mRNA_P-canaliculata_contig1003.86.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig1003.86.1
Unique NamemRNA_P-canaliculata_contig1003.86.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig1003.86.1 vs. uniprot
Match: D7FJJ6_ECTSI (Solute carrier family 35 member 3A, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJJ6_ECTSI)

HSP 1 Score: 407 bits (1046), Expect = 1.220e-138
Identity = 215/328 (65.55%), Postives = 260/328 (79.27%), Query Frame = 2
Query:  161 MSWFAGNAKHLSLGLLVLQNTSLVLLMRYSLTNEGPRYVKSTAVAMMEMLKLTVCFLVLYMESGESKAFFKKLRLEVAWKPLEMAKLMVPALLYTVQNNLLYIALQHLDPATYSVCYQTKILTTALFSVVLLGKRLSLLKWSSLVLLMVGVALAELSNDHTSRTK--KAAVVQVPMLGFWCVVAAACTSGFAGVYFEMLLKGSKTSLWVRNIQMGLSSIVLAFAGVFLNDWEEVRSNGFFYGYNGAVVGVVLLQAGGGLVVAVVVKYTDNIRKSFAAAVSIVMSCIMSMFLFDFKPNLLFVIGSSLVCTSVFMYSRPSETIGLPTYHK 1138
            MSW   N K LSLG LV QN +LVL MRYSLT +GPRY+ STAVA+MEMLKL VCF V+Y+ESGE + F KKLR+EVA KP EMAKLM+PA+LYT+QNN+LY+AL++LD ATYSVCYQTKILTTALFSV+LL ++LS  KW +LVLL VGVALA+LS+  T+  K  +++  Q P++GF CV+ AACTSGFAGVYFEMLLKGSKTSLW+RNIQMG+ SIVLAF  V + DW  V SNGFF+GY   V  V++LQA GGLVVAVVVKY DNIRKSFA A+SI++SC +S   F FKP  LF IGS++V  SVF+Y++      LP ++K
Sbjct:    1 MSWLIRNVKTLSLGCLVAQNCALVLTMRYSLTVQGPRYISSTAVALMEMLKLAVCFAVVYLESGELRTFSKKLRVEVAGKPREMAKLMIPAMLYTLQNNMLYMALENLDAATYSVCYQTKILTTALFSVILLRRKLSATKWGALVLLAVGVALAQLSSQSTNSPKADESSRGQSPVVGFLCVMGAACTSGFAGVYFEMLLKGSKTSLWIRNIQMGIPSIVLAFGSVIVKDWRAVTSNGFFFGYGWVVAAVIVLQAVGGLVVAVVVKYADNIRKSFATAISIIISCALSTLFFAFKPTFLFFIGSAMVVGSVFLYTKQDRPARLPLFNK 328          
BLAST of mRNA_P-canaliculata_contig1003.86.1 vs. uniprot
Match: A0A836C750_9STRA (Nucleotide-sugar transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C750_9STRA)

HSP 1 Score: 325 bits (833), Expect = 1.200e-105
Identity = 186/352 (52.84%), Postives = 233/352 (66.19%), Query Frame = 2
Query:  185 KHLSLGLLVLQNTSLVLLMRYSLTNEGPRYVKSTAVAMMEMLKLTVCFLVLYMESGESKAFFKKLRLEVAWKPLEMAKLMVPALLYTVQNNLLYIALQHLDPATYSVCYQTKILTTALFSVVLLGKRLSLLKWSSLVLLMVGVALAELSNDHTSRTKKAAVVQVPML---------------------------------------------GFWCVVAAACTSGFAGVYFEMLLKGSKTSLWVRNIQMGLSSIVLAFAGVFLNDWEEVRSNGFFYGYNGAVVGVVLLQAGGGLVVAVVVKYTDNIRKSFAAAVSIVMSCIMSMFLFDFKPNLLFVIGSSLVCTSVFMYSRP 1105
            K+ SLGLLVLQNT+LVLLM YS   EGP Y  STAVA ME++K+  C  V+++ SG  K F + +++E+  KP E+ KL +P+ LY VQNNLLY AL +LDPATYSVCYQ KI+TTALFSV+LL KRLS LKW +LVLL +GVALAEL+     +   A     PML                                             GF CV+AA CTSGFAGV+FEM+LKG+KTSLW+RN+QMGL SI+ A A  +  D   +R  GFFYGY G V GV++LQA GGL+VAVVVKY DNI K+FA+AVSIV SC++S  LF F+P+ +F++G+ LV  SVF+YS+P
Sbjct:    7 KYGSLGLLVLQNTALVLLMSYSRNVEGPLYTSSTAVATMEVMKVITCCGVIFVTSGGYKPFLRTMKIEIVNKPAELGKLALPSFLYMVQNNLLYEALSNLDPATYSVCYQLKIMTTALFSVILLKKRLSPLKWMALVLLTLGVALAELATHAAPKAADADAPPEPMLPLPTAAPDLDSGSAIGNPLQRRLQEDGEAAALGGFEELKMQRQLLGFLCVLAATCTSGFAGVWFEMILKGAKTSLWIRNVQMGLPSILFALASCYTKDLALLRDRGFFYGYTGIVWGVIVLQAVGGLMVAVVVKYADNILKAFASAVSIVTSCLLSALLFGFRPSPVFMVGTLLVSVSVFLYSKP 358          
