prot_P-canaliculata_contig10403.555.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10403.555.1
Unique Nameprot_P-canaliculata_contig10403.555.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length366
Homology
BLAST of mRNA_P-canaliculata_contig10403.555.1 vs. uniprot
Match: D8LPN2_ECTSI (Cir_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPN2_ECTSI)

HSP 1 Score: 317 bits (813), Expect = 7.340e-103
Identity = 244/399 (61.15%), Postives = 287/399 (71.93%), Query Frame = 0
Query:    1 MSGRLIILPKKSWHPGKRENIEKVLRDERVAAEEADEARERAREVTQEGIVETLSKKRLL------EGRKVKEEPASRKRR----RPGEDQGENDGLGGKGQGWGETPQHVNLFSEAEREAEKQLGQNADYQSEKQEEELRAQRRSGLAPTALGEGSAEMKGEDSQPWYMQMN--ASAVVQNVAARTTRLGREVTGKEAVEALKRDEKRKNRADPLVSLFGSGS-----SLTIDR--TSNENRTKVSLTPGDTLSADPRGLDGTSTQGDRNKSSKXXXXXXXXXXXXXXXXXXXXXXXX-------SSRD--ARR------GDSGAKAGDDEGSTTDANQQQQLEDLRRRRLAREGGERERQIRLLAERQMVGLPFPDERRISYNNLYNATAARQNRLR 365
            MSGRLIILPKKSWHPGKRENIEKVLRDER+AAEEA  ARERARE+TQEGIVETL+KKR        E       PASR+RR    R  +D+ E + LGGKGQGWG T QHVNLFS+AEREA K LGQN+D+Q EK+E+EL+ Q+RSGLAPTALGEGSAE+K ++SQPWY Q+   ++A V  VAART RLGREVTG+EA EA+KRD+ RK +ADP+ SLF SG+     SL ++R  TS +     +  PG    A    +D  ++  +R K   XXXXXXXXXXXXXXXXXXXXXXXX       S RD  ARR      G SG +A +     TDA ++Q+L+DLR RRLAREGGERERQIRLLAER+M G   PDER  +YNN YNA AARQNR+R
Sbjct:    1 MSGRLIILPKKSWHPGKRENIEKVLRDERLAAEEAAAARERAREITQEGIVETLTKKRSASETIEGEANAASGTPASRRRRGQDKRRSQDRDE-EALGGKGQGWGATLQHVNLFSDAEREAGKILGQNSDHQREKKEQELQRQQRSGLAPTALGEGSAELKDKESQPWYTQLQPQSTACVSKVAARTVRLGREVTGQEAEEAIKRDQGRKGQADPMGSLFRSGAQPMRGSLPLERRGTSYQPEAATANLPG----AAGLCVDEATSHSNRGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRTRSDRDRFARRHSDSAAGLSGGRADE----ATDAQREQKLKDLRSRRLAREGGERERQIRLLAEREMAGQSLPDERTRAYNNQYNAPAARQNRIR 390          
BLAST of mRNA_P-canaliculata_contig10403.555.1 vs. uniprot
Match: A0A836CIP7_9STRA (Cir_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIP7_9STRA)

HSP 1 Score: 126 bits (316), Expect = 3.150e-29
Identity = 98/223 (43.95%), Postives = 127/223 (56.95%), Query Frame = 0
Query:    1 MSGRLIILPKKSWHPGKRENIEKVLRDERVAAEEADEARERAREVTQEGIVETLSKKRLLE------------GRKVKEEPASRKRRRPGEDQGENDGLGGKGQGWGETPQHVNLFSEAEREAEKQLGQNADYQSEKQEEELRAQRRSGLAPTALGEGSAEMKGE-DSQPWYMQMNASAVVQNVAARTTRL--GREVTGKEAVEALKRDEKRKNRADPLVSLF 208
            MSGRLIILPKKSWH  +R+N+E+V RDER+AAE  +EA E+A+   QE  VETL +KR  +            GRK ++  A     R G D G     GG  QGWG   QHVNLF E E  +    G N ++  EK+++EL  QRR G AP ALG  +A   GE    PWY +  ++A  Q   A  T +  GRE+ G+ A  AL RD++RK   DP+ +L 
Sbjct:    1 MSGRLIILPKKSWHVWRRDNLERVKRDERLAAEAQEEADEKAQRADQEIRVETLKRKREQQHQQPSAKVGDGRGRKSQKSTA-----RKGGDAG-----GGVDQGWGTGAQHVNLFPEPEARS----GGNVEHLREKEQQELLRQRREGAAPVALGGDAA---GELQLAPWYSKPASAAAAQASTAAATVVVRGRELEGEAAKRALGRDDRRKALLDPMAALI 206          
BLAST of mRNA_P-canaliculata_contig10403.555.1 vs. uniprot
Match: A0A7S3XJL8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XJL8_HETAK)

