prot_P-canaliculata_contig987.23979.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig987.23979.1
Unique Nameprot_P-canaliculata_contig987.23979.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length551
Homology
BLAST of mRNA_P-canaliculata_contig987.23979.1 vs. uniprot
Match: D8LC52_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC52_ECTSI)

HSP 1 Score: 323 bits (828), Expect = 3.300e-99
Identity = 247/559 (44.19%), Postives = 309/559 (55.28%), Query Frame = 0
Query:    5 TGSICVVLAFFSGPVLVFLAVLMLGICGMCYSIRQRGALEYLPIGIVDILTRTTLLEFLTDTTVFDAIKTYLVFMLGLSAEETERVLHSLPEDMRDTLTRPGLMHTLPRPLQGILHPIDQSASSCRRLMASET--SPAGEARDTEVRGRRGLQRAEGAENMRNGANREALRAAIP-ERDDETRTSP-LGQLVWNPFPLPNAPGMPLLLESDKTRDAQQTPLIQPAEVDGTGREGRVGEPEEKSDGDDVEEQEGVSSDIHDRDDVHEAVGPNRGAGGSD----RRRPWVRS--PPQSSRSQSPANARR--GTSPSDDNWAPTRAEVPRGPTSTSRELRVGGWNIGNPGRIFGGSSAGPSSSTSG-LVPSAERIVSSILQHRVNKALTSAWNLVDERSVRRAAFGSGVAFAAHVALSERARRQATMMLRGGLLAGLAGTATVCAFLSYLKRGEVSSAPTDEIARGTVGTVGEAVAATTAAVTSDREERAEGSATRCNEGGGTTKPLRL----LFQPFVSKAPSTRNLVRLLGMICILLAIRKWQSVRRLVSRASRPSIMYG 546
            +G +C+V++ FSG  LVFLAV+ +G+CGMCYS+RQRGALEYLP G+ ++LTRTTLLEFLTDT+VFDAIKTYLVFM+GLS +ET+ VL SLPEDM+ TLTRPG+MHTLPRP Q +L P +  A              P    R  E +G   L  A GA                   RD E   +P LGQLVWNP  LP + G       ++  + ++    Q  E+D  G +         S   D EE+ G S+  H  DD   A        G D    RRRPW     PP +SRS SPA  R    T  ++ + A +   V       +R L   GW  G       G+  GP+++T+G +VPSAER+V+SILQ RV+ A+ +AWN VDE+ VRRAA GSG+A AAHVA SERARRQA  MLRG LLA LAGTATVCA L+YLK GE     T                        D  + +     R   G  T   +R     L +     +P+TRN+V LL MIC+LLA+RKWQ +RR   RA  P  MYG
Sbjct:  108 SGGMCLVVSVFSGSALVFLAVIAIGVCGMCYSVRQRGALEYLPSGVTELLTRTTLLEFLTDTSVFDAIKTYLVFMMGLSEDETQGVLASLPEDMQYTLTRPGIMHTLPRPFQDLLLPPNARAGVLIGAPDGREVIGPRRRHRGVETQG---LAEAGGAXXXXXXXXXXXXXXXXXXHRDGEEGGAPVLGQLVWNP--LPASLGQETTNGEEQEGEGEEHVFPQEEELDRAGGDA--------SSSVDSEEERGRSASRH-ADDGGRARRNGVDDDGRDDNATRRRPWEAEAYPPHASRSLSPAAVRNRAATDVAEADGARSSRRVSSALPIPARRLGTAGW-FGRTHANGSGNPPGPAATTAGGMVPSAERLVASILQRRVDGAVRTAWNAVDEQGVRRAALGSGIALAAHVAFSERARRQAGSMLRGSLLAALAGTATVCASLAYLKPGEGGRERTASXXXXXXXXXXXXXXXXEPGA--DVVDPSPTQGPRRERGQDTLSRIRGFRDGLQRWMTGVSPTTRNMVHLLSMICLLLAVRKWQLLRRAARRAMMPRTMYG 649          
BLAST of mRNA_P-canaliculata_contig987.23979.1 vs. uniprot
Match: A0A1V9YKG7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKG7_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 2.500e-13
Identity = 49/138 (35.51%), Postives = 81/138 (58.70%), Query Frame = 0
Query:   14 FFSGPVLVFLAVLMLGICGMCYS------------IRQRGALEYLPIGIVDILTRTTLLEFLTDTTVFDAIKTYLVFMLGLSAEETERVLHSLPEDMRDTLTRPGLMHTLPRPLQGILHPIDQSASSCRRLMASETSP 139
