Homology
BLAST of mRNA_P-canaliculata_contig99183.24034.1 vs. uniprot
Match:
A0A5C6B0A3_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Poly21 TaxID=2528014 RepID=A0A5C6B0A3_9BACT)
HSP 1 Score: 90.9 bits (224), Expect = 1.900e-19
Identity = 56/173 (32.37%), Postives = 93/173 (53.76%), Query Frame = 0
Query: 24 SGIDYTEDSPTSGRVTAGMFVLGMPILLGFGFLVSTCIAYIARRMGAWVAWPLTAMVFAMLIYLSAVSSSPWNRLADVLNVDLQ-NVRICRLKQMDSFGDGITTLALIDGDDELFDRICLANGLRKTSDLTPSFFNWLYEDKTPFLEPVTVFENDRLTCYNDAANNRLFIYHR 195
S +D++ GR TAG FVLG+P+L+ L + + +ARR +AW ++F L++ + S+P RL L+V++ +V+I RL++ DSF DGITT+ D E + + + L + D+T + + D ++ V + NDRLTCY+D+ L+ R
Sbjct: 2 SSMDFSTALAGDGRKTAGWFVLGLPMLVPIAMLSTMPFSMVARRGRRAIAWLAMCVLFGALMWFAYSQSTPLARLEWALDVEIPTDVKIIRLRETDSFNDGITTVGACIADREFINDLVAHHSL--SEDITGGYISPYLPDANISVDGVG-YRNDRLTCYHDSKTKTLYFVRR 171
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig99183.24034.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
L L R P F S L F A T S M I C F L V W A W F S T S G I D Y T E D S P T S G R V T A G M F V L G M P I L L G F G F L V S T C I A Y I A R R M G A W V A W P L T A M V F A M L I Y L S A V S S S P W N R L A D V L N V D L Q N V R I C R L K Q M D S F G D G I T T L A L I D G D D E L F D R I C L A N G L R K T S D L T P S F F N W L Y E D K T P F L E P V T V F E N D R L T C Y N D A A N N R L F I Y H R S R S Y P G E D * 20 40 60 80 100 120 140 160 180 200 Expect = 1.90e-19 / Id = 32.37 Sequence A0A5C6B0A3_9BACT
Match Name E-value Identity Description
A0A5C6B0A3_9BACT 1.900e-19 32.37 Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
L L R P F S L F A T S M I C F L V W A W F S T S G I D Y T E D S P T S G R V T A G M F V L G M P I L L G F G F L V S T C I A Y I A R R M G A W V A W P L T A M V F A M L I Y L S A V S S S P W N R L A D V L N V D L Q N V R I C R L K Q M D S F G D G I T T L A L I D G D D E L F D R I C L A N G L R K T S D L T P S F F N W L Y E D K T P F L E P V T V F E N D R L T C Y N D A A N N R L F I Y H R S R S Y P G E D * 20 40 60 80 100 120 140 160 180 200 Score = Score = Score = Score = Score = Score = Score = Score = 0.55 Score = Score = Score = Sequence CYTOPLASMIC_DOMAIN TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN TRANSMEMBRANE TRANSMEMBRANE SignalP-TM TMhelix TMhelix TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 27..37 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 38..65 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 66..70 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 90..203 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 1..5 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 71..89 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 6..26 None No IPR available SIGNALP_EUK SignalP-TM SignalP-TM coord: 1..19 None No IPR available TMHMM TMhelix coord: 71..90 None No IPR available TMHMM TMhelix coord: 42..64 None No IPR available TMHMM TMhelix coord: 5..22
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_P-canaliculata_contig99183.24034.1 ID=prot_P-canaliculata_contig99183.24034.1|Name=mRNA_P-canaliculata_contig99183.24034.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=204bp back to top