HSP 1 Score: 84.7 bits (208), Expect = 7.620e-16
Identity = 56/126 (44.44%), Postives = 74/126 (58.73%), Query Frame = 0
Query:  100 HVNLFSEAEREAEKQLGQNADYQSEKQEEELRAQRRSGLAPTALGEGSAEMKGEDSQPWYMQMNASAVVQNV--------------AARTTRL-GREVTGKEAVEALKRDEKRKNRADPLVSLFGS 210
            HVN F+  EREA K LG NAD++++++E EL+A RR  +AP ALG+GSAE KGE  +PWY    ASA   +V              A R  R+ GR++ G  A  A  RDE+RK   DP+ +L  S
Sbjct:   10 HVNFFAAEEREARKVLGVNADHEADEKERELQALRRKNMAPWALGDGSAEAKGEGLKPWYHYSTASADAGHVGSGGKISGGALAEPATRRMRVRGRDLVGGAAEAAWGRDERRKVSEDPMSALVSS 135          
BLAST of mRNA_P-canaliculata_contig10403.555.1 vs. uniprot
Match: A0A293M4V0_ORNER (Cir_N domain-containing protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293M4V0_ORNER)

HSP 1 Score: 65.1 bits (157), Expect = 3.130e-8
Identity = 60/190 (31.58%), Postives = 92/190 (48.42%), Query Frame = 0
Query:    7 ILPKKSWHPGKRENIEKVLRDERVAAEEADEARERAREVTQEGIVETLSKKRLLEGRKVKEEPASRKR----RRPGEDQGENDGLGGKGQGWGETPQHVNLFSEAEREAEKQLGQNADYQSEKQEEELRAQRRSGLAPTALGEGSAEMKGEDSQPWYMQMNASAVVQNVAARTTRLGREVTGKEAVEALK 192
            ILPKKSWH   + NIE+V RDE +AAEE  E + R +    E  +  L ++  L   +     A  K+     +  ++Q + D              HVN FSE E        +NAD++ EK+EE+   +++ GL  T LG+GS E  G  S  WY Q +   +   + +   R+ R+   K +++ LK
Sbjct:    3 ILPKKSWHVRTKRNIERVRRDEALAAEEEKEQQRRIQLAESEARINLLREQAKLRASRHHSVVADVKQPSLSNQDADEQKQRD--------------HVNFFSEVEGAQRSLHSKNADHEREKKEEQDEYEKKIGLL-TYLGQGSTEASGSSS--WYSQSHEKRM--EILSSAERVDRDAKVKASMDPLK 173          
BLAST of mRNA_P-canaliculata_contig10403.555.1 vs. uniprot
Match: A0A2R5LJQ0_9ACAR (Putative leukocyte receptor cluster member 1 (Fragment) n=1 Tax=Ornithodoros turicata TaxID=34597 RepID=A0A2R5LJQ0_9ACAR)

HSP 1 Score: 65.1 bits (157), Expect = 3.130e-8
Identity = 53/155 (34.19%), Postives = 79/155 (50.97%), Query Frame = 0
Query:    7 ILPKKSWHPGKRENIEKVLRDERVAAEEADEARERAREVTQEGIVETLSKKRLLE--GRKVKEEPASRKRRRPGEDQGENDGLGGKGQGWGETPQHVNLFSEAEREAEKQLGQNADYQSEKQEEELRAQRRSGLAPTALGEGSAEMKGEDSQPWY 159
            ILPKKSWH   + NIE+V RDE +AAEE  E + R +    E  +  L ++  L   G+       +++     ED+ E            +  +HVN F + E       G+NAD++ EK+EE+   +++ GL  T LG+GS+E  G  S  WY
Sbjct:    4 ILPKKSWHVRTKRNIERVRRDEALAAEEEKEQQRRVQLAESEARINLLREQAKLRSGGQGHSAVDGAKRESLSQEDEDER-----------KQKEHVNFFDDVESAQRSLHGKNADHEREKKEEQETYEKKIGLL-TYLGQGSSEASGSSS--WY 144          
BLAST of mRNA_P-canaliculata_contig10403.555.1 vs. uniprot
Match: A0A0B2V8L9_TOXCA (Leukocyte receptor cluster member 1-like protein n=1 Tax=Toxocara canis TaxID=6265 RepID=A0A0B2V8L9_TOXCA)

