mRNA_P-canaliculata_contig100029.51.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-canaliculata_contig100029.51.1
Unique Name	mRNA_P-canaliculata_contig100029.51.1
Type	mRNA
Organism	Pelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))

Homology

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BLAST of mRNA_P-canaliculata_contig100029.51.1 vs. uniprot
Match: A0A4Y7ZJD3_9GAMM (Chondroitin lyase n=3 Tax=unclassified Psychromonas TaxID=2614957 RepID=A0A4Y7ZJD3_9GAMM)

HSP 1 Score: 659 bits (1700), Expect = 5.480e-233
Identity = 313/344 (90.99%), Postives = 330/344 (95.93%), Query Frame = 1

Query:    1 RKHIVERLFEPMLEVATVKYHFDFDRIHNHGVWAVAATAACGAAIEQEKYIDLALHGLAGDDIQGGFLAQLSNLFAPSGYYIEGPYYHRYAIRPLCLLAELTQRFRPELDIFNFKGQVIGKTIQSLLSTAYPNGVFPSLNDASKSMDIKDEGVVIAVSLYAKHYPEDKNLYGIAKIQEQIWISGCGIALSQAYQAQENVNKPCLPSVQLNEGPNGDKGGQGFIRMQNEKGEISQLVMNYGQHGMGHGHFDTLGMTYFNSQQEVLRDYGFGRWVNIEPKFGGRYLDENKSYARQTIAHNLVSVDASCQNNFDVDTADNKHGTPHFFIGEGTIQAMSAYAIDFYPG 1032
            R+HIV +LFEPMLEVATVKYHFDFDRIHNHGVWAVAATAACGAAI QEKYIDLALHGLAGDDIQGGFLAQLSNLFAPSGYYIEGPYYHRYAIRPLC+LAELTQRFRPELDIFNFKGQVI KTIQSLLSTAYPNGVFPSLNDASKSM+IKDEGVVIAVSLYAKHYPED NL+GIAKIQEQIW+SGCG+ALSQAY+AQ +V  PCLPSV+LNEGP+GDKG QGFIRMQNE+G+ISQLVMNYGQHGMGHGHFDTLGMTYFN+ QEVLRDYGFGRWVN+EPKFGGRYLDENKSY+RQTIAHNLVSVDA CQNNFDV+TADNKHGTPHFFIG G  QAMSAYA DFYPG
Sbjct:  147 RQHIVGKLFEPMLEVATVKYHFDFDRIHNHGVWAVAATAACGAAIGQEKYIDLALHGLAGDDIQGGFLAQLSNLFAPSGYYIEGPYYHRYAIRPLCILAELTQRFRPELDIFNFKGQVIAKTIQSLLSTAYPNGVFPSLNDASKSMNIKDEGVVIAVSLYAKHYPEDTNLFGIAKIQEQIWVSGCGVALSQAYEAQVSVELPCLPSVELNEGPDGDKGAQGFIRMQNEQGDISQLVMNYGQHGMGHGHFDTLGMTYFNNNQEVLRDYGFGRWVNVEPKFGGRYLDENKSYSRQTIAHNLVSVDAGCQNNFDVETADNKHGTPHFFIGNGKTQAMSAYAYDFYPG 490

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BLAST of mRNA_P-canaliculata_contig100029.51.1 vs. uniprot
Match: A0A4Y7ZQ76_9GAMM (Chondroitin lyase (Fragment) n=4 Tax=Psychromonas TaxID=67572 RepID=A0A4Y7ZQ76_9GAMM)

HSP 1 Score: 657 bits (1695), Expect = 2.660e-232
Identity = 315/344 (91.57%), Postives = 328/344 (95.35%), Query Frame = 1

Query:    1 RKHIVERLFEPMLEVATVKYHFDFDRIHNHGVWAVAATAACGAAIEQEKYIDLALHGLAGDDIQGGFLAQLSNLFAPSGYYIEGPYYHRYAIRPLCLLAELTQRFRPELDIFNFKGQVIGKTIQSLLSTAYPNGVFPSLNDASKSMDIKDEGVVIAVSLYAKHYPEDKNLYGIAKIQEQIWISGCGIALSQAYQAQENVNKPCLPSVQLNEGPNGDKGGQGFIRMQNEKGEISQLVMNYGQHGMGHGHFDTLGMTYFNSQQEVLRDYGFGRWVNIEPKFGGRYLDENKSYARQTIAHNLVSVDASCQNNFDVDTADNKHGTPHFFIGEGTIQAMSAYAIDFYPG 1032
            R+HIV +LFEPMLEVATVKYHFDFDRIHNHGVWAVAATAACGAAI QEKYIDLALHGLAGDDIQGGFLAQLSNLFAPSGYYIEGPYYHRYAIRPLCLLAELTQRFRPELDIFNFKGQVI KTIQSLLSTAYPNGVFPSLND+SKSMDIKDEGVVIAVSLYAKHYPEDKNLYGIAKIQ QIW+SGCG ALSQAY+AQ +V  PCLPSV+LNEGP+GDKG QGFIRMQ   G+ISQLVMNYGQHGMGHGHFDTLGMTYFN+ QEVLRDYGFGRWVNIEPKFGGRYLDENKSYARQTIAHNLVSVDASCQNNFDVDTAD+KHG PHFF+GEG +QAMSAYA DFYPG
Sbjct:  142 REHIVGQLFEPMLEVATVKYHFDFDRIHNHGVWAVAATAACGAAIGQEKYIDLALHGLAGDDIQGGFLAQLSNLFAPSGYYIEGPYYHRYAIRPLCLLAELTQRFRPELDIFNFKGQVIAKTIQSLLSTAYPNGVFPSLNDSSKSMDIKDEGVVIAVSLYAKHYPEDKNLYGIAKIQAQIWVSGCGAALSQAYEAQASVALPCLPSVELNEGPDGDKGAQGFIRMQTTTGDISQLVMNYGQHGMGHGHFDTLGMTYFNNNQEVLRDYGFGRWVNIEPKFGGRYLDENKSYARQTIAHNLVSVDASCQNNFDVDTADSKHGIPHFFVGEGKVQAMSAYADDFYPG 485