            +F+  +L+ L +   G  G+CY+            + +RG + +LP G+  +L RTTLLE+LTDT+ F++++ YL F++ LSA E +RV+ SLP + +  L +PGL++ LP  +Q  L P D+ A S      +  +P
Sbjct:  132 YFTRRILIALVLFGYGAWGLCYAWTVPLWRWYMYDMCERGLIAHLPEGLQTLLLRTTLLEWLTDTSFFESMQKYLPFLMPLSAPEQQRVVRSLPSESQAMLVKPGLINLLPDVVQDALLPSDKQAVSTEPATRALAAP 269          
BLAST of mRNA_P-canaliculata_contig987.23979.1 vs. uniprot
Match: A0A7S1XZ18_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZ18_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 2.530e-13
Identity = 41/93 (44.09%), Postives = 64/93 (68.82%), Query Frame = 0
Query:   29 GICGMCYSIRQRGALEYLPIGIVDILTRTTLLEFLTDTTVFDAIKTYLVFMLGLSAEETERVLHSLPEDMRDTLTRPGLMHTLPRPLQGILHP 121
            G  GM   +RQRG LE +P  +  ++  ++LLE+LTD + F+A++ Y +F+LGL+ EETE  L++LP +++ TL RPG++H LP  +Q  L P
Sbjct:   88 GAAGMVLHVRQRGLLELIPERVRTVMLTSSLLEWLTDFSFFNALRPYAIFLLGLNEEETEYALNALPVEVQTTLMRPGVVHLLPDSMQRALLP 180          
BLAST of mRNA_P-canaliculata_contig987.23979.1 vs. uniprot
Match: A0A5D6XP04_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XP04_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.920e-9
Identity = 47/132 (35.61%), Postives = 75/132 (56.82%), Query Frame = 0
Query:    3 TTTGSICVVLA-FFSGPVLVFLAVLMLGICGMCYS------------IRQRGALEYLPIGIVDILTRTTLLEFLTDTTVFDAIKTYLVFMLGLSAEETERVLHSLPEDMRDTLTRPGLMHTLPRPLQGILHP 121
            T   S+ V+LA F S  V++ L  L  G  G+ YS              ++G + +LP  +  +L RT+LLE+LTD+++ + ++ +L F+L LS  E  R+L  +P + + TLTRPGL+  LP  +Q +L P
Sbjct:  130 TVCASLTVILAEFLSRRVMIALLALAYGALGLAYSWSVPLWRWYLDEASRKGLVAFLPAPLQQLLLRTSLLEWLTDSSMSERVQPFLPFLLPLSRAEQTRLLERMPVESQLTLTRPGLLPLLPESVQRVLLP 261          
BLAST of mRNA_P-canaliculata_contig987.23979.1 vs. uniprot
Match: A0A2D4BM40_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BM40_PYTIN)

HSP 1 Score: 71.2 bits (173), Expect = 2.780e-9
Identity = 54/151 (35.76%), Postives = 78/151 (51.66%), Query Frame = 0
Query:    3 TTTGSICVVLA-FFSGPVLVFLAVLMLGICGMCYS------------IRQRGALEYLPIGIVDILTRTTLLEFLTDTTVFDAIKTYLVFMLGLSAEETERVLHSLPEDMRDTLTRPGLMHTLPRPLQGILHPI----DQSASSCRRLMASE 136
            T   S+ V+L  F S  V++ +  L  G  G+ YS               +G +  LP  +  +L RTTLLE+LTDTT  D ++ +L F+L LS  E  RVL  LP + +  LTRPG++  LP  +Q +L P     D   S+ + L+A E
Sbjct:  355 TVCFSLTVILTEFLSRRVMIAIISLAYGTLGLLYSWSVPAWXWYMEEASAKGLVTLLPESVQHLLLRTTLLEWLTDTTFMDKLRPFLPFLLPLSKAEQNRVLEQLPVETQLMLTRPGMVTLLPDGVQRVLLPASTTGDDDGSAVQDLVARE 505          
BLAST of mRNA_P-canaliculata_contig987.23979.1 vs. uniprot
Match: A0A2D4CHS9_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CHS9_PYTIN)

