prot_P-canaliculata_contig9844.23947.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9844.23947.1
Unique Nameprot_P-canaliculata_contig9844.23947.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length224
Homology
BLAST of mRNA_P-canaliculata_contig9844.23947.1 vs. uniprot
Match: D8LFY4_ECTSI (Elongation factor G, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFY4_ECTSI)

HSP 1 Score: 385 bits (990), Expect = 5.510e-127
Identity = 196/226 (86.73%), Postives = 211/226 (93.36%), Query Frame = 0
Query:    1 VAYREAITKPAEVDYTHKKQSGGSGQFARVKIKFEPSDMDEEGATADFTFESEIKGGTVPKEYIPG---GVESVLSNGVLAGFPVLGMKAILVDGAYHDVDSSVMAFEIAGRAAAREGLRKAGARLMEPVMQVDVITPEEYMGDVIGDINARRGQVVELTDRNGLKQVESTVPLANMFQYVSTLRSATKGRANYSMQLLKYDYVPQNVEKEVVAKYGSGKKPVEDD 223
            VAYREAIT+PAEVDYTHKKQSGGSGQFARVK+KF P+DMDE+GAT+DF F SEIKGG VPKEYIPG   GVESVLSNGVLAGFPVLGMKA+LVDGA+HDVDSSVMAFEIAGRAA REGLRKAGARLMEP+MQVD+ITPEEYMGDVIGDIN+RRG +VEL+DRNGLKQVESTVPLANMFQYVSTLRSATKGRANYSMQLLKYD+VP NVEKEVVAKYG  +   E+D
Sbjct:  553 VAYREAITRPAEVDYTHKKQSGGSGQFARVKVKFVPADMDEDGATSDFEFVSEIKGGAVPKEYIPGVQKGVESVLSNGVLAGFPVLGMKAVLVDGAFHDVDSSVMAFEIAGRAACREGLRKAGARLMEPIMQVDIITPEEYMGDVIGDINSRRGSIVELSDRNGLKQVESTVPLANMFQYVSTLRSATKGRANYSMQLLKYDFVPPNVEKEVVAKYGMNRADDEED 778          
BLAST of mRNA_P-canaliculata_contig9844.23947.1 vs. uniprot
Match: A0A836CHR4_9STRA (Elongation factor G, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHR4_9STRA)

HSP 1 Score: 341 bits (874), Expect = 1.090e-109
Identity = 173/226 (76.55%), Postives = 199/226 (88.05%), Query Frame = 0
Query:    1 VAYREAITKPAEVDYTHKKQSGGSGQFARVKIKFEPSDMDEEGATADFTFESEIKGGTVPKEYIPG---GVESVLSNGVLAGFPVLGMKAILVDGAYHDVDSSVMAFEIAGRAAAREGLRKAGARLMEPVMQVDVITPEEYMGDVIGDINARRGQVVELTDRNGLKQVESTVPLANMFQYVSTLRSATKGRANYSMQLLKYDYVPQNVEKEVVAKYGSGKKPVEDD 223
            VAYREAITK AE+DYTHKKQSGGSGQFARVKI+F P +  +E +  DFTF S+IKGG+VPKEYIPG   G+ESVL+NGVLAGFPVLG+KA LVDGAYHDVDSSVMAFEIAGRAA REGLRKAGARLMEP+M+VDV+TPEEYMGD+IGDIN+RRGQVVE+ DRNGLKQVE+ VPLANMFQYVS LRS +KGRA Y+M L KYD++P NVEKE+ +KY +GK   +D+
Sbjct:  552 VAYREAITKTAEIDYTHKKQSGGSGQFARVKIQFAPVEEGDEASATDFTFVSDIKGGSVPKEYIPGVQKGIESVLANGVLAGFPVLGLKATLVDGAYHDVDSSVMAFEIAGRAATREGLRKAGARLMEPIMKVDVVTPEEYMGDIIGDINSRRGQVVEMIDRNGLKQVEAAVPLANMFQYVSHLRSVSKGRAQYTMVLKKYDFLPANVEKEITSKY-AGKVASDDE 776          
BLAST of mRNA_P-canaliculata_contig9844.23947.1 vs. uniprot
Match: A0A7S1GRX9_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GRX9_CYCTE)