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BLAST of mRNA_P-canaliculata_contig100029.51.1 vs. uniprot
Match: A0A366VZI5_9GAMM (Chondroitin lyase n=1 Tax=Psychromonas sp. B3M02 TaxID=2267226 RepID=A0A366VZI5_9GAMM)

HSP 1 Score: 655 bits (1690), Expect = 1.750e-231
Identity = 314/344 (91.28%), Postives = 328/344 (95.35%), Query Frame = 1

Query:    1 RKHIVERLFEPMLEVATVKYHFDFDRIHNHGVWAVAATAACGAAIEQEKYIDLALHGLAGDDIQGGFLAQLSNLFAPSGYYIEGPYYHRYAIRPLCLLAELTQRFRPELDIFNFKGQVIGKTIQSLLSTAYPNGVFPSLNDASKSMDIKDEGVVIAVSLYAKHYPEDKNLYGIAKIQEQIWISGCGIALSQAYQAQENVNKPCLPSVQLNEGPNGDKGGQGFIRMQNEKGEISQLVMNYGQHGMGHGHFDTLGMTYFNSQQEVLRDYGFGRWVNIEPKFGGRYLDENKSYARQTIAHNLVSVDASCQNNFDVDTADNKHGTPHFFIGEGTIQAMSAYAIDFYPG 1032
            R+HIV++LFEPMLEVATVKYHFDFDRIHNHGVWAVAATAACGAAI QEKYIDLALHGLAGDDIQGGFLAQLSNLFAPSGYYIEGPYYHRYAIRPLCLLAELTQRFRPELDIFNFK QVIGKTIQSLLSTAYPNGVFPSLNDASKSMDIKDEGVVIAVSLYAKHYPED NLYGIA IQEQIWISGCG+ALSQAYQAQ +V  PCLPSV+LNEGP+GDKG QGFIRMQN +G+ISQLVMNYGQHGMGHGHFDTLGMTYFN+ QEVLRDYGFGRWVNIEPKFGGRYLDENKSYARQTI HNLVSVDA CQN+FDV+ AD+KHG PHFFIGEG IQAMSA+A DFYPG
Sbjct:  147 RQHIVKQLFEPMLEVATVKYHFDFDRIHNHGVWAVAATAACGAAIGQEKYIDLALHGLAGDDIQGGFLAQLSNLFAPSGYYIEGPYYHRYAIRPLCLLAELTQRFRPELDIFNFKNQVIGKTIQSLLSTAYPNGVFPSLNDASKSMDIKDEGVVIAVSLYAKHYPEDTNLYGIANIQEQIWISGCGVALSQAYQAQASVEVPCLPSVELNEGPDGDKGAQGFIRMQNSQGDISQLVMNYGQHGMGHGHFDTLGMTYFNNDQEVLRDYGFGRWVNIEPKFGGRYLDENKSYARQTIVHNLVSVDAGCQNDFDVELADSKHGIPHFFIGEGKIQAMSAFAEDFYPG 490

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BLAST of mRNA_P-canaliculata_contig100029.51.1 vs. uniprot
Match: UPI0003B313FB (heparinase II/III family protein n=1 Tax=Psychromonas hadalis TaxID=211669 RepID=UPI0003B313FB)

HSP 1 Score: 590 bits (1520), Expect = 1.160e-205
Identity = 269/344 (78.20%), Postives = 310/344 (90.12%), Query Frame = 1