BLAST of mRNA_P-canaliculata_contig1003.86.1 vs. uniprot
Match: A0A7S2WAX6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WAX6_9STRA)

HSP 1 Score: 295 bits (754), Expect = 2.130e-94
Identity = 173/306 (56.54%), Postives = 213/306 (69.61%), Query Frame = 2
Query:  185 KHLSLGLLVLQNTSLVLLMRYSLTNEGPRYVKSTAVAMMEMLKLTVCFLVLYMESGESKAFFK-KLRLEVAWKPLEMAKLMVPALLYTVQNNLLYIALQHLDPATYSVCYQTKILTTALFSVVLL-GKRLSLLKWSSLVLLMVGVALAELSNDHTSRTKKAAVVQVPMLGFWCVVAAACTSGFAGVYFEMLLKGSKTSLWVRNIQMGLSSIVLAFAGVFLNDWEEVRSNGFFYGYNGAVVGVVLLQAGGGLVVAVVVKYTDNIRKSFAAAVSIVMSCIMSMFLFDFKPNLLFVIGSSLVCTSVFMY 1096
            K+ +L LLVLQNT+LVL MRYS  ++GPRYV STAVA ME++K   C  VL+ +   S A F   L  +V  KPLE+ KL VP+LLY VQNNLLY AL HL    Y V YQ KILT+A+FSV++L GKRLS LKW SL++L  GV L + S   ++        Q   +GF  V+ A+ TSGFAGVYFE +LKGS  SLW+RNIQMG  SIVL+FA V+  D E+VR  GFFYGYN  VV V+LLQA GG+VVA+VVKY DNI K FAA+ SIV SCI+ M  F+F PN+ F +G+ LV  S+ +Y
Sbjct:    6 KYGALALLVLQNTALVLTMRYSRVSDGPRYVSSTAVASMELVKFVTCLAVLFAQGKYSLARFSGTLSQQVVNKPLEVVKLSVPSLLYMVQNNLLYFALSHLSATPYQVLYQLKILTSAVFSVLMLPGKRLSALKWFSLLVLTFGVVLTKTSQGSSTDGG-----QDSFMGFVAVILASVTSGFAGVYFERVLKGSHASLWLRNIQMGCCSIVLSFATVYWQDGEQVREQGFFYGYNRVVVAVILLQALGGIVVALVVKYADNILKGFAASFSIVTSCILEMLFFEFAPNVNFFLGAVLVNVSIALY 306          
BLAST of mRNA_P-canaliculata_contig1003.86.1 vs. uniprot
Match: A0A7S2U9J9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U9J9_9STRA)

HSP 1 Score: 291 bits (746), Expect = 1.420e-92
Identity = 169/316 (53.48%), Postives = 216/316 (68.35%), Query Frame = 2
Query:  185 KHLSLGLLVLQNTSLVLLMRYSLTN-----EGPRYVKSTAVAMMEMLKLTVCFLVLYMESGES-KAFFKKLRLEVAWKPLEMAKLMVPALLYTVQNNLLYIALQHLDPATYSVCYQTKILTTALFSVVLLGKRLSLLKWSSLVLLMVGVALAELSND---HTSRTKKAAVVQVPMLGFWCVVAAACTSGFAGVYFEMLLKGSKTSLWVRNIQMGLSSIVLAFAGVFLNDWEEVRSNGFFYGYNGAVVGVVLLQAGGGLVVAVVVKYTDNIRKSFAAAVSIVMSCIMSMFLFDFKPNLLFVIGSSLVCTSVFMYSRP 1105
            K+ SL LLV Q   LVLLMRYS T+     +   Y+ STAV +ME +K  +C +V++++SG S  A + +L   V   P E+ KL VP+LLYTVQNNLLY+AL +LD ATY VCYQ KILTTALFS  LL +  S LKW SLV+L +GVA+ +LS     H     +    +  M+G   V+ AACTSGFAGVYFE +LKGS T+LW+RNIQMGL S+++A+ GV++ D   +   GFF GY   V  VV +QA GGL+VAVVVKY DN+ K FA + SI++SCI+S  +FDF+PN LFV G+SLV  S  MYSRP
Sbjct:   42 KYGSLFLLVAQMVGLVLLMRYSRTSAVESEDTQLYLASTAVFLMEAMKFAICLVVIFVQSGSSPSALYDELYEHVWNSPFEVLKLCVPSLLYTVQNNLLYLALTNLDAATYQVCYQLKILTTALFSATLLQRSFSRLKWMSLVILTIGVAIVQLSGSGDKHHHVASEDEASRNRMVGLVAVLCAACTSGFAGVYFERILKGSSTTLWLRNIQMGLPSVIIAYIGVYMKDSMIIAEKGFFVGYTPLVWTVVTVQAVGGLIVAVVVKYADNVLKVFATSFSIIISCIISAVVFDFRPNFLFVCGASLVMASTVMYSRP 357          
BLAST of mRNA_P-canaliculata_contig1003.86.1 vs. uniprot
