prot_P-canaliculata_contig985.23958.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig985.23958.1
Unique Nameprot_P-canaliculata_contig985.23958.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length148
Homology
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BLAST of mRNA_P-canaliculata_contig985.23958.1 vs. uniprot
Match: D8LNE8_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNE8_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 1.720e-43
Identity = 85/147 (57.82%), Postives = 102/147 (69.39%), Query Frame = 0 
Query:    1 MHIEYLPRRPRVVTFDNVVPTLKLVPAADGRGAVLDAWTDPIRIHDEKVLELEQAMFKEKHLVIDNNTLMLLTHVWISPMMILCGGHWFIAMGKLDVLPHKLEEYAVLEFEMREFENKFARAKALTERLELQAKWETYCAMEPAYEK 147
            M IE LPRRP VVTFDN +  LKL P A G+GAVLD WTDPI  HD+KV+E+EQAM +EK LV   + +   T V           +W +AMG L+  PHKLEEY  L+FEM+ FE +FARA  LTE+LELQ++WE YCAMEP YEK
Sbjct:    1 MCIESLPRRPHVVTFDNALLALKLAPGARGKGAVLDGWTDPIGAHDQKVIEVEQAMLQEKELV---SAIKYCTRV---------EKNWMVAMGLLNEQPHKLEEYVALKFEMKTFEKRFARASVLTEKLELQSQWEKYCAMEPMYEK 135
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig985.23958.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNE8_ECTSI1.720e-4357.82Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 112..132
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..90
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..67
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 91..148
NoneNo IPR availableTMHMMTMhelixcoord: 69..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig985contigP-canaliculata_contig985:6860..7704 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig985.23958.1mRNA_P-canaliculata_contig985.23958.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig985 6860..7704 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig985.23958.1 ID=prot_P-canaliculata_contig985.23958.1|Name=mRNA_P-canaliculata_contig985.23958.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=148bp
MHIEYLPRRPRVVTFDNVVPTLKLVPAADGRGAVLDAWTDPIRIHDEKVL
ELEQAMFKEKHLVIDNNTLMLLTHVWISPMMILCGGHWFIAMGKLDVLPH
KLEEYAVLEFEMREFENKFARAKALTERLELQAKWETYCAMEPAYEKA
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