Query:    1 RKHIVERLFEPMLEVATVKYHFDFDRIHNHGVWAVAATAACGAAIEQEKYIDLALHGLAGDDIQGGFLAQLSNLFAPSGYYIEGPYYHRYAIRPLCLLAELTQRFRPELDIFNFKGQVIGKTIQSLLSTAYPNGVFPSLNDASKSMDIKDEGVVIAVSLYAKHYPEDKNLYGIAKIQEQIWISGCGIALSQAYQAQENVNKPCLPSVQLNEGPNGDKGGQGFIRMQNEKGEISQLVMNYGQHGMGHGHFDTLGMTYFNSQQEVLRDYGFGRWVNIEPKFGGRYLDENKSYARQTIAHNLVSVDASCQNNFDVDTADNKHGTPHFFIGEGTIQAMSAYAIDFYPG 1032
            R +I  RLF P+L+++TV+Y FDFDRIHNHG+WAVA+ A CGAAI QEKYID+++HGL GDD +GGFLAQ+S LFAPSGYY+EGPYYHRYAIRPL + AEL  RFRPELDIFNFK QVIGKTIQ++LSTAYPNGVFP+LNDAS++MDIKDEGVVIAVSL++KHYPED+NL G+AKIQ Q+W++GCG ALS+AY ++E+V  PCLPS++LNEG NGDKG QGFIRMQN  G+ISQLVMNYGQHGMGHGHFDTLG+TYFN+ QEVLR+YGF RWVN+EPKFGGRYLDENKSYARQTIAHNLVSVDA CQNNFDVD ADNKHG PHFF+G G +Q MSAYA+DFYPG
Sbjct:  147 RAYITARLFIPLLDMSTVQYDFDFDRIHNHGIWAVASVAICGAAIGQEKYIDMSIHGLKGDDEEGGFLAQISKLFAPSGYYMEGPYYHRYAIRPLAMFAELVHRFRPELDIFNFKDQVIGKTIQAMLSTAYPNGVFPALNDASQTMDIKDEGVVIAVSLFSKHYPEDENLLGMAKIQNQVWVNGCGTALSKAYASKESVEMPCLPSIELNEGRNGDKGAQGFIRMQNANGDISQLVMNYGQHGMGHGHFDTLGLTYFNNNQEVLREYGFARWVNVEPKFGGRYLDENKSYARQTIAHNLVSVDAGCQNNFDVDIADNKHGIPHFFVGSGKVQGMSAYAVDFYPG 490

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BLAST of mRNA_P-canaliculata_contig100029.51.1 vs. uniprot
Match: UPI0003B67D40 (heparinase II/III family protein n=1 Tax=Leucothrix mucor TaxID=45248 RepID=UPI0003B67D40)

HSP 1 Score: 589 bits (1518), Expect = 2.120e-205
Identity = 276/344 (80.23%), Postives = 307/344 (89.24%), Query Frame = 1

Query:    1 RKHIVERLFEPMLEVATVKYHFDFDRIHNHGVWAVAATAACGAAIEQEKYIDLALHGLAGDDIQGGFLAQLSNLFAPSGYYIEGPYYHRYAIRPLCLLAELTQRFRPELDIFNFKGQVIGKTIQSLLSTAYPNGVFPSLNDASKSMDIKDEGVVIAVSLYAKHYPEDKNLYGIAKIQEQIWISGCGIALSQAYQAQENVNKPCLPSVQLNEGPNGDKGGQGFIRMQNEKGEISQLVMNYGQHGMGHGHFDTLGMTYFNSQQEVLRDYGFGRWVNIEPKFGGRYLDENKSYARQTIAHNLVSVDASCQNNFDVDTADNKHGTPHFFIGEGTIQAMSAYAIDFYPG 1032
            R+HI+ERLFEPMLEVATVKY   +D IHNHGVWAVA  AA G A  QEKYID ALHGLAGDD+ GGFLAQ+SNLFAPSGYYIEGPYYHRYAIRPLC+LAE+TQR RPE+DIFNFK QVI KTIQ+LLSTAYPNGVFP+LND+S+SMDI DEGVVIAVSLYAKHYPEDKNLYGIAKIQ Q+W+SGCG+ALSQAY+AQ++V  PCLPSV+LNEGPNGDKG QGFIRMQN +G+ISQLVM YGQHGMGHGHFDTLG+TYFN+ QEVLR+YG+GRW+N+EPKFGGRYL EN SYARQTIAHN+V+VD S QNN D D  D+KH  PHFFIG G  QAMSA+A DFYPG
Sbjct:  147 RQHIIERLFEPMLEVATVKYSDKYDTIHNHGVWAVAGVAAMGVACGQEKYIDQALHGLAGDDVTGGFLAQISNLFAPSGYYIEGPYYHRYAIRPLCVLAEITQRLRPEIDIFNFKDQVIRKTIQALLSTAYPNGVFPALNDSSQSMDITDEGVVIAVSLYAKHYPEDKNLYGIAKIQNQVWVSGCGVALSQAYEAQDSVELPCLPSVELNEGPNGDKGAQGFIRMQNAEGDISQLVMAYGQHGMGHGHFDTLGLTYFNNNQEVLREYGYGRWINVEPKFGGRYLAENASYARQTIAHNVVAVDGSSQNNSDCDIGDSKHAVPHFFIGTGNTQAMSAFAHDFYPG 490

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BLAST of mRNA_P-canaliculata_contig100029.51.1 vs. uniprot
Match: A0A2N0WWN7_9GAMM (Chondroitin lyase n=1 Tax=Psychromonas sp. psych-6C06 TaxID=2058089 RepID=A0A2N0WWN7_9GAMM)

HSP 1 Score: 576 bits (1485), Expect = 2.120e-200
Identity = 260/344 (75.58%), Postives = 310/344 (90.12%), Query Frame = 1

