Homology
BLAST of mRNA_P-canaliculata_contig98864.24002.1 vs. uniprot
Match:
A0A848UBG7_9GAMM (Uncharacterized protein n=1 Tax=Granulosicoccus sp. TaxID=1943584 RepID=A0A848UBG7_9GAMM)
HSP 1 Score: 186 bits (473), Expect = 1.900e-55
Identity = 103/231 (44.59%), Postives = 158/231 (68.40%), Query Frame = 0
Query: 1 MSFTLPATHLLRQYLRFAAVVVFLLLMIRAGYALWRLPAIEAGGDPLELFLTGLRFDLSLVGALCLVPVSVGPVLAMFDATRVVAKWFVLLWLFAALVLVLVTELLTPQLLAGEGVRPDASTFAELPALTASVGGLVADHPVPVTIGVLLAILILAAYVTRVESARFLRYPVSRGPAIALALVGGLVCLIAARSAIDPTAPALSVADARLGGEPIVDQIAMNSAWTTLRSL 231
M TLPATHLLRQ+L F VVFLL +IRA Y LW+ P + + LFL GLR+D++LVG +C+VPV +G +L+M D TR+ A++ + L+L L+LVL+ EL+TP L +G+RPD + + + +V++H +P+ +G LL +LIL A+ +R+E RFL+Y +S A+ LA++GGL C++A RS +D +PALS+AD+++ + V+ +A+N+A+ TL SL
Sbjct: 1 MKSTLPATHLLRQFLLFVLTVVFLLTLIRAAYGLWQYPKLADSDALVPLFLQGLRYDIALVGLVCIVPVILGTLLSMLDTTRLFARFLITLFLTGGLLLVLLLELITPWFLQTQGLRPDLQLLNGVENPGSVLSTIVSEHAIPLAVGALLCVLILIAFWSRMELQRFLKYRLSVPAALLLAILGGLACVVAIRSNVDLRSPALSLADSQISTDETVNDLALNTAYKTLYSL 231
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig98864.24002.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M S F T L P A T H L L R Q Y L R F A A V V V F L L L M I R A G Y A L W R L P A I E A G G D P L E L F L T G L R F D L S L V G A L C L V P V S V G P V L A M F D A T R V V A K W F V L L W L F A A L V L V L V T E L L T P Q L L A G E G V R P D A S T F A E L P A L T A S V G G L V A D H P V P V T I G V L L A I L I L A A Y V T R V E S A R F L R Y P V S R G P A I A L A L V G G L V C L I A A R S A I D P T A P A L S V A D A R L G G E P I V D Q I A M N S A W T T L R S L G A S V L P G S * 20 40 60 80 100 120 140 160 180 200 220 240 Expect = 1.90e-55 / Id = 44.59 Sequence A0A848UBG7_9GAMM
Match Name E-value Identity Description
A0A848UBG7_9GAMM 1.900e-55 44.59 Uncharacterized protein n=1 Tax=Granulosicoccus sp... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M S F T L P A T H L L R Q Y L R F A A V V V F L L L M I R A G Y A L W R L P A I E A G G D P L E L F L T G L R F D L S L V G A L C L V P V S V G P V L A M F D A T R V V A K W F V L L W L F A A L V L V L V T E L L T P Q L L A G E G V R P D A S T F A E L P A L T A S V G G L V A D H P V P V T I G V L L A I L I L A A Y V T R V E S A R F L R Y P V S R G P A I A L A L V G G L V C L I A A R S A I D P T A P A L S V A D A R L G G E P I V D Q I A M N S A W T T L R S L G A S V L P G S * 20 40 60 80 100 120 140 160 180 200 220 240 Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Sequence TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN TRANSMEMBRANE TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN TRANSMEMBRANE CYTOPLASMIC_DOMAIN TMhelix TMhelix TMhelix TMhelix TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 172..192 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 107..141 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 55..75 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 142..160 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 193..239 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 1..13 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 161..171 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 87..106 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 36..54 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 14..35 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 76..86 None No IPR available TMHMM TMhelix coord: 17..39 None No IPR available TMHMM TMhelix coord: 137..159 None No IPR available TMHMM TMhelix coord: 54..76 None No IPR available TMHMM TMhelix coord: 83..105 None No IPR available TMHMM TMhelix coord: 172..194
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_P-canaliculata_contig98864.24002.1 ID=prot_P-canaliculata_contig98864.24002.1|Name=mRNA_P-canaliculata_contig98864.24002.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=240bp back to top