Homology
BLAST of mRNA_P-canaliculata_contig985.23958.1 vs. uniprot
Match:
D8LNE8_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNE8_ECTSI)
HSP 1 Score: 160 bits (406), Expect = 1.720e-43
Identity = 85/147 (57.82%), Postives = 102/147 (69.39%), Query Frame = 0
Query: 1 MHIEYLPRRPRVVTFDNVVPTLKLVPAADGRGAVLDAWTDPIRIHDEKVLELEQAMFKEKHLVIDNNTLMLLTHVWISPMMILCGGHWFIAMGKLDVLPHKLEEYAVLEFEMREFENKFARAKALTERLELQAKWETYCAMEPAYEK 147
M IE LPRRP VVTFDN + LKL P A G+GAVLD WTDPI HD+KV+E+EQAM +EK LV + + T V +W +AMG L+ PHKLEEY L+FEM+ FE +FARA LTE+LELQ++WE YCAMEP YEK
Sbjct: 1 MCIESLPRRPHVVTFDNALLALKLAPGARGKGAVLDGWTDPIGAHDQKVIEVEQAMLQEKELV---SAIKYCTRV---------EKNWMVAMGLLNEQPHKLEEYVALKFEMKTFEKRFARASVLTEKLELQSQWEKYCAMEPMYEK 135
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig985.23958.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M H I E Y L P R R P R V V T F D N V V P T L K L V P A A D G R G A V L D A W T D P I R I H D E K V L E L E Q A M F K E K H L V I D N N T L M L L T H V W I S P M M I L C G G H W F I A M G K L D V L P H K L E E Y A V L E F E M R E F E N K F A R A K A L T E R L E L Q A K W E T Y C A M E P A Y E K A 20 40 60 80 100 120 140 Expect = 1.72e-43 / Id = 57.82 Sequence D8LNE8_ECTSI
Match Name E-value Identity Description
D8LNE8_ECTSI 1.720e-43 57.82 Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
back to top
InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M H I E Y L P R R P R V V T F D N V V P T L K L V P A A D G R G A V L D A W T D P I R I H D E K V L E L E Q A M F K E K H L V I D N N T L M L L T H V W I S P M M I L C G G H W F I A M G K L D V L P H K L E E Y A V L E F E M R E F E N K F A R A K A L T E R L E L Q A K W E T Y C A M E P A Y E K A 20 40 60 80 100 120 140 Score = Score = Score = Score = Score = Sequence Coil TRANSMEMBRANE CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 112..132 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 68..90 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 1..67 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 91..148 None No IPR available TMHMM TMhelix coord: 69..91
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_P-canaliculata_contig985.23958.1 ID=prot_P-canaliculata_contig985.23958.1|Name=mRNA_P-canaliculata_contig985.23958.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=148bp back to top