HSP 1 Score: 311 bits (798), Expect = 2.050e-102
Identity = 154/212 (72.64%), Postives = 182/212 (85.85%), Query Frame = 0
Query:    1 VAYREAITKPAEVDYTHKKQSGGSGQFARVKIKFEPSDMDEEGATADFTFESEIKGGTVPKEYIPG---GVESVLSNGVLAGFPVLGMKAILVDGAYHDVDSSVMAFEIAGRAAAREGLRKAGARLMEPVMQVDVITPEEYMGDVIGDINARRGQVVELTDRNGLKQVESTVPLANMFQYVSTLRSATKGRANYSMQLLKYDYVPQNVEKEV 209
            V+YREAIT PAE+DYTHKKQSGGSGQ+ARVKIKFEP +  +E    DF F+S+IKGG VP+EYIPG   G+ESVL +GV+AG+PVLGMKA LVDGAYHDVDSSVMAFEIAGRAA REGLRKA ARLMEP+MQVDV TPEEYMGD++GDIN+RRG V +L +R  +K + + VPLANMFQYVSTLRS +KGRA+YSM+L  YD+VP N+E+E+
Sbjct:  203 VSYREAITAPAEIDYTHKKQSGGSGQYARVKIKFEPKEFSDEEGAMDFEFQSDIKGGNVPREYIPGVQKGIESVLGSGVIAGYPVLGMKATLVDGAYHDVDSSVMAFEIAGRAATREGLRKAKARLMEPLMQVDVTTPEEYMGDILGDINSRRGLVGDLGERGNVKTISAQVPLANMFQYVSTLRSMSKGRADYSMKLANYDFVPPNIEEEL 414          
BLAST of mRNA_P-canaliculata_contig9844.23947.1 vs. uniprot
Match: A0A7S3LBD3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LBD3_9STRA)

HSP 1 Score: 306 bits (785), Expect = 5.840e-101
Identity = 154/212 (72.64%), Postives = 181/212 (85.38%), Query Frame = 0
Query:    1 VAYREAITKPAEVDYTHKKQSGGSGQFARVKIKFEPSDMDEEGATADFTFESEIKGGTVPKEYIPG---GVESVLSNGVLAGFPVLGMKAILVDGAYHDVDSSVMAFEIAGRAAAREGLRKAGARLMEPVMQVDVITPEEYMGDVIGDINARRGQVVELTDRNGLKQVESTVPLANMFQYVSTLRSATKGRANYSMQLLKYDYVPQNVEKEV 209
            V+YREAIT  AE++YTHKKQSGGSGQFA++K++F+P DM +E    DF F +EIKGG VPKEYIPG   G+ESVL  GV+AGFPVLG+KA L+DGAYHDVDSSVMAFEIAGRAAAREGLRKA ARLMEP+MQVD+ TPEEYMGD++GDIN+RRG V EL +R  +K + + VPLANMFQYVSTLRS +KGRANYSM+L  YD+VPQNVE E+
Sbjct:  174 VSYREAITASAEIEYTHKKQSGGSGQFAKIKVRFDPKDMADED-NMDFEFVTEIKGGNVPKEYIPGVQKGIESVLGTGVIAGFPVLGLKATLLDGAYHDVDSSVMAFEIAGRAAAREGLRKAKARLMEPLMQVDITTPEEYMGDILGDINSRRGLVGELGERGNVKTISAQVPLANMFQYVSTLRSMSKGRANYSMKLANYDFVPQNVEDEL 384          
BLAST of mRNA_P-canaliculata_contig9844.23947.1 vs. uniprot
Match: A0A1Z5JSH0_FISSO (Elongation factor G, mitochondrial n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSH0_FISSO)

HSP 1 Score: 315 bits (808), Expect = 5.230e-100
Identity = 155/212 (73.11%), Postives = 183/212 (86.32%), Query Frame = 0
Query:    1 VAYREAITKPAEVDYTHKKQSGGSGQFARVKIKFEPSDMDEEGATADFTFESEIKGGTVPKEYIPG---GVESVLSNGVLAGFPVLGMKAILVDGAYHDVDSSVMAFEIAGRAAAREGLRKAGARLMEPVMQVDVITPEEYMGDVIGDINARRGQVVELTDRNGLKQVESTVPLANMFQYVSTLRSATKGRANYSMQLLKYDYVPQNVEKEV 209
            V+YREAIT+PAE+DYTHKKQSGGSGQ+AR+K+KFEP D++ E    DF F S+IKGG+VPKEYIPG   G+ESVL  GV+AG+P+LG+KA LVDGAYHDVDSSVMAFEIAGRAAAREGLRKA ARLMEP+MQVDV TPEEYMGD++GDINARRG V +L +R  +K + + VPLANMFQYVSTLRS +KGRANYSM+L  YD+VP N+E E+
Sbjct:  542 VSYREAITQPAEIDYTHKKQSGGSGQYARIKVKFEPKDLNSEDGNTDFEFISDIKGGSVPKEYIPGVQKGIESVLGTGVVAGYPILGLKATLVDGAYHDVDSSVMAFEIAGRAAAREGLRKAKARLMEPLMQVDVTTPEEYMGDILGDINARRGLVGDLGERGNVKTISARVPLANMFQYVSTLRSMSKGRANYSMKLASYDFVPPNIEDEL 753          
BLAST of mRNA_P-canaliculata_contig9844.23947.1 vs. uniprot
Match: A0A7S2U7T6_9STRA (Elongation factor G, mitochondrial n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7T6_9STRA)