Match: A0A6P8HUC8_ACTTE (UDP-N-acetylglucosamine transporter-like isoform X1 n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HUC8_ACTTE)

HSP 1 Score: 287 bits (735), Expect = 8.690e-91
Identity = 162/314 (51.59%), Postives = 215/314 (68.47%), Query Frame = 2
Query:  185 KHLSLGLLVLQNTSLVLLMRYS-LTNEGPRYVKSTAVAMMEMLKLTVCFLVLYMESGES-KAFFKKLRLEVAWKPLEMAKLMVPALLYTVQNNLLYIALQHLDPATYSVCYQTKILTTALFSVVLLGKRLSLLKWSSLVLLMVGVALAELSNDHTSRTKKAAVVQVPMLGFWCVVAAACTSGFAGVYFEMLLKGSKTSLWVRNIQMGLSSIVLAFAGVFLNDWEEVRSNGFFYGYNGAVVGVVLLQAGGGLVVAVVVKYTDNIRKSFAAAVSIVMSCIMSMFLF-DFKPNLLFVIGSSLVCTSVFMYSRPSETI 1117
            KH+ LG+LVLQ ++LVL+MRYS +T+EGP Y+ STAV M E+ K   C  V++ ++G S KAF  ++  E+  KP E  KL +P+ LYT+QNNLL++AL +LD ATY V YQ KILTTALFSVV+LG+RL+ +KW +LVLLM GVAL E  + +    KK       ++G   V+ A C+SGFAGVYFE +LKG+K S+W+RNIQ+G   ++  F  VF+ND   V  +GFF GYN     V+ LQA GGLVVA VVKY DNI K FA ++SI++S I+S +L  DF P  LF IG+  V  +  +Y+RP   I
Sbjct:   64 KHVCLGVLVLQTSTLVLIMRYSRMTHEGPVYISSTAVVMAEIFKFLACLSVMFSQAGYSWKAFSTQIDNEIISKPWETLKLAIPSGLYTIQNNLLFLALSNLDAATYQVTYQLKILTTALFSVVMLGRRLNKMKWFALVLLMAGVALVEWPSGNEKDLKKDISASGKLIGLIAVLCACCSSGFAGVYFEKILKGTKASIWLRNIQLGSFGVLFGFMAVFVNDGTAVHQSGFFIGYNYITWIVIFLQAFGGLVVAAVVKYADNILKGFATSLSIILSSIVSYYLLKDFYPTSLFFIGTCAVLLATLLYARPESKI 377          
BLAST of mRNA_P-canaliculata_contig1003.86.1 vs. uniprot
Match: B7FYG7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FYG7_PHATC)

HSP 1 Score: 285 bits (728), Expect = 1.770e-90
Identity = 168/325 (51.69%), Postives = 220/325 (67.69%), Query Frame = 2
Query:  227 LVLLMRYSLTNEG---PRYVKSTAVAMMEMLKLTVCFLVLYMESGESKAFFKKLRLEVAWKPLEMAKLMVPALLYTVQNNLLYIALQHLDPATYSVCYQTKILTTALFSVVLLGKRLSLLKWSSLVLLMVGVALAELS---NDHTSRTKKAAVVQVP-----------MLGFWCVVAAACTSGFAGVYFEMLLKGSKTSLWVRNIQMGLSSIVLAFAGVFLNDWEEVRSNGFFYGYNGAVVGVVLLQAGGGLVVAVVVKYTDNIRKSFAAAVSIVMSCIMSMFLFDFKPNLLFVIGSSLVCTSVFMYSRPSETIGLPTYHKTVAP 1150
            LVLLMRYS T      P Y+ STAV +ME++KL +C  V+ +++        +L       PLE+ KL VP+LLYTVQNNLLY+AL +LD ATY VCYQ KILTTALFS +LL ++ S +KW SLV+L +GVA+ +LS   + H+ +  KAA   V             +G   V+ AACTSGF+GVYFE +LKGS+TSLW+RN+QMGLSSIV+A+  V++ D E +R+ GF+ GYN  V  VV +QA GGL+VA VVKY DN+ K FA + SIV+SCI+S FLFDF P++ F++G+SLV T+  MYS P ET    T  + V P
Sbjct:    4 LVLLMRYSRTQHDDTQPLYLASTAVFLMEVMKLVICVGVIAVQT--KSGVLHELYTHTIGSPLELLKLTVPSLLYTVQNNLLYLALTNLDAATYQVCYQLKILTTALFSALLLQRKFSTMKWLSLVVLTIGVAIVQLSGSGDQHSEQDSKAATDAVDDTNGTAAAHTRWVGLVAVLCAACTSGFSGVYFEKILKGSRTSLWIRNVQMGLSSIVIAYLTVYVKDAEAIRTQGFWGGYNTLVWTVVTVQAVGGLIVATVVKYADNVLKVFATSFSIVVSCIVSAFLFDFHPSVSFLVGASLVVTATVMYSSP-ETRTRKTRRRPVLP 325          
BLAST of mRNA_P-canaliculata_contig1003.86.1 vs. uniprot
Match: A0A6P4ZWH3_BRABE (UDP-N-acetylglucosamine transporter-like n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZWH3_BRABE)