HSP 1 Score: 70.1 bits (170), Expect = 6.310e-9
Identity = 51/146 (34.93%), Postives = 74/146 (50.68%), Query Frame = 0
Query:    3 TTTGSICVVLA-FFSGPVLVFLAVLMLGICGMCYS------------IRQRGALEYLPIGIVDILTRTTLLEFLTDTTVFDAIKTYLVFMLGLSAEETERVLHSLPEDMRDTLTRPGLMHTLPRPLQGILHPIDQSASSCRRLMAS 135
            T   S+ V+L  F S  V++ +  L  G  G+ YS               +G +  LP  +  +L RTTLLE+LTDTT  D ++ +L F+L LS  E  RVL  LP + +  LTRPG++  LP  +Q +L P   + +    L  S
Sbjct:  366 TVCFSLTVILTEFLSRRVMIAIISLAYGTLGLLYSWSVPAWSWYMEEASAKGLVTLLPESVQHLLLRTTLLEWLTDTTFMDKLRPFLPFLLPLSKAEQNRVLEQLPVETQLMLTRPGMVTLLPDGVQRVLLPASTTEAKVSELTMS 511          
BLAST of mRNA_P-canaliculata_contig987.23979.1 vs. uniprot
Match: K3WUF6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUF6_GLOUD)

HSP 1 Score: 69.3 bits (168), Expect = 8.150e-9
Identity = 48/137 (35.04%), Postives = 74/137 (54.01%), Query Frame = 0
Query:    3 TTTGSICVVLA-FFSGPVLVFLAVLMLGICGMCYS------------IRQRGALEYLPIGIVDILTRTTLLEFLTDTTVFDAIKTYLVFMLGLSAEETERVLHSLPEDMRDTLTRPGLMHTLPRPLQGILHPIDQSA 126
            T   S+ V+L  F S  V++ L     G  G+ YS               +G + +LP  + ++L RT+LLE++TDTT+ D I+ +L F+L LS  E  R+L  +P + +  LTRPGL+  LP  +Q  L P + S+
Sbjct:  154 TVCFSLTVILTEFLSRRVMIALLAFSYGALGLVYSWSVPVWRWYLDEATTKGLIAFLPESVQELLLRTSLLEWMTDTTMSDKIQPFLPFLLPLSRAEQTRLLERMPVENQLVLTRPGLLPLLPESVQKALLPSEPSS 290          
BLAST of mRNA_P-canaliculata_contig987.23979.1 vs. uniprot
Match: D0MXH0_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MXH0_PHYIT)

HSP 1 Score: 62.4 bits (150), Expect = 1.200e-6
Identity = 46/154 (29.87%), Postives = 79/154 (51.30%), Query Frame = 0
Query:    3 TTTGSICVVLA-FFSGPVLVFLAVLMLGICGMCYS------------IRQRGALEYLPIGIVDILTRTTLLEFLTDTTVFDAIKTYLVFMLGLSAEETERVLHSLPEDMRDTLTRPGLMHTLPRPLQGILHPIDQSASSCRRLMASETSPAGEA 143
            T T ++ V+L  F S   ++ L  L+    G+ YS            +  RG + +LP  + ++L RT+LLE+LTDT+  D +  +L F+L L+  E  +++  +P + +  +T+PGL+  LP  +Q +L P   S S        E+  + EA
Sbjct:  114 TVTFALTVLLTEFLSRRAMLALVALVYASLGLLYSWSVPIWKWYQEEMHTRGLVGFLPDSMQELLLRTSLLEWLTDTSFSDKVAPFLPFLLPLTRAEQMKLMEQMPPESQVMMTKPGLLPLLPDSVQNVLLPAAGSDSDQDEAKQEESQTSEEA 267          
BLAST of mRNA_P-canaliculata_contig987.23979.1 vs. uniprot
Match: F0WGE4_9STRA (Uncharacterized protein AlNc14C91G5676 n=2 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WGE4_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.130e-5
Identity = 36/109 (33.03%), Postives = 59/109 (54.13%), Query Frame = 0
Query:   25 VLMLGICGMCYS------------IRQRGALEYLPIGIVDILTRTTLLEFLTDTTVFDAIKTYLVFMLGLSAEETERVLHSLPEDMRDTLTRPGLMHTLPRPLQGILHP 121