HSP 1 Score: 313 bits (802), Expect = 8.740e-100
Identity = 162/226 (71.68%), Postives = 187/226 (82.74%), Query Frame = 0
Query:    1 VAYREAITKPAEVDYTHKKQSGGSGQFARVKIKFEPSDMDEEGATADFTFESEIKGGTVPKEYIPG---GVESVLSNGVLAGFPVLGMKAILVDGAYHDVDSSVMAFEIAGRAAAREGLRKAGARLMEPVMQVDVITPEEYMGDVIGDINARRGQVVELTDRNGLKQVESTVPLANMFQYVSTLRSATKGRANYSMQLLKYDYVPQNVEKEVVAKYGSGKKPVEDD 223
            V+YREAIT+ AE+DY HKKQSGGSGQ+ARVKI FEP +  EE    DF F+S+IKGG+VPKEYIPG   G+ESVL +GV+AG+PVLGMKA LVDGAYHDVDSSVMAFEIAGRAA REGLRKA ARLMEP+M+VD+ TPEEYMGDV+GDIN+RRGQV EL +R  +K + + VPLANMFQYVSTLRS +KGRANYSM+L  YD+VP NVE E+ A    G K  EDD
Sbjct:  474 VSYREAITQRAEIDYVHKKQSGGSGQYARVKIVFEPKEFSEEEGAMDFEFQSDIKGGSVPKEYIPGVAKGIESVLGSGVVAGYPVLGMKATLVDGAYHDVDSSVMAFEIAGRAATREGLRKAKARLMEPLMKVDITTPEEYMGDVLGDINSRRGQVDELGERGNIKTISALVPLANMFQYVSTLRSMSKGRANYSMKLANYDFVPPNVELELKA----GFKAAEDD 695          
BLAST of mRNA_P-canaliculata_contig9844.23947.1 vs. uniprot
Match: A0A7S2FQT5_9STRA (Elongation factor G, mitochondrial n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FQT5_9STRA)

HSP 1 Score: 311 bits (798), Expect = 1.180e-99
Identity = 164/226 (72.57%), Postives = 185/226 (81.86%), Query Frame = 0
Query:    1 VAYREAITKPAEVDYTHKKQSGGSGQFARVKIKFEPSDMDEEGATADFTFESEIKGGTVPKEYIPG---GVESVLSNGVLAGFPVLGMKAILVDGAYHDVDSSVMAFEIAGRAAAREGLRKAGARLMEPVMQVDVITPEEYMGDVIGDINARRGQVVELTDRNGLKQVESTVPLANMFQYVSTLRSATKGRANYSMQLLKYDYVPQNVEKEVVAKYGSGKKPVEDD 223
            VAYREAIT+ AE+DYTHKKQSGGSGQFAR+K+ FEP D  E    +DF F  EIKGG VPKEYIPG   G+ESVLS+G +AGFPVLGMKA L+DGAYHDVDSSVMAFEIAGR AAREGLRK G RLMEP+MQVDV TPEEYMGDVIGDI ARRG VVEL +R   K +E+ VPL NMFQYVS LRS +KGRANYSM+L KY+ VP NVEK++VA++   KK  ED+
Sbjct:  433 VAYREAITQKAEIDYTHKKQSGGSGQFARIKMIFEPKDTTE----SDFEFAEEIKGGVVPKEYIPGVQKGIESVLSSGPIAGFPVLGMKATLIDGAYHDVDSSVMAFEIAGRMAAREGLRKGGGRLMEPLMQVDVTTPEEYMGDVIGDITARRGMVVELGERGNTKTIEALVPLGNMFQYVSQLRSMSKGRANYSMKLAKYELVPPNVEKDIVAEF---KKADEDE 651          
BLAST of mRNA_P-canaliculata_contig9844.23947.1 vs. uniprot
Match: A0A7S3AYB0_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AYB0_9EUKA)