HSP 1 Score: 283 bits (723), Expect = 8.290e-90
Identity = 161/310 (51.94%), Postives = 211/310 (68.06%), Query Frame = 2
Query:  185 KHLSLGLLVLQNTSLVLLMRYSLTNE--GPRYVKSTAVAMMEMLKLTVCFLVLYMESGES-KAFFKKLRLEVAWKPLEMAKLMVPALLYTVQNNLLYIALQHLDPATYSVCYQTKILTTALFSVVLLGKRLSLLKWSSLVLLMVGVALAELSNDHTSRTKKAAVVQVPMLGFWCVVAAACTSGFAGVYFEMLLKGSKTSLWVRNIQMGLSSIVLAFAGVFLNDWEEVRSNGFFYGYNGAVVGVVLLQAGGGLVVAVVVKYTDNIRKSFAAAVSIVMSCIMSMFLFD-FKPNLLFVIGSSLVCTSVFMYSR 1102
            K+LSLG+L+LQ TSLVL MRYS T E  GPRY+ STAV + E++K+  C ++++ E G S       LR E+  KPLE  KL VP++LYT+QNNLLY+AL +LD ATY V YQ KILTTALFSV +LG+RL   KW +LVLLM GVAL ++  +      K   +   ++G   V+ A CTS FAGVYFE +LKGS+ SLWVRNIQ+GL   +     V ++D+E V   GF  GYN     VV LQA GGLV+A V+KY DNI K FA ++SI++S +MS ++ D F+P+  F IG+S+V  + F+YSR
Sbjct:    5 KYLSLGVLILQTTSLVLTMRYSRTAETRGPRYLSSTAVVVAEVMKIAACVVLVFFEQGMSISRLGSTLRQELVGKPLETLKLAVPSVLYTLQNNLLYVALSNLDAATYQVTYQLKILTTALFSVAMLGRRLETSKWVALVLLMTGVALVQMPAEAKPEASKTHSLGSQVVGLLSVLTACCTSAFAGVYFEKILKGSRPSLWVRNIQLGLFGAIFGLFAVVMSDYELVVELGFLQGYNSITWTVVSLQAFGGLVIAAVIKYADNILKGFATSLSIILSTVMSYYILDDFRPSSHFFIGASIVICATFLYSR 314          
BLAST of mRNA_P-canaliculata_contig1003.86.1 vs. uniprot
Match: A0A7S4SDY4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SDY4_9STRA)

HSP 1 Score: 283 bits (723), Expect = 8.200e-89
Identity = 164/316 (51.90%), Postives = 212/316 (67.09%), Query Frame = 2
Query:  185 KHLSLGLLVLQNTSLVLLMRYSLTN---EGPRYVKSTAVAMMEMLKLTVCFLVLYMESGES-KAFFKKLRLEVAWKPLEMAKLMVPALLYTVQNNLLYIALQHLDPATYSVCYQTKILTTALFSVVLLGKRLSLLKWSSLVLLMVGVALAELSNDHTSRTKKAAVVQVPM---LGFWCVVAAACTSGFAGVYFEMLLKGSKTSLWVRNIQMGLSSIVLAFAGVFLNDWEEVRSNGFFYGYNGAVVGVVLLQAGGGLVVAVVVKYTDNIRKSFAAAVSIVMSCIMSMFLFDFKPNLLFVIGSSLVCTSVFMYSRPSE 1111
            K+ SL LLV Q   LVLLMRYS T    +G  Y+ STAV +ME++K  +C  V++  SG S  +   +L   +   P E+ KL VP+LLY VQNNLLYIAL +LD ATY VCYQ KILTTA+FS +LL +  S  KW SL++L  GVA+ + S      +   A V +     +G   V+ AACTSGF+GVYFE +LKGSKTSLW+RNIQMG SSI ++   VFL D   V + GFF GY+  V  VV +QA GGL+VAVVVKY DN+ K+FAA+ SI+ SCI+S  LFDF+PN +F+ G++LV +S  +YS P +
Sbjct:   67 KYGSLFLLVAQMVGLVLLMRYSRTRTSVDGEMYLASTAVFIMEVMKFIICIGVIFFSSGLSISSLSSELNTHIWMSPFEVLKLCVPSLLYAVQNNLLYIALTNLDAATYQVCYQLKILTTAIFSAILLKRTFSCTKWFSLIILTAGVAIVQTSGSSDKSSSSDANVSINQNRFVGTVAVLCAACTSGFSGVYFEKILKGSKTSLWIRNIQMGFSSIFISLIMVFLQDLAAVSTKGFFVGYSPLVWLVVTIQAAGGLIVAVVVKYADNVLKTFAASFSIIASCIVSSVLFDFQPNKMFLAGAALVVSSTVLYSWPDQ 382          
BLAST of mRNA_P-canaliculata_contig1003.86.1 vs. uniprot
Match: A0A7S3L616_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L616_9STRA)

HSP 1 Score: 282 bits (722), Expect = 1.560e-88
Identity = 164/321 (51.09%), Postives = 216/321 (67.29%), Query Frame = 2