HSP 1 Score: 62.4 bits (150), Expect = 2.680e-7
Identity = 58/160 (36.25%), Postives = 81/160 (50.62%), Query Frame = 0
Query:    7 ILPKKSWHPGKRENIEKVLRDERVAAEEADEARERAREVTQEGIVETLSK---KRLLEGRKVKEEPASRKRRRPGEDQGENDGLGGKGQGWGETPQHVNLFSEAEREAEKQLGQ-NADYQSEKQEEELRAQRRSGLAPTALGEGSAEMKGEDSQPWYMQM 162
            ILPKK WH   +EN+ +V RD+++AAEE    RERA+   Q+  V  L K   +R+L     K E         GE   + +G  G          HVNLF+E E E  K LG  N +Y+ EK++E    + + G+    LGEGS +   + S  WY Q+
Sbjct:    3 ILPKKKWHVRTKENVARVRRDQKLAAEEEQRIRERAQLAEQQFKVNLLRKHADERMLTLCGTKREEVE-----SGEGSVQLEGCSG----------HVNLFAELEEEDRKNLGTGNKEYEEEKRKEREEYESKIGILKY-LGEGSNDFTKQKS--WYEQV 144          
BLAST of mRNA_P-canaliculata_contig10403.555.1 vs. uniprot
Match: UPI0014258B8D (leukocyte receptor cluster member 1 homolog n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014258B8D)

HSP 1 Score: 59.3 bits (142), Expect = 3.990e-6
Identity = 57/156 (36.54%), Postives = 85/156 (54.49%), Query Frame = 0
Query:    7 ILPKKSWHPGKRENIEKVLRDERVAAEEADEARERAREVTQEGIVETLSKKRLLEGRKVKEEPASRKRRRPGEDQGENDGLGGKGQGWGETPQ-HVNLFSEAEREAEKQLGQNADYQSEKQEEELRAQRRSGLAPTALGEGSAEMKGEDSQPWYMQ 161
            ILPKKSWH  K+ENIE+V RDE  AAEE  + + R     QE     L +K     RK   E   ++ +     QG++  L        + P+ H+N F + + E +K  G NAD+++EKQ E++  +++ GL  T LG+ SAE   +  +PWY +
Sbjct:    3 ILPKKSWHVLKKENIERVRRDEAKAAEEEKQKQARIALAEQEARTARLRQK----ARKNYNEAVKQQGQ-----QGDDLAL----VAIDDQPKGHINFFKDIQ-EGKKIGGVNADHEAEKQAEKINYEKKIGLL-TYLGQSSAEA--QTVKPWYQE 141          
BLAST of mRNA_P-canaliculata_contig10403.555.1 vs. uniprot
Match: A0A815GZH2_9BILA (Hypothetical protein n=3 Tax=Rotaria sordida TaxID=392033 RepID=A0A815GZH2_9BILA)

HSP 1 Score: 58.2 bits (139), Expect = 6.410e-6
Identity = 59/204 (28.92%), Postives = 97/204 (47.55%), Query Frame = 0
Query:    7 ILPKKSWHPGKRENIEKVLRDERVAAEEADEARERAREVTQEGIVETLSKKR---LLEGRKVKEEPASRKRRRPGEDQGENDGLGGKGQGWGETPQHVNLFSEAEREAEKQLGQNADYQSEKQEEELRAQRRSGLAPTALGEGSAEMKGEDSQPWYMQMNASAVVQNVAARTTRLGREVTGKEAVEALKRDEKRKNRADPLVSL 207
            ILPKK WH   ++NI +VLRDE+ AAEE ++A  R     QE  +  L  KR   +++ +  ++  +++K                         +HVNLF   E+  +     NA+++ EK+ E    +++ GL  T LG    E KG  + PWYM+   +   Q+++  +++  RE          +RD  R  + DPL S+
Sbjct:    3 ILPKKRWHVRTKDNIARVLRDEKKAAEEEEKALRRKTLAEQEARLNHLRAKRGDHVIQFQSPEDASSTQK-----------------------PTEHVNLFQLEEQGLKTSDATNAEHEKEKKTETEEFEKKIGLL-TYLGGSIVESKG--TVPWYMERGGNT--QSLSKESSKTDRE----------ERDRLRIQKQDPLSSM 168          
BLAST of mRNA_P-canaliculata_contig10403.555.1 vs. uniprot
Match: A0A7S3XLM5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLM5_HETAK)