HSP 1 Score: 296 bits (759), Expect = 1.700e-98
Identity = 151/216 (69.91%), Postives = 183/216 (84.72%), Query Frame = 0
Query:    1 VAYREAITKPAEVDYTHKKQSGGSGQFARVKIKFEPSDMDEEGATADFTFESEIKGGTVPKEYIPG---GVESVLSNGVLAGFPVLGMKAILVDGAYHDVDSSVMAFEIAGRAAAREGLRKAGARLMEPVMQVDVITPEEYMGDVIGDINARRGQVVELTDRNGLKQVESTVPLANMFQYVSTLRSATKGRANYSMQLLKYDYVPQNVEKEVVAKY 213
            VAYREAIT+ A V+YTHKKQSGGSGQFA++ +KF P   D++ AT  F F+ EIKGGTVPKEYIPG   G+ES++ +G+LAGFPV+G KA L+DGAYHDVDSSVMAFEIAGR AAR+GLR+AGA+LMEP+M+V+VITPEE+MGDVIGDIN+RRG V EL +R  +K V + VPLANMFQYVS+LRSATKGRA+YSM L  Y+ VP NV KE+++KY
Sbjct:   58 VAYREAITREATVEYTHKKQSGGSGQFAKIVVKFAPLTDDDDAATG-FLFDQEIKGGTVPKEYIPGVAKGLESIMGSGILAGFPVIGCKATLMDGAYHDVDSSVMAFEIAGRGAARKGLREAGAQLMEPMMKVEVITPEEHMGDVIGDINSRRGMVGELGERGNMKVVRAQVPLANMFQYVSSLRSATKGRASYSMNLDSYELVPPNVAKELLSKY 272          
BLAST of mRNA_P-canaliculata_contig9844.23947.1 vs. uniprot
Match: A0A7S2IC57_9STRA (Elongation factor G, mitochondrial n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2IC57_9STRA)

HSP 1 Score: 312 bits (799), Expect = 1.780e-98
Identity = 159/212 (75.00%), Postives = 184/212 (86.79%), Query Frame = 0
Query:    1 VAYREAITKPAEVDYTHKKQSGGSGQFARVKIKFEPSDMDEEGATADFTFESEIKGGTVPKEYIPG---GVESVLSNGVLAGFPVLGMKAILVDGAYHDVDSSVMAFEIAGRAAAREGLRKAGARLMEPVMQVDVITPEEYMGDVIGDINARRGQVVELTDRNGLKQVESTVPLANMFQYVSTLRSATKGRANYSMQLLKYDYVPQNVEKEV 209
            V+YREAIT+ AEVDYTHKKQSGGSGQ+ARVKI+FEP D  +E A  DF FE++IKGG+VPKEYIPG   G+ESVL +GV+AGFPVLGMKA L+DGAYHDVDSSVMAFEIAGRAAAREGLRKA ARLMEP+MQVDV TPEEYMGD++GDIN RRG V EL +R  +K +++ VPLANMFQYVSTLRS +KGRANYSM+L  YD+VP N+E E+
Sbjct:  564 VSYREAITQAAEVDYTHKKQSGGSGQYARVKIQFEPKDFSDE-ADMDFEFEADIKGGSVPKEYIPGVQKGIESVLGSGVVAGFPVLGMKAKLIDGAYHDVDSSVMAFEIAGRAAAREGLRKAKARLMEPMMQVDVTTPEEYMGDILGDINGRRGLVGELGERGNVKTIQAQVPLANMFQYVSTLRSMSKGRANYSMKLADYDFVPPNIEDEL 774          
BLAST of mRNA_P-canaliculata_contig9844.23947.1 vs. uniprot
Match: A0A7S2R190_9STRA (Elongation factor G, mitochondrial n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R190_9STRA)