Query:  185 KHLSLGLLVLQNTSLVLLMRYSLTNEGPR---YVKSTAVAMMEMLKLTVCFLVLYMESGESKAFFKKLRLEVAWKPLEMAKLMVPALLYTVQNNLLYIALQHLDPATYSVCYQTKILTTALFSVVLLGKRLSLLKWSSLVLLMVGVALAELSNDHTSRTKKAAVVQVP---------MLGFWCVVAAACTSGFAGVYFEMLLKGSKTSLWVRNIQMGLSSIVLAFAGVFLNDWEEVRSNGFFYGYNGAVVGVVLLQAGGGLVVAVVVKYTDNIRKSFAAAVSIVMSCIMSMFLFDFKPNLLFVIGSSLVCTSVFMYSRPSE 1111
            K+ +L LLV Q   LVL+MRYS T + P    Y+ STAV +ME++KL VC +++  ++    A  ++L   V   P+E+ KL VP+LLYTVQNNLLY+AL +LD ATY VCYQ KILTTALFS V+L ++ S  KW +LV+L VGVA+ ++S      +        P         ++G   V+ AACTSGF+GVYFE +LKGS+TSLW+RNIQMGL S+V+A+  V + D   VR  GFF GYN  V  VV +QA GGL+VA VVKY DN+ K FA + SIV+SCI+S FLFDF P+ +F+ G+SLV T+  MYS P +
Sbjct:   79 KYTALLLLVAQMVGLVLIMRYSRTTKDPDKPLYLASTAVFIMEVMKLVVCLVIVAFQANG--ALHQELHQHVIQSPMEILKLTVPSLLYTVQNNLLYLALTNLDAATYQVCYQLKILTTALFSAVMLQRKFSGQKWFALVVLTVGVAVVQVSGSGDQHSDXXXXXXXPSNQEAPQNRVVGLVAVLCAACTSGFSGVYFEKILKGSRTSLWIRNIQMGLPSVVIAYIAVCVKDAAAVRQQGFFGGYNNIVWTVVAVQAIGGLIVATVVKYADNVLKVFATSFSIVLSCIISAFLFDFHPSWMFLCGASLVVTATVMYSSPEK 397          
BLAST of mRNA_P-canaliculata_contig1003.86.1 vs. uniprot
Match: A0A7S2W3R8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W3R8_9STRA)

HSP 1 Score: 279 bits (714), Expect = 2.350e-88
Identity = 166/316 (52.53%), Postives = 214/316 (67.72%), Query Frame = 2
Query:  185 KHLSLGLLVLQNTSLVLLMRYSLT-NEGPRYVKSTAVAMMEMLKLTVCFLVLYMESGES-KAFFKKLRLEVAWKPLEMAKLMVPALLYTVQNNLLYIALQHLDPATYSVCYQTKILTTALFSVVLLGKRLSLLKWSSLVLLMVGVALAELSNDHTSRTKKAA----VVQVPMLGFWCVVAAACTSGFAGVYFEMLLKGSKT---SLWVRNIQMGLSSIVLAFAGVFLNDWEEVRSNGFFYGYNGAVVGVVLLQAGGGLVVAVVVKYTDNIRKSFAAAVSIVMSCIMSMFLFDFKPNLLFVIGSSLVCTSVFMYSRP 1105
            K+ SL LLV Q   LV+LMRYS T N GP Y+ STAV MME++K  +C  V+++ +G + +      +  V   P E+ KL VP+LLYTVQNNLLYIAL +LD  TY V YQ KILTTALFSVVLL ++ S LKW SLV+L +GVA+ ++S      +K+           ++GF CV+ AACTSGFAGVYFE +LKG  +   +LW+RNIQMGL S+++AF  VFL+D  +V   GFF GY+  V  V+L+QA GGL+VAVVVKY DN+ K FA + SI+ SCI+S    DF PN  F IG++LV  S  +YSRP
Sbjct:    3 KYGSLVLLVAQMMGLVILMRYSRTHNSGPLYISSTAVFMMEVIKFLICNGVVFVGAGSTWRGLCASWQEHVVEAPWEVLKLCVPSLLYTVQNNLLYIALTNLDATTYQVTYQLKILTTALFSVVLLQRKFSPLKWFSLVILTLGVAIVQISGSGDLHSKEGGPDNXXXXXRLVGFTCVIFAACTSGFAGVYFERILKGGGSKAPTLWIRNIQMGLPSVIIAFLTVFLHDRAQVLEQGFFSGYSPMVWTVILVQAVGGLIVAVVVKYADNVLKVFATSFSIIGSCIISSLFLDFHPNYYFTIGTTLVVFSTIIYSRP 318          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig1003.86.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJJ6_ECTSI1.220e-13865.55Solute carrier family 35 member 3A, partial n=1 Ta... [more]
A0A836C750_9STRA1.200e-10552.84Nucleotide-sugar transporter-domain-containing pro... [more]
A0A7S2WAX6_9STRA2.130e-9456.54Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2U9J9_9STRA1.420e-9253.48Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A6P8HUC8_ACTTE8.690e-9151.59UDP-N-acetylglucosamine transporter-like isoform X... [more]
