTPGR++ L    +L L+  + ++LD   + K  ++L++   + DT+  + + + P +A
Sbjct:   92 YMKHYGDSLTPAEI-ADGLTESHFTVLKQFGKHTLESYTRFLRALCPEWKFLFRGKGIK-DKRSPLLLIVCSSALRAVEIGKAIASFKCHVAKLFAKHLKLEEQVEMLKR-FHPIAIGTPGRIKTLLEMKALSLECTSHVVLDMHLDSKNMSLLELKDTSKDTIDCIRESLLPRIA 264          
BLAST of mRNA_P-canaliculata_contig10672.896.1 vs. uniprot
Match: A0A662X8K2_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X8K2_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.910e-28
Identity = 65/170 (38.24%), Postives = 98/170 (57.65%), Query Frame = 0
Query:  121 ADLVTPLERDRPWISDENVARVEGFGSHTLSKLVGFIKASLPDWKKKIQNRNIKAPRRSPSVVIVCSGARRCVEVMKHLTAFRCQVVKLFAKHLKLEEQKVMLKKGFFPLAVGTPGRVRALAASGSLRLDECTLLILDAEKNVKGRNVLDMDGVAADTMALLADHVRPCL 290
            AD +    RD    +  + A  +G G H L  L  +I   +P WK++   +  K   +SP  +++CS A RCVEV+KH+ +F+C+V KLFAKH+K+ EQ   L + FFP+AVGTP RV+ L  + +L L   T +I D EK+ K   ++++   A + M LL  +  P L
Sbjct:  168 ADALNGALRDLACSAKTHFASPKGLGKHKLELLPAYIHHFMPKWKREFAGKG-KRLDKSPYFLVLCSSALRCVEVLKHVASFKCRVGKLFAKHMKVSEQGEQLSRIFFPIAVGTPARVKKLLETDALSLKHTTHVIFDMEKDKKQLTIMELKDTATEVMDLLQFYFIPQL 336          
BLAST of mRNA_P-canaliculata_contig10672.896.1 vs. uniprot
Match: A0A024UIX1_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UIX1_9STRA)

HSP 1 Score: 120 bits (300), Expect = 3.010e-28
Identity = 67/176 (38.07%), Postives = 101/176 (57.39%), Query Frame = 0
Query:  116 FCKVRADLVTPLERDRPWISDENVARVEGFGSHTLSKLVGFIKASLPDWKKKIQNRNIKAPRRSPSVVIVCSGARRCVEVMKHLTAFRCQVVKLFAKHLKLEEQKVMLKKGFFPLAVGTPGRVRALAASGSLRLDECTLLILDAEKNVKGRNVLDMDGVAADTMALLADHVRPCLA 291
            + K+  D +TP+E     +++ +   V  FG H L  L  F+++  P WK   + + IK    SP +VI+CS A R VEV K +  F C V KLF KH KL EQ  MLK+ F P+A+GTPGR++AL     L L   T +++D  ++ K  ++L++   A DT+ ++ DH+   LA
Sbjct:  105 YSKLYGDKLTPVEIANG-LTEAHFTVVPQFGKHNLDSLSRFLRSICPKWKLLFKGKGIKGDC-SPILVILCSSALRAVEVGKAIAVFHCHVAKLFGKHFKLTEQVEMLKR-FHPIAIGTPGRIKALLEMKGLSLKHTTHVVVDMHRDSKQMSILELKDTAKDTIDIIRDHMLVPLA 277          
BLAST of mRNA_P-canaliculata_contig10672.896.1 vs. uniprot
Match: A0A8K1CKQ2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKQ2_PYTOL)