Query:    1 RKHIVERLFEPMLEVATVKYHFDFDRIHNHGVWAVAATAACGAAIEQEKYIDLALHGLAGDDIQGGFLAQLSNLFAPSGYYIEGPYYHRYAIRPLCLLAELTQRFRPELDIFNFKGQVIGKTIQSLLSTAYPNGVFPSLNDASKSMDIKDEGVVIAVSLYAKHYPEDKNLYGIAKIQEQIWISGCGIALSQAYQAQENVNKPCLPSVQLNEGPNGDKGGQGFIRMQNEKGEISQLVMNYGQHGMGHGHFDTLGMTYFNSQQEVLRDYGFGRWVNIEPKFGGRYLDENKSYARQTIAHNLVSVDASCQNNFDVDTADNKHGTPHFFIGEGTIQAMSAYAIDFYPG 1032
            R+ I+ RLF P+L+++TV+Y FDFDRIHNHG+WAVA+ A CGAAI Q+KYID+++HGL GDD +GGFLAQ+S LFAPSGYY+EGPYYHRYAIRPL + AEL  RFRPELDIFNFK QVIGKTIQ++LSTAYPNGVFP+LNDASK+MDIKDEGV+IA+SL+AKHYPE++N+ G+AKIQE++W++GCG+ LS+AY+A+  +  PCLPSV+LNEG +GDKG QGFIRMQN  G+ISQLVMNYGQHGM HGHFDTLG+TYFN+ QEVLR+YGFGRWVN+EPKFGGRYLDENKSYARQTIAHNLV+VDA CQN+FD++TA+ KHG PHFFIG G +Q MSAYA DFYPG
Sbjct:  147 RQEIIARLFIPLLDMSTVQYDFDFDRIHNHGIWAVASVAICGAAIGQDKYIDMSIHGLKGDDEEGGFLAQISKLFAPSGYYMEGPYYHRYAIRPLAMFAELVHRFRPELDIFNFKDQVIGKTIQAMLSTAYPNGVFPALNDASKTMDIKDEGVIIALSLFAKHYPENENILGMAKIQERVWVNGCGLVLSKAYEAKNKIEMPCLPSVELNEGRDGDKGAQGFIRMQNNTGDISQLVMNYGQHGMDHGHFDTLGLTYFNNNQEVLREYGFGRWVNVEPKFGGRYLDENKSYARQTIAHNLVTVDAGCQNSFDINTAEAKHGEPHFFIGNGNLQGMSAYAHDFYPG 490

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BLAST of mRNA_P-canaliculata_contig100029.51.1 vs. uniprot
Match: A0A317CE49_9GAMM (Chondroitin lyase n=1 Tax=Leucothrix arctica TaxID=1481894 RepID=A0A317CE49_9GAMM)

HSP 1 Score: 571 bits (1472), Expect = 1.970e-198
Identity = 265/344 (77.03%), Postives = 305/344 (88.66%), Query Frame = 1

Query:    1 RKHIVERLFEPMLEVATVKYHFDFDRIHNHGVWAVAATAACGAAIEQEKYIDLALHGLAGDDIQGGFLAQLSNLFAPSGYYIEGPYYHRYAIRPLCLLAELTQRFRPELDIFNFKGQVIGKTIQSLLSTAYPNGVFPSLNDASKSMDIKDEGVVIAVSLYAKHYPEDKNLYGIAKIQEQIWISGCGIALSQAYQAQENVNKPCLPSVQLNEGPNGDKGGQGFIRMQNEKGEISQLVMNYGQHGMGHGHFDTLGMTYFNSQQEVLRDYGFGRWVNIEPKFGGRYLDENKSYARQTIAHNLVSVDASCQNNFDVDTADNKHGTPHFFIGEGTIQAMSAYAIDFYPG 1032
            R+HI+ +LFEPMLEVATVKY  DFDRIHNHGVWAVA  AA GAAI QEKYIDL++HGL  DD+ GGFLAQ+S LFAPSGYYIEGPYYHRYAIRPLCLLAE+TQR+RPELDIFNFKGQVIGKTIQ++LS+AYPNGVFP+LNDASK+M   DEGVV AVSLYAKHYPEDKN+YGIAK+Q ++W+SGCG ALS++Y+AQ+NV  PCLPSV+LNEGPNGD+G Q FIR QN  G+ISQ+VM YGQHGMGHG+FD LGMT+FN+ QEVLR+YG+GRWVN+E KFGGRYLDENKSYARQTIAHNLV+VD  CQN+F+V  AD+KH  PHFF G   IQA+SA+A D+YPG
Sbjct:  147 RQHIITKLFEPMLEVATVKYDHDFDRIHNHGVWAVAGVAAIGAAIGQEKYIDLSIHGLLNDDVTGGFLAQISKLFAPSGYYIEGPYYHRYAIRPLCLLAEITQRYRPELDIFNFKGQVIGKTIQAMLSSAYPNGVFPALNDASKTMGYSDEGVVTAVSLYAKHYPEDKNIYGIAKLQGRLWVSGCGAALSESYEAQDNVELPCLPSVELNEGPNGDRGAQAFIRSQNANGDISQVVMAYGQHGMGHGNFDGLGMTFFNNNQEVLREYGYGRWVNVEHKFGGRYLDENKSYARQTIAHNLVTVDEKCQNDFNVKLADSKHCEPHFFTGNAPIQAVSAFARDYYPG 490