HSP 1 Score: 53.1 bits (126), Expect = 3.870e-5
Identity = 32/64 (50.00%), Postives = 44/64 (68.75%), Query Frame = 0
Query:    1 MSGRLIILPKKSWHPGKRENIEKVLRDERVAAEEADEARERAREVTQEGIVETLSKKRLLEGRK 64
            MSGRLIIL  KSWH   ++NIEKV +DER+AAEE ++ +E+ R V QE  ++ L  +    G+K
Sbjct:    1 MSGRLIILRHKSWHVWNQDNIEKVKKDERLAAEEEEKNKEKQRLVDQEIRLDELKYRATHGGQK 64          
BLAST of mRNA_P-canaliculata_contig10403.555.1 vs. uniprot
Match: A0A4D9D443_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D443_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 8.700e-5
Identity = 63/185 (34.05%), Postives = 89/185 (48.11%), Query Frame = 0
Query:    2 SGRLIILPKKSWHPGKRENIEKVLRDERVAAEEADEARERAREVTQEGIVETLS--KKRLLEGRK--VKEEPASRKRRRPGEDQG----------ENDGL-----------GGKGQGWGETPQHVNLFSEAEREAEKQLGQNADYQSEKQEEELRAQRRSGLAPTALGEGSAEMKGEDSQPWYMQ 161
            SGRLIILPKK+WH   ++N E+VLRDER+  EE  +  E+ R+V ++  +E L   K++  EG    V    A+      G   G          +N+GL           G   QG      HV+LF +      KQ G N DY  E+  +ELR +R  G+AP     G  ++K   ++ WY Q
Sbjct:   22 SGRLIILPKKTWHVWNQDNRERVLRDERLHREEEAKQAEKQRDVARQDRLEMLRARKRQRDEGEDADVSHFEATSASEMGGGGVGALALGASRGLDNEGLCIPAAKSGYVEGANHQG------HVHLFGQVAEHLAKQAG-NKDYVRERAAQELRKKRAEGVAPW----GFDDVK--PARQWYEQ 193          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10403.555.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LPN2_ECTSI7.340e-10361.15Cir_N domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A836CIP7_9STRA3.150e-2943.95Cir_N domain-containing protein n=1 Tax=Tribonema ... [more]
A0A7S3XJL8_HETAK7.620e-1644.44Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A293M4V0_ORNER3.130e-831.58Cir_N domain-containing protein (Fragment) n=1 Tax... [more]
A0A2R5LJQ0_9ACAR3.130e-834.19Putative leukocyte receptor cluster member 1 (Frag... [more]
A0A0B2V8L9_TOXCA2.680e-736.25Leukocyte receptor cluster member 1-like protein n... [more]
UPI0014258B8D3.990e-636.54leukocyte receptor cluster member 1 homolog n=1 Ta... [more]
A0A815GZH2_9BILA6.410e-628.92Hypothetical protein n=3 Tax=Rotaria sordida TaxID... [more]
A0A7S3XLM5_HETAK3.870e-550.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9D443_9STRA8.700e-534.05Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 104..131
NoneNo IPR availableCOILSCoilCoilcoord: 18..48
IPR019339CBF1-interacting co-repressor CIR, N-terminal domainSMARTSM01083Cir_N_3coord: 12..48
e-value: 3.7E-5
score: 33.1
IPR019339CBF1-interacting co-repressor CIR, N-terminal domainPFAMPF10197Cir_Ncoord: 12..48
e-value: 4.5E-8
score: 33.1
IPR039875Leukocyte receptor cluster member 1-likePANTHERPTHR22093LEUKOCYTE RECEPTOR CLUSTER LRC MEMBER 1coord: 4..363

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10403contigP-canaliculata_contig10403:2255..4003 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10403.555.1mRNA_P-canaliculata_contig10403.555.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10403 2186..4265 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10403.555.1 ID=prot_P-canaliculata_contig10403.555.1|Name=mRNA_P-canaliculata_contig10403.555.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=366bp
MSGRLIILPKKSWHPGKRENIEKVLRDERVAAEEADEARERAREVTQEGI
VETLSKKRLLEGRKVKEEPASRKRRRPGEDQGENDGLGGKGQGWGETPQH
VNLFSEAEREAEKQLGQNADYQSEKQEEELRAQRRSGLAPTALGEGSAEM
KGEDSQPWYMQMNASAVVQNVAARTTRLGREVTGKEAVEALKRDEKRKNR
ADPLVSLFGSGSSLTIDRTSNENRTKVSLTPGDTLSADPRGLDGTSTQGD
RNKSSKKEKKHKHKHKKHKKSRSGRGRDKDSSRDARRGDSGAKAGDDEGS
TTDANQQQQLEDLRRRRLAREGGERERQIRLLAERQMVGLPFPDERRISY
NNLYNATAARQNRLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019339CIR_N_dom
IPR039875LENG1-like