HSP 1 Score: 119 bits (298), Expect = 6.510e-28
Identity = 63/175 (36.00%), Postives = 101/175 (57.71%), Query Frame = 0
Query:  116 FCKVRADLVTPLERDRPWISDENVARVEGFGSHTLSKLVGFIKASLPDWKKKIQNRNIKAPRRSPSVVIVCSGARRCVEVMKHLTAFRCQVVKLFAKHLKLEEQKVMLKKGFFPLAVGTPGRVRALAASGSLRLDECTLLILDAEKNVKGRNVLDMDGVAADTMALLADHVRPCL 290
            + K R   +T LE     +++ +     G G HTL  L  +++   P WK   + +  K  + S   +++CS A R VEV+KH  +F+C+V KLFAKH+K+E+Q++ L K F P++VGTPGR++ L    +L L+  T + +D EK+ K   +L++   A + M LL  H+ P L
Sbjct:  109 YIKQRGGQMTTLELAEG-LAESHFVAPAGLGKHTLPNLSLYMRHLRPAWKVDFKGKGKKYDK-STYFLVICSSALRAVEVLKHFGSFKCKVAKLFAKHMKVEDQEIQLAKTFNPISVGTPGRIKKLLEINALSLEHTTHVFIDMEKDKKAMTLLELKDTAKEMMELLQFHLLPQL 281          
BLAST of mRNA_P-canaliculata_contig10672.896.1 vs. uniprot
Match: A0A3M6VRI3_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRI3_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.070e-27
Identity = 67/175 (38.29%), Postives = 97/175 (55.43%), Query Frame = 0
Query:  116 FCKVRADLVTPLERDRPWISDENVARVEGFGSHTLSKLVGFIKASLPDWKKKIQNRNIKAPRRSPSVVIVCSGARRCVEVMKHLTAFRCQVVKLFAKHLKLEEQKVMLKKGFFPLAVGTPGRVRALAASGSLRLDECTLLILDAEKNVKGRNVLDMDGVAADTMALLADHVRPCL 290
            + K R   +T LE     +++ +     G G H L  L  +I   LP +K+    + ++  + SP  +I+CS A RCVE++KHLT+F+C+V KLF KHLK + Q   L   +FP+AVGTP RV+ L   G+L +     LI D EK+ K   +LD+   A + M LL  H  P L
Sbjct:   99 YMKHRGGQMTSLEL-ADGLNESHFLVPAGLGKHKLELLPSYIHHLLPTYKRDFLGKGMRRDK-SPVFLILCSSALRCVELIKHLTSFKCRVAKLFGKHLKADTQAKQLTDNYFPIAVGTPARVKKLMEMGALSMKFTKRLIFDMEKDKKQLTLLDLKDTATEMMDLLQFHFLPQL 271          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10672.896.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI26_ECTSI6.540e-9575.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YSW0_9STRA3.850e-4740.98U3-containing 90S pre-ribosomal complex subunit-do... [more]
A0A6A3I4I1_9STRA7.650e-3040.00Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A7S3XUU3_HETAK1.780e-2943.55Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2D4C5F1_PYTIN2.150e-2938.29Ubiquitin-specific protease, putative n=1 Tax=Pyth... [more]
A0A067BQF7_SAPPC4.250e-2937.50Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A662X8K2_9STRA1.910e-2838.24Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A024UIX1_9STRA3.010e-2838.07Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A8K1CKQ2_PYTOL6.510e-2836.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3M6VRI3_9STRA1.070e-2738.29Uncharacterized protein n=1 Tax=Peronospora effusa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 51..81
NoneNo IPR availableGENE3D3.40.50.300coord: 152..272
e-value: 1.1E-6
score: 30.0
IPR032704Protein Cms1PFAMPF14617CMS1coord: 57..283
e-value: 2.5E-22
score: 79.4
IPR032704Protein Cms1PANTHERPTHR24030FAMILY NOT NAMEDcoord: 43..294
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 178..260

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10672contigP-canaliculata_contig10672:1834..6501 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10672.896.1mRNA_P-canaliculata_contig10672.896.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10672 1188..6630 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10672.896.1 ID=prot_P-canaliculata_contig10672.896.1|Name=mRNA_P-canaliculata_contig10672.896.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=320bp
MAGTKRGRPRLSAEGFEEGSSDGGSDSPGEVGGGVDEGSTLKEEMEEEAR
KRRIEKKKEKFKALKAKVKEKKQRRIEAESKGGITGEHGEGAGERGEGAR
VVSPAPCGAAELWATFCKVRADLVTPLERDRPWISDENVARVEGFGSHTL
SKLVGFIKASLPDWKKKIQNRNIKAPRRSPSVVIVCSGARRCVEVMKHLT
AFRCQVVKLFAKHLKLEEQKVMLKKGFFPLAVGTPGRVRALAASGSLRLD
ECTLLILDAEKNVKGRNVLDMDGVAADTMALLADHVRPCLASSSRSGVSK
VGGGGGEKGTGSSLRIALY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032704Cms1
IPR027417P-loop_NTPase