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BLAST of mRNA_P-canaliculata_contig100029.51.1 vs. uniprot
Match: A0A418YHX2_9GAMM (Chondroitin lyase n=1 Tax=Motilimonas pumila TaxID=2303987 RepID=A0A418YHX2_9GAMM)

HSP 1 Score: 548 bits (1413), Expect = 1.740e-189
Identity = 250/345 (72.46%), Postives = 307/345 (88.99%), Query Frame = 1

Query:    1 RKHIVERLFEPMLEVATVKYHFDFDRIHNHGVWAVAATAACGAAIEQEKYIDLALHGLAGDDIQGGFLAQLSNLFAPSGYYIEGPYYHRYAIRPLCLLAELTQRFRPELDIFNFKGQVIGKTIQSLLSTAYPNGVFPSLNDASKSMDIKDEGVVIAVSLYAKHYPEDKNLYGIAKIQEQIWISGCGIALSQAYQAQENVNKPCLPSVQLNEGPNGDKGGQGFIRMQNEKGEISQLVMNYGQHGMGHGHFDTLGMTYFNSQQEVLRDYGFGRWVNIEPKFGGRYLDENKSYARQTIAHNLVSVDASCQNNFDVDTADNKHGTPHFFIGEGT-IQAMSAYAIDFYPG 1032
            R+HI++ LF+PML++ T+KY FDFDRIHNHG+WAVAA A CG A  Q+KY+++++HGLAGDD +GGFLAQ+S LFAPSGYY+EGPYYHRYAIRPLCL AEL  R+RPELDIFNFK QVIGKTI+++L+TAYPNGVFP+LNDAS +MDIKD GV++AVSLYAKHYP+D NL G+AKIQ+Q+W++ CG+ALS+AY+AQ +V  P  PSV+LNEGPNGD+GGQ F+RM+N + +ISQL MNYGQHGMGHGHFDTLG+++FN+ QEVLR+YGFGRWVN+EPKFGGRYLDENKSYARQTIAHNLVS+D+SCQN+FDV  AD++HGTPHFF G+   +Q +SA A +FYPG
Sbjct:  147 RQHIIDGLFQPMLDMFTIKYDFDFDRIHNHGLWAVAAVAICGVATGQDKYVEMSIHGLAGDDEKGGFLAQISQLFAPSGYYMEGPYYHRYAIRPLCLFAELVHRYRPELDIFNFKDQVIGKTIKAMLATAYPNGVFPALNDASLTMDIKDAGVIVAVSLYAKHYPQDINLLGMAKIQQQVWVNSCGLALSKAYEAQ-SVPMPFWPSVELNEGPNGDRGGQAFLRMKNAQQDISQLAMNYGQHGMGHGHFDTLGISFFNNGQEVLREYGFGRWVNVEPKFGGRYLDENKSYARQTIAHNLVSIDSSCQNDFDVALADSRHGTPHFFSGDSECVQGVSAIAKEFYPG 490

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BLAST of mRNA_P-canaliculata_contig100029.51.1 vs. uniprot
Match: A0A6S6TSU7_9GAMM (Poly(Beta-D-mannuronate) lyase (EC) n=1 Tax=uncultured Thiotrichaceae bacterium TaxID=298394 RepID=A0A6S6TSU7_9GAMM)

HSP 1 Score: 541 bits (1395), Expect = 8.390e-187
Identity = 255/344 (74.13%), Postives = 295/344 (85.76%), Query Frame = 1

Query:    1 RKHIVERLFEPMLEVATVKYHFDFDRIHNHGVWAVAATAACGAAIEQEKYIDLALHGLAGDDIQGGFLAQLSNLFAPSGYYIEGPYYHRYAIRPLCLLAELTQRFRPELDIFNFKGQVIGKTIQSLLSTAYPNGVFPSLNDASKSMDIKDEGVVIAVSLYAKHYPEDKNLYGIAKIQEQIWISGCGIALSQAYQAQENVNKPCLPSVQLNEGPNGDKGGQGFIRMQNEKGEISQLVMNYGQHGMGHGHFDTLGMTYFNSQQEVLRDYGFGRWVNIEPKFGGRYLDENKSYARQTIAHNLVSVDASCQNNFDVDTADNKHGTPHFFIGEGTIQAMSAYAIDFYPG 1032
            ++HI+ RLFEPMLEV T KY   FD IHNHG+W+VA  AACGAAI QEKYIDLAL+GLAGD  + GFLAQL  LFAPSGYYIEGPYYHRYAIRPLC++AELT RFRPE+DI+N K QV+ KTIQ+LLSTAYPNGVFP+LNDASKSM+I+DEGV+IA S+YAKHY  D+N+ GIA++Q QIW+SGCG AL+ +Y A   V  PCLPS++L EGP+GDKG QGFIRMQN+ G+ISQLVM YGQHGM HGHFDTLG+++FN+ QEVL DYG+GRWVN+EPKFGGRYL ENKSYARQTIAHNLV+VD  CQN FD+D  +N H TPHFFIGEGT QAMSAYA D+YPG
Sbjct:  147 QQHIISRLFEPMLEVITEKYAHHFDTIHNHGIWSVAGAAACGAAIGQEKYIDLALNGLAGDG-EKGFLAQLHKLFAPSGYYIEGPYYHRYAIRPLCVMAELTHRFRPEVDIYNVKEQVLEKTIQALLSTAYPNGVFPALNDASKSMNIEDEGVLIAASVYAKHYTADQNILGIARLQGQIWVSGCGAALADSYAAAPAVELPCLPSIELAEGPDGDKGAQGFIRMQNQDGDISQLVMAYGQHGMDHGHFDTLGISFFNNNQEVLCDYGYGRWVNVEPKFGGRYLPENKSYARQTIAHNLVTVDEGCQNKFDMDLGNNMHATPHFFIGEGTTQAMSAYAHDYYPG 489

