prot_P-canaliculata_contig98444.23948.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig98444.23948.1
Unique Nameprot_P-canaliculata_contig98444.23948.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length125
Homology
[Close]
BLAST of mRNA_P-canaliculata_contig98444.23948.1 vs. uniprot
Match: A0A2D5YPT7_9PROT (Cytochrome c domain-containing protein n=1 Tax=Halobacteriovorax sp. TaxID=2020862 RepID=A0A2D5YPT7_9PROT)

HSP 1 Score: 58.9 bits (141), Expect = 1.300e-7
Identity = 35/85 (41.18%), Postives = 47/85 (55.29%), Query Frame = 0 
Query:   40 MSDLKSKLHPDDIKKIALALSKEIGNLTGVLLYNNNCASCHGSIETSDKLYATSQAIVASISSQSAMKHLSFLDEKSIQLIADAL 124
            MS+ KS+L  +D     +A +       G  LY NNC SCHGS+E SDKL     A+ ++I   S+M HLSFL +  I  + D L
Sbjct:    1 MSEKKSELVFNDSSNDGVADNSIDTIALGKRLYKNNCMSCHGSLENSDKLGTNYSAVKSAIQDVSSMSHLSFLTDNEISEVVDVL 85
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig98444.23948.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2D5YPT7_9PROT1.300e-741.18Cytochrome c domain-containing protein n=1 Tax=Hal... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036280Multiheme cytochrome superfamilySUPERFAMILY48695Multiheme cytochromescoord: 10..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig98444contigP-canaliculata_contig98444:299..673 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig98444.23948.1mRNA_P-canaliculata_contig98444.23948.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig98444 299..673 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig98444.23948.1 ID=prot_P-canaliculata_contig98444.23948.1|Name=mRNA_P-canaliculata_contig98444.23948.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=125bp
NGETLYSLHCASCHLGLPESTIHSKTTSEIEFALSNVKEMSDLKSKLHPD
DIKKIALALSKEIGNLTGVLLYNNNCASCHGSIETSDKLYATSQAIVASI
SSQSAMKHLSFLDEKSIQLIADALS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036280Multihaem_cyt_sf