B7FYG7_PHATC1.770e-9051.69Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A6P4ZWH3_BRABE8.290e-9051.94UDP-N-acetylglucosamine transporter-like n=3 Tax=B... [more]
A0A7S4SDY4_9STRA8.200e-8951.90Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S3L616_9STRA1.560e-8851.09Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2W3R8_9STRA2.350e-8852.53Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig1003contigP-canaliculata_contig1003:16723..18829 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score406.0
Seed ortholog evalue1.7e-110
Seed eggNOG ortholog2880.D7FJJ6
KEGG koko:K15272
KEGG TC2.A.7.12
EggNOG free text desc.pyrimidine nucleotide-sugar transmembrane transporter activity
EggNOG OGsCOG0697@1,KOG2234@2759
COG Functional cat.EG
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionUDP-galactose transporter
Ec32 orthologEc-04_006360.1
Exons3
Model size1153
Cds size993
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig1003.86.1prot_P-canaliculata_contig1003.86.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig1003 16723..18669 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815576.1755283-CDS-P-canaliculata_contig1003:16722..175321622815576.1755283-CDS-P-canaliculata_contig1003:16722..17532Pelvetia canaliculata dioeciousCDSP-canaliculata_contig1003 16723..17532 -
1693494146.2380207-CDS-P-canaliculata_contig1003:16722..175321693494146.2380207-CDS-P-canaliculata_contig1003:16722..17532Pelvetia canaliculata dioeciousCDSP-canaliculata_contig1003 16723..17532 -
1622815576.1864636-CDS-P-canaliculata_contig1003:18226..182651622815576.1864636-CDS-P-canaliculata_contig1003:18226..18265Pelvetia canaliculata dioeciousCDSP-canaliculata_contig1003 18227..18265 -
1693494146.2495236-CDS-P-canaliculata_contig1003:18226..182651693494146.2495236-CDS-P-canaliculata_contig1003:18226..18265Pelvetia canaliculata dioeciousCDSP-canaliculata_contig1003 18227..18265 -
1622815576.196418-CDS-P-canaliculata_contig1003:18525..186691622815576.196418-CDS-P-canaliculata_contig1003:18525..18669Pelvetia canaliculata dioeciousCDSP-canaliculata_contig1003 18526..18669 -
1693494146.262703-CDS-P-canaliculata_contig1003:18525..186691693494146.262703-CDS-P-canaliculata_contig1003:18525..18669Pelvetia canaliculata dioeciousCDSP-canaliculata_contig1003 18526..18669 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815576.212472-UTR-P-canaliculata_contig1003:18669..188291622815576.212472-UTR-P-canaliculata_contig1003:18669..18829Pelvetia canaliculata dioeciousUTRP-canaliculata_contig1003 18670..18829 -
1693494146.2886865-UTR-P-canaliculata_contig1003:18669..188291693494146.2886865-UTR-P-canaliculata_contig1003:18669..18829Pelvetia canaliculata dioeciousUTRP-canaliculata_contig1003 18670..18829 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig1003.86.1