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BLAST of mRNA_P-canaliculata_contig100029.51.1 vs. uniprot
Match: R9PSG2_AGAAL (Poly(Beta-D-mannuronate) lyase n=5 Tax=Agarivorans TaxID=261825 RepID=R9PSG2_AGAAL)

HSP 1 Score: 525 bits (1352), Expect = 2.950e-180
Identity = 240/344 (69.77%), Postives = 293/344 (85.17%), Query Frame = 1

Query:    4 KHIVERLFEPMLEVATVKYHFDFDRIHNHGVWAVAATAACGAAIEQEKYIDLALHGLAGDDIQGGFLAQLSNLFAPSGYYIEGPYYHRYAIRPLCLLAELTQRFRPELDIFNFKGQVIGKTIQSLLSTAYPNGVFPSLNDASKSMDIKDEGVVIAVSLYAKHYPEDKNLYGIAKIQEQIWISGCGIALSQAYQAQENVNKPCLPSVQLNEGPNGDKGGQGFIRMQNEKGEISQLVMNYGQHGMGHGHFDTLGMTYFNSQQEVLRDYGFGRWVNIEPKFGGRYLDENKSYARQTIAHNLVSVDASCQNNFDVDTADNKHGTPHFFIGEGT-IQAMSAYAIDFYPG 1032
            KHI  +LF+PML++ T KY FDFDRIHNHG+WAVAA   CG AI + +Y+++++HGL GDD+ GGFLAQ+S LFAPSGYY+EGPYYHRYAIRPLCL AE+  R RPELDIFN+K QVIGKTI+++L+TAYPNGVFP+LNDAS +MDIKD+GVV+AVSL  KHY  D+ L G+AKIQ+Q+W+ GCG ALS+AYQ   N   P  PSV+LNEGPNGD+G QGF+RMQ++ G++SQLVMNYGQHGMGHGHFDTLG+++FN  QEVL++YGFGRWVN+EPKFGGRYLDENKSYARQT+AHN V+VD +CQNNFDV+ AD+KHG PHFF      +QA+SA+A +FYPG
Sbjct:  148 KHIESQLFQPMLDMFTDKYGFDFDRIHNHGLWAVAAVGICGLAIGKPEYVEMSVHGLKGDDVTGGFLAQISQLFAPSGYYMEGPYYHRYAIRPLCLFAEVLHRHRPELDIFNYKDQVIGKTIKAMLATAYPNGVFPALNDASLTMDIKDQGVVVAVSLAYKHYGHDEKLLGMAKIQQQVWLHGCGAALSKAYQDSTNTALPHWPSVELNEGPNGDRGAQGFVRMQSKDGDVSQLVMNYGQHGMGHGHFDTLGISFFNRGQEVLKEYGFGRWVNVEPKFGGRYLDENKSYARQTVAHNAVAVDQACQNNFDVELADSKHGIPHFFESSNQDLQAVSAFAEEFYPG 491

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig100029.51.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig100029.51.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A4Y7ZJD3_9GAMM	5.480e-233	90.99	Chondroitin lyase n=3 Tax=unclassified Psychromona...	[more]
A0A4Y7ZQ76_9GAMM	2.660e-232	91.57	Chondroitin lyase (Fragment) n=4 Tax=Psychromonas ...	[more]
A0A366VZI5_9GAMM	1.750e-231	91.28	Chondroitin lyase n=1 Tax=Psychromonas sp. B3M02 T...	[more]
UPI0003B313FB	1.160e-205	78.20	heparinase II/III family protein n=1 Tax=Psychromo...	[more]
UPI0003B67D40	2.120e-205	80.23	heparinase II/III family protein n=1 Tax=Leucothri...	[more]
A0A2N0WWN7_9GAMM	2.120e-200	75.58	Chondroitin lyase n=1 Tax=Psychromonas sp. psych-6...	[more]
A0A317CE49_9GAMM	1.970e-198	77.03	Chondroitin lyase n=1 Tax=Leucothrix arctica TaxID...	[more]
A0A418YHX2_9GAMM	1.740e-189	72.46	Chondroitin lyase n=1 Tax=Motilimonas pumila TaxID...	[more]
A0A6S6TSU7_9GAMM	8.390e-187	74.13	Poly(Beta-D-mannuronate) lyase (EC) n=1 Tax=uncult...	[more]
R9PSG2_AGAAL	2.950e-180	69.77	Poly(Beta-D-mannuronate) lyase n=5 Tax=Agarivorans...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-canaliculata_contig100029	contig	P-canaliculata_contig100029:3..1034 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Pelvetia canaliculata dioecious	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Bacteria
Seed ortholog score	594.7
Seed ortholog evalue	2.7e-167
Seed eggNOG ortholog	998674.ATTE01000001_gene1930
Preferred name	alyll
KEGG ko	ko:K20525
EggNOG free text desc.	polysaccharide catabolic process
EggNOG OGs	1MVUK@1224,1RQN9@1236,28HPB@1,2Z7XC@2
EC	4.2.2.26
COG Functional cat.	S
Best tax level	Gammaproteobacteria
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko01000
Hectar predicted targeting category	other localisation
Exons	1
Model size	1032
Cds size	1032
Stop	0
Start	0