            V M G  GM YS              ++G + YLP  +  +L R +L+E+L+D T+F+++K  + F+L L+  E + VL  LP+  +  + RPG+++  P  LQ  L P
Sbjct:    3 VFMYGTTGMLYSWSFLHWKWYIQTFSKKGLIGYLPDSLQHLLLRCSLIEWLSDRTLFESMKALVPFVLPLTESEQKIVLRQLPKSTQRIMCRPGMINFFPTQLQKALLP 111          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig987.23979.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LC52_ECTSI3.300e-9944.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1V9YKG7_9STRA2.500e-1335.51Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A7S1XZ18_9STRA2.530e-1344.09Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A5D6XP04_9STRA1.920e-935.61Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A2D4BM40_PYTIN2.780e-935.76Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A2D4CHS9_PYTIN6.310e-934.93Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
K3WUF6_GLOUD8.150e-935.04Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
D0MXH0_PHYIT1.200e-629.87Uncharacterized protein n=1 Tax=Phytophthora infes... [more]
F0WGE4_9STRA1.130e-533.03Uncharacterized protein AlNc14C91G5676 n=2 Tax=Alb... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..35
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 511..528
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 439..510
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 529..550
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 36..414
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 415..438
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 416..438

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig987contigP-canaliculata_contig987:1042..15626 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig987.23979.1mRNA_P-canaliculata_contig987.23979.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig987 1027..16224 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig987.23979.1 ID=prot_P-canaliculata_contig987.23979.1|Name=mRNA_P-canaliculata_contig987.23979.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=551bp
MFTTTGSICVVLAFFSGPVLVFLAVLMLGICGMCYSIRQRGALEYLPIGI
VDILTRTTLLEFLTDTTVFDAIKTYLVFMLGLSAEETERVLHSLPEDMRD
TLTRPGLMHTLPRPLQGILHPIDQSASSCRRLMASETSPAGEARDTEVRG
RRGLQRAEGAENMRNGANREALRAAIPERDDETRTSPLGQLVWNPFPLPN
APGMPLLLESDKTRDAQQTPLIQPAEVDGTGREGRVGEPEEKSDGDDVEE
QEGVSSDIHDRDDVHEAVGPNRGAGGSDRRRPWVRSPPQSSRSQSPANAR
RGTSPSDDNWAPTRAEVPRGPTSTSRELRVGGWNIGNPGRIFGGSSAGPS
SSTSGLVPSAERIVSSILQHRVNKALTSAWNLVDERSVRRAAFGSGVAFA
AHVALSERARRQATMMLRGGLLAGLAGTATVCAFLSYLKRGEVSSAPTDE
IARGTVGTVGEAVAATTAAVTSDREERAEGSATRCNEGGGTTKPLRLLFQ
PFVSKAPSTRNLVRLLGMICILLAIRKWQSVRRLVSRASRPSIMYGMPPP
*
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