prot_P-canaliculata_contig99188.24035.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig99188.24035.1
Unique Nameprot_P-canaliculata_contig99188.24035.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length111
Homology
BLAST of mRNA_P-canaliculata_contig99188.24035.1 vs. uniprot
Match: A0A143ZEA5_9HYPH (Addiction module toxin, RelE/StbE family n=6 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A143ZEA5_9HYPH)

HSP 1 Score: 58.9 bits (141), Expect = 4.280e-9
Identity = 37/92 (40.22%), Postives = 56/92 (60.87%), Query Frame = 0
Query:    8 IRYAEAALAQLDEIADYIAGEGQPEAARTLLLRSATLVDSLSRFPLSGHRYETSHPRLQQIRIIAVPGYNVLIYHEVTDDHVFIHAVLSGSR 99
            +RY   A+  L+ +ADYI G   P+ AR ++ R  TL++ L   P +G R  T  P ++  R+IA+P Y  LI++E+T+  + IHAV  GSR
Sbjct:    3 LRYTRPAMIDLENVADYI-GARSPQGARRVMQRIKTLIEQLQDQPSAGAR--TQDPPIR--RLIALP-YPYLIFYEITEAEIVIHAVRHGSR 88          
BLAST of mRNA_P-canaliculata_contig99188.24035.1 vs. uniprot
Match: A0A537S1H4_9PROT (Type II toxin-antitoxin system RelE/ParE family toxin n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537S1H4_9PROT)

HSP 1 Score: 57.0 bits (136), Expect = 2.410e-8
Identity = 37/92 (40.22%), Postives = 50/92 (54.35%), Query Frame = 0
Query:    8 IRYAEAALAQLDEIADYIAGEGQPEAARTLLLRSATLVDSLSRFPLSGHRYETSHPRLQQIRIIAVPGYNVLIYHEVTDDHVFIHAVLSGSR 99
            +RY   ALA LD+I DYI     P+ AR +  R   ++D L ++P  G    T+ P    IR I  P Y  LI++EV  D + IHAV  G+R
Sbjct:    3 LRYTLPALADLDQILDYIVSRS-PQGARNVQARIRAVIDLLVQYPYVGT--PTADP---SIRRITTPPYPYLIFYEVAGDEIVIHAVRHGAR 88          
BLAST of mRNA_P-canaliculata_contig99188.24035.1 vs. uniprot
Match: A0A4R1X507_9HYPH (Plasmid stabilization system protein ParE n=1 Tax=Rhizobium sp. PP-F2F-G48 TaxID=2135651 RepID=A0A4R1X507_9HYPH)

HSP 1 Score: 53.1 bits (126), Expect = 6.160e-7
Identity = 33/85 (38.82%), Postives = 53/85 (62.35%), Query Frame = 0
Query:   15 LAQLDEIADYIAGEGQPEAARTLLLRSATLVDSLSRFPLSGHRYETSHPRLQQIRIIAVPGYNVLIYHEVTDDHVFIHAVLSGSR 99
            +  L+++A YI G   P+ AR ++LR  +L++ L   P +G R  T  P ++  R+IA+P Y  L+++EVT+  + IHAV  GSR
Sbjct:    1 MIDLEQVAAYI-GMRSPQGARRVMLRIKSLIEQLPDQPFAGAR--TEDPTIR--RLIALP-YPYLVFYEVTETEIIIHAVRHGSR 79          
BLAST of mRNA_P-canaliculata_contig99188.24035.1 vs. uniprot
Match: UPI000D97539C (type II toxin-antitoxin system RelE/ParE family toxin n=1 Tax=Rhizobium sp. PP-CC-3A-592 TaxID=2135647 RepID=UPI000D97539C)

HSP 1 Score: 51.6 bits (122), Expect = 4.460e-6
Identity = 33/85 (38.82%), Postives = 51/85 (60.00%), Query Frame = 0
Query:   15 LAQLDEIADYIAGEGQPEAARTLLLRSATLVDSLSRFPLSGHRYETSHPRLQQIRIIAVPGYNVLIYHEVTDDHVFIHAVLSGSR 99
            +  L+ +A YI G   P+ AR ++ R  TL++ L   P +G R  T  P ++  R+IA+P Y  LI++E+T+  + IHAV  GSR
Sbjct:    1 MIDLENVAAYI-GARSPQGARRVMQRIKTLIEQLQDQPFAGAR--TQDPTIR--RLIALP-YPYLIFYEITEAEIVIHAVRHGSR 79          
BLAST of mRNA_P-canaliculata_contig99188.24035.1 vs. uniprot
Match: UPI002022F120 (type II toxin-antitoxin system RelE/ParE family toxin n=2 Tax=Ancylobacter sp. VKM B-3255 TaxID=2836179 RepID=UPI002022F120)