>prot_P-canaliculata_contig1003.86.1 ID=prot_P-canaliculata_contig1003.86.1|Name=mRNA_P-canaliculata_contig1003.86.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=331bp
MSWFAGNAKHLSLGLLVLQNTSLVLLMRYSLTNEGPRYVKSTAVAMMEML
KLTVCFLVLYMESGESKAFFKKLRLEVAWKPLEMAKLMVPALLYTVQNNL
LYIALQHLDPATYSVCYQTKILTTALFSVVLLGKRLSLLKWSSLVLLMVG
VALAELSNDHTSRTKKAAVVQVPMLGFWCVVAAACTSGFAGVYFEMLLKG
SKTSLWVRNIQMGLSSIVLAFAGVFLNDWEEVRSNGFFYGYNGAVVGVVL
LQAGGGLVVAVVVKYTDNIRKSFAAAVSIVMSCIMSMFLFDFKPNLLFVI
GSSLVCTSVFMYSRPSETIGLPTYHKTVAP*
back to top

mRNA from alignment at P-canaliculata_contig1003:16723..18829-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig1003.86.1 ID=mRNA_P-canaliculata_contig1003.86.1|Name=mRNA_P-canaliculata_contig1003.86.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=2107bp|location=Sequence derived from alignment at P-canaliculata_contig1003:16723..18829- (Pelvetia canaliculata dioecious)
CATTGCTGTATCTGTGTTGGTATTTGGCATGTCGGCAAGTCTGGATGAAT GTCAAAACGCATCCAGGGGTAGGTAACGATACCGTGCATGCAATGCTGTT CTGGTGCACCGGTATAAGAACGACGGCCAAGGGTTGAGAGTTGCTACTCT TTCATGCACCATGTCGTGGTTCGCTGGAAATGCGAAGCACCTCTCCTTGG GTCTTCTGGTTCTACAGAACACATCTTTGGTCCTCCTGATGCGTTACAGC CTCACGAACGAGGGACCTCGTTATGTCAAGTCTACCGCGGTTGCTATGAT GGAGGTGAGGAGCTTATCTTAGGCTGATACATATCGCATCAATAGGAATG GTCCATATTGCAAAGCCCCTACGGTACTTTGGACCGAACGGTTGCTGATC ACCGAGGACGTCTTGGGGTCAAAGTCTCTTGGACAGCACCGGCATCGCCC CATTGTGCGGTGTTTCACGTATCGAGCTTTAGTCCGGCTGCACCATCCTA AATTGCCCTCTGTTATCTCTCGCGTGTTCTTGCCCTTCCCCCGATGGCGT CTATCACGATGCAGATGTTGAAGCTCACAGTATGCTTCTTGGTGCTCTAT ATGGTGAGCCGCAGCAGTCGGGAATCGTATTTGTTCCATGATCGACAGGA TACCCGCATATCACAACCAAAACGTACATTTTGCACTGCCAGTATTTAAG AAAGTAAACGTACATGCGCCCGCAACATCTACGGCTGGAAGATATTCTTT ACACATCGAAGGTACTTGATGTTTTGTGCTCGTGTAGTTTTTGCCGCTTT CCCTGCTATCGAAGGTACACGCGCCAATAGACCCTATCTATGAATTAGAA GACATTTCGCGCGCGCGTGTGTGTAGTCATCACTTCTAGCGGATTGCGCA CCGAAAGCTTATGATTGTGGTCAACTCAACAGGGGAAGTTAATTTTTGCA AAGGTTTTTCCCTGTCCCCGTTCGCGGCCAAGACAAGAAGAATGTTGTTT GGCGAGACAGGTTCGACTGCCCCGTCACCCTTCGCGGCTGGATCTGTAGG TTACTCACGGGCTCCATCCCATATTTCCTCCCCTGTTCCGCGACGGTGAT CATCCGAACCATCAACCACGATTAGTTATCGATTTGTACAAAGCACAACA TAGCAAGAGTAGATCCTGGAGCGACCGTTAACGCCAATGCAATTATGCCC TTCTACTGACTATTACCCATGCGTTTTCTTTCTTGCACGGTTCGACGTGT TGATCAACGCCCCCTGGTGATTGATTGACCACGCCCCCGGCAAACAGGAG TCTGGGGAATCGAAGGCGTTTTTCAAAAAGCTGCGTCTGGAAGTAGCTTG GAAGCCGCTGGAGATGGCGAAGCTTATGGTACCAGCCTTGCTCTACACGG TCCAAAACAATCTACTGTACATCGCGCTGCAGCATCTTGACCCTGCCACC TACAGCGTATGCTACCAAACCAAAATCCTCACTACCGCTCTCTTCTCTGT AGTTCTGTTGGGCAAAAGATTGAGTCTTCTCAAGTGGTCTTCACTGGTGT TGCTCATGGTAGGAGTTGCCCTGGCCGAGTTGTCCAACGACCATACAAGT AGAACAAAGAAGGCAGCGGTTGTGCAGGTACCAATGCTGGGCTTTTGGTG TGTTGTAGCAGCTGCTTGCACATCTGGATTCGCTGGAGTCTACTTCGAGA TGCTCTTGAAAGGCAGCAAGACTTCCCTGTGGGTCAGAAACATCCAAATG GGACTTTCTAGCATCGTACTGGCTTTCGCGGGTGTCTTCCTGAACGATTG GGAGGAGGTGAGATCAAACGGATTTTTTTACGGATACAACGGGGCAGTTG TGGGAGTCGTCCTCCTGCAGGCGGGAGGAGGCCTTGTGGTCGCTGTTGTG GTAAAATATACCGATAACATACGGAAATCGTTCGCTGCAGCAGTGTCGAT AGTAATGTCGTGCATCATGTCTATGTTCTTGTTCGACTTCAAACCGAATC TTCTTTTCGTTATCGGTTCCAGTTTGGTGTGCACCTCGGTGTTCATGTAT AGCAGGCCGTCAGAGACTATAGGACTGCCAACGTATCACAAGACGGTCGC ACCCTAG