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622815573.4438272-CDS-P-canaliculata_contig100029:2..1034	1622815573.4438272-CDS-P-canaliculata_contig100029:2..1034	Pelvetia canaliculata dioecious	CDS	P-canaliculata_contig100029 3..1034 +
1693494144.4887354-CDS-P-canaliculata_contig100029:2..1034	1693494144.4887354-CDS-P-canaliculata_contig100029:2..1034	Pelvetia canaliculata dioecious	CDS	P-canaliculata_contig100029 3..1034 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-canaliculata_contig100029.51.1	prot_P-canaliculata_contig100029.51.1	Pelvetia canaliculata dioecious	polypeptide	P-canaliculata_contig100029 3..1034 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-canaliculata_contig100029:3..1034+
coding sequence from alignment at P-canaliculata_contig100029:3..1034+

protein sequence of mRNA_P-canaliculata_contig100029.51.1

>prot_P-canaliculata_contig100029.51.1 ID=prot_P-canaliculata_contig100029.51.1|Name=mRNA_P-canaliculata_contig100029.51.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=344bp
RKHIVERLFEPMLEVATVKYHFDFDRIHNHGVWAVAATAACGAAIEQEKY
IDLALHGLAGDDIQGGFLAQLSNLFAPSGYYIEGPYYHRYAIRPLCLLAE
LTQRFRPELDIFNFKGQVIGKTIQSLLSTAYPNGVFPSLNDASKSMDIKD
EGVVIAVSLYAKHYPEDKNLYGIAKIQEQIWISGCGIALSQAYQAQENVN
KPCLPSVQLNEGPNGDKGGQGFIRMQNEKGEISQLVMNYGQHGMGHGHFD
TLGMTYFNSQQEVLRDYGFGRWVNIEPKFGGRYLDENKSYARQTIAHNLV
SVDASCQNNFDVDTADNKHGTPHFFIGEGTIQAMSAYAIDFYPG

mRNA from alignment at P-canaliculata_contig100029:3..1034+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-canaliculata_contig100029.51.1 ID=mRNA_P-canaliculata_contig100029.51.1|Name=mRNA_P-canaliculata_contig100029.51.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1032bp|location=Sequence derived from alignment at P-canaliculata_contig100029:3..1034+ (Pelvetia canaliculata dioecious)
AGAAAGCATATTGTAGAACGTTTATTCGAGCCGATGTTAGAAGTCGCTAC
AGTAAAGTACCACTTTGATTTTGACCGCATTCATAACCACGGTGTTTGGG
CAGTGGCAGCAACCGCAGCTTGTGGCGCCGCGATTGAACAAGAAAAATAT
ATTGATTTAGCATTACACGGCTTAGCAGGCGATGATATTCAAGGTGGTTT
TCTTGCACAACTAAGCAATTTATTTGCTCCTTCTGGTTATTACATTGAAG
GTCCTTACTACCATCGTTACGCTATTCGCCCATTATGTTTACTTGCTGAA
TTGACACAACGCTTCCGTCCTGAATTAGATATTTTTAACTTCAAAGGACA
AGTGATTGGTAAAACGATCCAATCTTTATTATCAACCGCTTATCCAAACG
GTGTATTCCCATCATTAAACGATGCTTCAAAAAGTATGGATATCAAAGAT
GAAGGGGTTGTGATTGCGGTTAGCTTATACGCTAAGCATTATCCAGAAGA
TAAAAACTTATACGGTATTGCTAAAATCCAAGAGCAAATTTGGATAAGTG
GTTGTGGTATTGCTTTATCACAAGCTTATCAAGCACAAGAAAATGTCAAT
AAACCTTGTTTACCAAGTGTGCAATTGAATGAAGGTCCAAATGGCGATAA
AGGCGGACAAGGTTTCATCCGGATGCAAAACGAGAAAGGTGAGATTAGCC
AATTGGTGATGAATTATGGTCAACATGGTATGGGTCACGGTCACTTTGAT
ACATTAGGCATGACTTATTTTAACAGTCAGCAAGAGGTGTTACGTGATTA
TGGTTTTGGTCGTTGGGTAAATATCGAGCCTAAATTCGGCGGACGTTACC
TTGATGAGAATAAATCTTACGCTCGCCAAACAATCGCGCACAATTTAGTC
TCAGTCGATGCAAGTTGTCAGAATAACTTTGATGTGGACACCGCTGATAA
TAAACATGGTACGCCACACTTCTTTATTGGCGAAGGCACCATACAAGCAA
TGAGTGCTTATGCTATTGATTTTTACCCAGGT