HSP 1 Score: 311 bits (797), Expect = 3.450e-98
Identity = 156/221 (70.59%), Postives = 185/221 (83.71%), Query Frame = 0
Query:    1 VAYREAITKPAEVDYTHKKQSGGSGQFARVKIKFEPSDMDEEGATADFTFESEIKGGTVPKEYIPG---GVESVLSNGVLAGFPVLGMKAILVDGAYHDVDSSVMAFEIAGRAAAREGLRKAGARLMEPVMQVDVITPEEYMGDVIGDINARRGQVVELTDRNGLKQVESTVPLANMFQYVSTLRSATKGRANYSMQLLKYDYVPQNVEKEVVAKYGSGKK 218
            V+YREAIT+ AE+DY HKKQSGGSGQ+ARVKI+FEP +M EE    DF F S+IKGG+VP+EYIPG   G+ESVL +GV+AG+PVLGMKA LVDGAYHDVDSSVMAFEIAGRAA REGLRKA ARLMEP+M+VDV TPEEYMGD++GD+NARRG V EL +R  +K + + VPLANMFQYVSTLRS +KGRANYSM+L  YD+VP NVE+E+   +   K+
Sbjct:  562 VSYREAITQAAEIDYVHKKQSGGSGQYARVKIQFEPKEMSEEEGAMDFEFTSDIKGGSVPREYIPGVQKGIESVLGSGVVAGYPVLGMKATLVDGAYHDVDSSVMAFEIAGRAACREGLRKAKARLMEPLMKVDVTTPEEYMGDILGDVNARRGLVGELGERGNIKTISALVPLANMFQYVSTLRSMSKGRANYSMKLANYDFVPPNVEEELKKGFAGEKE 782          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9844.23947.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFY4_ECTSI5.510e-12786.73Elongation factor G, mitochondrial n=2 Tax=Ectocar... [more]
A0A836CHR4_9STRA1.090e-10976.55Elongation factor G, mitochondrial n=1 Tax=Tribone... [more]
A0A7S1GRX9_CYCTE2.050e-10272.64Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S3LBD3_9STRA5.840e-10172.64Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A1Z5JSH0_FISSO5.230e-10073.11Elongation factor G, mitochondrial n=2 Tax=Fistuli... [more]
A0A7S2U7T6_9STRA8.740e-10071.68Elongation factor G, mitochondrial n=1 Tax=Attheya... [more]
A0A7S2FQT5_9STRA1.180e-9972.57Elongation factor G, mitochondrial n=1 Tax=Florenc... [more]
A0A7S3AYB0_9EUKA1.700e-9869.91Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S2IC57_9STRA1.780e-9875.00Elongation factor G, mitochondrial n=4 Tax=Lithode... [more]
A0A7S2R190_9STRA3.450e-9870.59Elongation factor G, mitochondrial n=1 Tax=Eucampi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005517Translation elongation factor EFG/EF2, domain IVSMARTSM00889EFG_IV_2coord: 1..120
e-value: 8.7E-53
score: 191.4
IPR005517Translation elongation factor EFG/EF2, domain IVPFAMPF03764EFG_IVcoord: 1..119
e-value: 5.6E-36
score: 123.0
IPR000640Elongation factor EFG, domain V-likeSMARTSM00838EFG_C_acoord: 122..209
e-value: 1.7E-41
score: 153.8
IPR000640Elongation factor EFG, domain V-likePFAMPF00679EFG_Ccoord: 122..208
e-value: 2.4E-26
score: 91.6
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 4..209
e-value: 2.3E-75
score: 254.5
NoneNo IPR availableGENE3D3.30.70.240coord: 126..196
e-value: 2.3E-75
score: 254.5
NoneNo IPR availablePANTHERPTHR43261FAMILY NOT NAMEDcoord: 1..212
NoneNo IPR availablePANTHERPTHR43261:SF6coord: 1..212
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 2..120
IPR035647EF-G domain III/V-likeSUPERFAMILY54980EF-G C-terminal domain-likecoord: 125..212

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9844contigP-canaliculata_contig9844:7943..11810 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9844.23947.1mRNA_P-canaliculata_contig9844.23947.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9844 7943..11810 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9844.23947.1 ID=prot_P-canaliculata_contig9844.23947.1|Name=mRNA_P-canaliculata_contig9844.23947.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=224bp
VAYREAITKPAEVDYTHKKQSGGSGQFARVKIKFEPSDMDEEGATADFTF
ESEIKGGTVPKEYIPGGVESVLSNGVLAGFPVLGMKAILVDGAYHDVDSS
VMAFEIAGRAAAREGLRKAGARLMEPVMQVDVITPEEYMGDVIGDINARR
GQVVELTDRNGLKQVESTVPLANMFQYVSTLRSATKGRANYSMQLLKYDY
VPQNVEKEVVAKYGSGKKPVEDD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005517Transl_elong_EFG/EF2_IV
IPR000640EFG_V-like
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR020568Ribosomal_S5_D2-typ_fold
IPR035647EFG_III/V