HSP 1 Score: 51.2 bits (121), Expect = 4.500e-6
Identity = 37/99 (37.37%), Postives = 54/99 (54.55%), Query Frame = 0
Query:    1 GVSEPKPIRYAEAALAQLDEIADYIAGEGQPEAARTLLLRSATLVDSLSRFPLSGHRYETSHPRLQQIRIIAVPGYNVLIYHEVTDDHVFIHAVLSGSR 99
            G + P  +RY   A+A + E+A YIA    P++AR +  R   L++ L   P  G   +T HP ++  R+ A P Y  +I++EVT D V IHAV    R
Sbjct:    2 GDARPLRLRYTRPAVADIRELAAYIAAHS-PQSARRVSQRLRALIEHLPDQPFLGP--QTEHPAIR--RLTAWP-YPYVIFYEVTPDAVIIHAVRHARR 94          
BLAST of mRNA_P-canaliculata_contig99188.24035.1 vs. uniprot
Match: UPI001C8282FD (type II toxin-antitoxin system RelE/ParE family toxin n=1 Tax=unclassified Rhizobium TaxID=2613769 RepID=UPI001C8282FD)

HSP 1 Score: 50.8 bits (120), Expect = 5.810e-6
Identity = 36/92 (39.13%), Postives = 50/92 (54.35%), Query Frame = 0
Query:    8 IRYAEAALAQLDEIADYIAGEGQPEAARTLLLRSATLVDSLSRFPLSGHRYETSHPRLQQIRIIAVPGYNVLIYHEVTDDHVFIHAVLSGSR 99
            +RY + ALA L +IA Y+     P+ AR +  R   L++ L   P  G R E    R    R+ AVP Y  LI++EVT+  + IHAV  G+R
Sbjct:    3 LRYTKPALADLKDIAGYL-DPRSPQGARRVRQRIKLLIEKLPEQPFVGKRTEDLTIR----RLTAVP-YPYLIFYEVTEAEIIIHAVRHGAR 88          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig99188.24035.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A143ZEA5_9HYPH4.280e-940.22Addiction module toxin, RelE/StbE family n=6 Tax=A... [more]
A0A537S1H4_9PROT2.410e-840.22Type II toxin-antitoxin system RelE/ParE family to... [more]
A0A4R1X507_9HYPH6.160e-738.82Plasmid stabilization system protein ParE n=1 Tax=... [more]
UPI000D97539C4.460e-638.82type II toxin-antitoxin system RelE/ParE family to... [more]
UPI002022F1204.500e-637.37type II toxin-antitoxin system RelE/ParE family to... [more]
UPI001C8282FD5.810e-639.13type II toxin-antitoxin system RelE/ParE family to... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007712Toxin-antitoxin system, RelE/ParE toxin familyPFAMPF05016ParE_toxincoord: 8..99
e-value: 9.6E-11
score: 42.2
IPR035093Toxin-antitoxin system, RelE/ParE toxin domain superfamilyGENE3D3.30.2310.20coord: 2..102
e-value: 3.2E-14
score: 55.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig99188contigP-canaliculata_contig99188:26..358 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig99188.24035.1mRNA_P-canaliculata_contig99188.24035.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig99188 26..358 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig99188.24035.1 ID=prot_P-canaliculata_contig99188.24035.1|Name=mRNA_P-canaliculata_contig99188.24035.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=111bp
GVSEPKPIRYAEAALAQLDEIADYIAGEGQPEAARTLLLRSATLVDSLSR
FPLSGHRYETSHPRLQQIRIIAVPGYNVLIYHEVTDDHVFIHAVLSGSRG
TKFVERSLRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007712RelE/ParE_toxin
IPR035093RelE/ParE_toxin_dom_sf