back to top

Coding sequence (CDS) from alignment at P-canaliculata_contig1003:16723..18829-

>mRNA_P-canaliculata_contig1003.86.1 ID=mRNA_P-canaliculata_contig1003.86.1|Name=mRNA_P-canaliculata_contig1003.86.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1986bp|location=Sequence derived from alignment at P-canaliculata_contig1003:16723..18829- (Pelvetia canaliculata dioecious)
ATGTCGTGGTTCGCTGGAAATGCGAAGCACCTCTCCTTGGGTCTTCTGGT
TCTACAGAACACATCTTTGGTCCTCCTGATGCGTTACAGCCTCACGAACG
AGGGACCTCGTTATGTCAAGTCTACCGCGGTTGCTATGATGGAGATGTCG
TGGTTCGCTGGAAATGCGAAGCACCTCTCCTTGGGTCTTCTGGTTCTACA
GAACACATCTTTGGTCCTCCTGATGCGTTACAGCCTCACGAACGAGGGAC
CTCGTTATGTCAAGTCTACCGCGGTTGCTATGATGGAGATGTTGAAGCTC
ACAGTATGCTTCTTGGTGCTCTATATGATGTTGAAGCTCACAGTATGCTT
CTTGGTGCTCTATATGGAGTCTGGGGAATCGAAGGCGTTTTTCAAAAAGC
TGCGTCTGGAAGTAGCTTGGAAGCCGCTGGAGATGGCGAAGCTTATGGTA
CCAGCCTTGCTCTACACGGTCCAAAACAATCTACTGTACATCGCGCTGCA
GCATCTTGACCCTGCCACCTACAGCGTATGCTACCAAACCAAAATCCTCA
CTACCGCTCTCTTCTCTGTAGTTCTGTTGGGCAAAAGATTGAGTCTTCTC
AAGTGGTCTTCACTGGTGTTGCTCATGGTAGGAGTTGCCCTGGCCGAGTT
GTCCAACGACCATACAAGTAGAACAAAGAAGGCAGCGGTTGTGCAGGTAC
CAATGCTGGGCTTTTGGTGTGTTGTAGCAGCTGCTTGCACATCTGGATTC
GCTGGAGTCTACTTCGAGATGCTCTTGAAAGGCAGCAAGACTTCCCTGTG
GGTCAGAAACATCCAAATGGGACTTTCTAGCATCGTACTGGCTTTCGCGG
GTGTCTTCCTGAACGATTGGGAGGAGGTGAGATCAAACGGATTTTTTTAC
GGATACAACGGGGCAGTTGTGGGAGTCGTCCTCCTGCAGGCGGGAGGAGG
CCTTGTGGTCGCTGTTGTGGTAAAATATACCGATAACATACGGAAATCGT
TCGCTGCAGCAGTGTCGATAGTAATGTCGTGCATCATGTCTATGTTCTTG
TTCGACTTCAAACCGAATCTTCTTTTCGTTATCGGTTCCAGTTTGGTGTG
CACCTCGGTGTTCATGTATAGCAGGCCGTCAGAGACTATAGGACTGCCAA
CGTATCACAAGACGGTCGCACCCTAGGAGTCTGGGGAATCGAAGGCGTTT
TTCAAAAAGCTGCGTCTGGAAGTAGCTTGGAAGCCGCTGGAGATGGCGAA
GCTTATGGTACCAGCCTTGCTCTACACGGTCCAAAACAATCTACTGTACA
TCGCGCTGCAGCATCTTGACCCTGCCACCTACAGCGTATGCTACCAAACC
AAAATCCTCACTACCGCTCTCTTCTCTGTAGTTCTGTTGGGCAAAAGATT
GAGTCTTCTCAAGTGGTCTTCACTGGTGTTGCTCATGGTAGGAGTTGCCC
TGGCCGAGTTGTCCAACGACCATACAAGTAGAACAAAGAAGGCAGCGGTT
GTGCAGGTACCAATGCTGGGCTTTTGGTGTGTTGTAGCAGCTGCTTGCAC
ATCTGGATTCGCTGGAGTCTACTTCGAGATGCTCTTGAAAGGCAGCAAGA
CTTCCCTGTGGGTCAGAAACATCCAAATGGGACTTTCTAGCATCGTACTG
GCTTTCGCGGGTGTCTTCCTGAACGATTGGGAGGAGGTGAGATCAAACGG
ATTTTTTTACGGATACAACGGGGCAGTTGTGGGAGTCGTCCTCCTGCAGG
CGGGAGGAGGCCTTGTGGTCGCTGTTGTGGTAAAATATACCGATAACATA
CGGAAATCGTTCGCTGCAGCAGTGTCGATAGTAATGTCGTGCATCATGTC
TATGTTCTTGTTCGACTTCAAACCGAATCTTCTTTTCGTTATCGGTTCCA
GTTTGGTGTGCACCTCGGTGTTCATGTATAGCAGGCCGTCAGAGACTATA
GGACTGCCAACGTATCACAAGACGGTCGCACCCTAG
back to top