prot_P-canaliculata_contig9941.24054.1 (polypeptide) Pelvetia canaliculata dioecious
You are viewing a polypeptide, more information available on the corresponding mRNA page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig9941.24054.1 vs. uniprot
Match: D7G9B5_ECTSI (PPR_long domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B5_ECTSI) HSP 1 Score: 287 bits (734), Expect = 2.970e-84 Identity = 212/338 (62.72%), Postives = 241/338 (71.30%), Query Frame = 0 Query: 1 SLLLYKVVAGAAVAGKWASHGRPLVERMESVGVPSREVRSWTAVLLPLSRLGCADACLEVLAMMDSVLGVEHAA-------PNGSGDRDRRHSRADSRRVL--------------LDRQEALLTVAHNHCMYAYIKAGRGAFRPLSPSQNRSTDRLIDRSQRADTYCYVSAMKALGAAGLWEAAVTLLQELRDLEGVAPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGEWERAVQELEAAEEDDLPVSTPAFNAALKAFAIAKALKPGLDFFRRMQEEGRIPLDEQTYNIAIELCKECGDTSKALGILRSMSAAG 317 +L + KV AGAAVAG+W +HGRPLV RM S+GVP +V SWTAVLLPLSRLGCAD CLEVL +M+ +G+ A P+ G + + L LDR+ LLTVAHNHCM+A+IKAGR P P R I + +ADTY YV+AMKA+GAAG WE AV+LL ELR+LEGV+P XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXX VQEL AAEE LPVSTPA+NAALKAFAI KAL+PGLDFFRRMQEEGR+PLDEQT+NIAIELCKECGDTS A+GILR+M AG Sbjct: 473 ALRMGKVAAGAAVAGRWETHGRPLVLRMGSLGVPEGDVSSWTAVLLPLSRLGCADECLEVLEIMEGAVGLTTATAAATPGVPHSGGRNGSAAPTGEEKHALGVAPREHGMDFFHGLDRRNELLTVAHNHCMFAFIKAGRETIPPPPPFPPRDPPSTI--TCKADTYTYVTAMKAVGAAGQWEIAVSLLAELRELEGVSPXXXXXXXXXXXXXXXXXXXXXXXXXGEMRRRGXXXXXXXXXXXXXXXXXXXXXX-XXVQELIAAEEGGLPVSTPAYNAALKAFAIGKALQPGLDFFRRMQEEGRVPLDEQTHNIAIELCKECGDTSTAVGILRAMEGAG 807
BLAST of mRNA_P-canaliculata_contig9941.24054.1 vs. uniprot
Match: A0A6H5KZI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZI4_9PHAE) HSP 1 Score: 246 bits (629), Expect = 3.770e-70 Identity = 212/400 (53.00%), Postives = 238/400 (59.50%), Query Frame = 0 Query: 8 VAGAAVAGKWASHGRPLVERMESVGVPSREVRSWTAVLLPLSRLGCADACLEVLAMMDSVLGVEHAAP------------NGSGDRDRRHSRADSRRVL--------LDRQEALLTVAHNHCMYAYIKAGR----------------------------------GAFRP-----------------LSPS-----------QNRSTDR--------LIDRSQRADTYCYVSAMKALGAAGLWEAAVTLLQELRDLEGVAPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGEWERAVQELEAAEEDDLPVSTPAFNAALKAFAIAKALKPGLDFFRRMQEEGRIPLDEQTYNIAIELCKECGDTSKALGILRSMSAAG 317 V+GAAVAG+W +HGRPLV RM S+GV +V SWTAVLLPLSRLGCAD CLEVL +M+ +G+ AA NGS A +L LDR+ LLTVAHNHCM+A+IKAGR GA RP LSP Q DR + R +ADTY YV+AMKA+GAAG WE AV+LL ELR+LE XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXX EL AAEE LPVSTPA+NAALKAFAI KAL+PGL+FFRRMQEEGR+PLDEQT+NIAIELCKECGDTS A+GILR+M AG Sbjct: 359 VSGAAVAGRWETHGRPLVLRMGSLGVSEGDVSSWTAVLLPLSRLGCADECLEVLEIMEGAVGLTTAAATATPGVPRSGRRNGSAAPTGGEKHALGAALLDGMDFFHDLDRRNELLTVAHNHCMFAFIKAGRHEEAVKHFDTYFRRPQPADVTSWTHHGTGTVKGQGAGRPWDGSEPDPCGVEHDESVLSPDIFSYTHLMSSLQKLGRDRACLSALYEMRARGIKADTYTYVTAMKAVGAAGQWEIAVSLLAELRELEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEMRRRGXXXXXXXXXXXXXXXXXXXXXXXXXQVELIAAEEGGLPVSTPAYNAALKAFAIGKALQPGLEFFRRMQEEGRVPLDEQTHNIAIELCKECGDTSTAVGILRTMEGAG 758 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9941.24054.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2 ZOOMx 1POSITION0
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-canaliculata_contig9941.24054.1 ID=prot_P-canaliculata_contig9941.24054.1|Name=mRNA_P-canaliculata_contig9941.24054.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=317bpback to top |