Coding sequence (CDS) from alignment at P-canaliculata_contig100029:3..1034+

>mRNA_P-canaliculata_contig100029.51.1 ID=mRNA_P-canaliculata_contig100029.51.1|Name=mRNA_P-canaliculata_contig100029.51.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2064bp|location=Sequence derived from alignment at P-canaliculata_contig100029:3..1034+ (Pelvetia canaliculata dioecious)
AGAAAGCATATTGTAGAACGTTTATTCGAGCCGATGTTAGAAGTCGCTAC
AGTAAAGTACCACTTTGATTTTGACCGCATTCATAACCACGGTGTTTGGG
CAGTGGCAGCAACCGCAGCTTGTGGCGCCGCGATTGAACAAGAAAAATAT
ATTGATTTAGCATTACACGGCTTAGCAGGCGATGATATTCAAGGTGGTTT
TCTTGCACAACTAAGCAATTTATTTGCTCCTTCTGGTTATTACATTGAAG
GTCCTTACTACCATCGTTACGCTATTCGCCCATTATGTTTACTTGCTGAA
TTGACACAACGCTTCCGTCCTGAATTAGATATTTTTAACTTCAAAGGACA
AGTGATTGGTAAAACGATCCAATCTTTATTATCAACCGCTTATCCAAACG
GTGTATTCCCATCATTAAACGATGCTTCAAAAAGTATGGATATCAAAGAT
GAAGGGGTTGTGATTGCGGTTAGCTTATACGCTAAGCATTATCCAGAAGA
TAAAAACTTATACGGTATTGCTAAAATCCAAGAGCAAATTTGGATAAGTG
GTTGTGGTATTGCTTTATCACAAGCTTATCAAGCACAAGAAAATGTCAAT
AAACCTTGTTTACCAAGTGTGCAATTGAATGAAGGTCCAAATGGCGATAA
AGGCGGACAAGGTTTCATCCGGATGCAAAACGAGAAAGGTGAGATTAGCC
AATTGGTGATGAATTATGGTCAACATGGTATGGGTCACGGTCACTTTGAT
ACATTAGGCATGACTTATTTTAACAGTCAGCAAGAGGTGTTACGTGATTA
TGGTTTTGGTCGTTGGGTAAATATCGAGCCTAAATTCGGCGGACGTTACC
TTGATGAGAATAAATCTTACGCTCGCCAAACAATCGCGCACAATTTAGTC
TCAGTCGATGCAAGTTGTCAGAATAACTTTGATGTGGACACCGCTGATAA
TAAACATGGTACGCCACACTTCTTTATTGGCGAAGGCACCATACAAGCAA
TGAGTGCTTATGCTATTGATTTTTACCCAGGTAGAAAGCATATTGTAGAA
CGTTTATTCGAGCCGATGTTAGAAGTCGCTACAGTAAAGTACCACTTTGA
TTTTGACCGCATTCATAACCACGGTGTTTGGGCAGTGGCAGCAACCGCAG
CTTGTGGCGCCGCGATTGAACAAGAAAAATATATTGATTTAGCATTACAC
GGCTTAGCAGGCGATGATATTCAAGGTGGTTTTCTTGCACAACTAAGCAA
TTTATTTGCTCCTTCTGGTTATTACATTGAAGGTCCTTACTACCATCGTT
ACGCTATTCGCCCATTATGTTTACTTGCTGAATTGACACAACGCTTCCGT
CCTGAATTAGATATTTTTAACTTCAAAGGACAAGTGATTGGTAAAACGAT
CCAATCTTTATTATCAACCGCTTATCCAAACGGTGTATTCCCATCATTAA
ACGATGCTTCAAAAAGTATGGATATCAAAGATGAAGGGGTTGTGATTGCG
GTTAGCTTATACGCTAAGCATTATCCAGAAGATAAAAACTTATACGGTAT
TGCTAAAATCCAAGAGCAAATTTGGATAAGTGGTTGTGGTATTGCTTTAT
CACAAGCTTATCAAGCACAAGAAAATGTCAATAAACCTTGTTTACCAAGT
GTGCAATTGAATGAAGGTCCAAATGGCGATAAAGGCGGACAAGGTTTCAT
CCGGATGCAAAACGAGAAAGGTGAGATTAGCCAATTGGTGATGAATTATG
GTCAACATGGTATGGGTCACGGTCACTTTGATACATTAGGCATGACTTAT
TTTAACAGTCAGCAAGAGGTGTTACGTGATTATGGTTTTGGTCGTTGGGT
AAATATCGAGCCTAAATTCGGCGGACGTTACCTTGATGAGAATAAATCTT
ACGCTCGCCAAACAATCGCGCACAATTTAGTCTCAGTCGATGCAAGTTGT
CAGAATAACTTTGATGTGGACACCGCTGATAATAAACATGGTACGCCACA
CTTCTTTATTGGCGAAGGCACCATACAAGCAATGAGTGCTTATGCTATTG
ATTTTTACCCAGGT