Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig984.23942.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
| Match Name | E-value | Identity | Description | |
|---|
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 284..327 |
| None | No IPR available | COILS | Coil | Coil | coord: 217..265 |
| None | No IPR available | SUPERFAMILY | 57850 | RING/U-box | coord: 87..148 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 77..191
e-value: 2.2E-8
score: 35.8 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-canaliculata_contig984.23942.1 ID=prot_P-canaliculata_contig984.23942.1|Name=mRNA_P-canaliculata_contig984.23942.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=667bp
MEGTGKGKGKFTGTGLCDSGYSVASSSGGEGGGSSSSGVGSKGNESDGVG
RRGNWLDKIGHVGWEPGEGIVINGDRVVSVGNEKNMVRLVECTICKEALV
EQDTDPCVRAPCCKAIAHKSCVEEWLRRESRCFVCPHIINTRNGRAAYFA
NKLSADDIAAESTQEIERKIADPGDLKEEFQRAREKFLQEKQRPYDEAFG
EFLAKEISGGEGVADIMSQQEKALAEIRANLQESLAADEAFARKLEEEER
EREAAAALRASEKTEFRANLQGSLAADEAFARKLEEEEREREAAAALRAR
REVEKSERAARELAEMFEREAAEEEKRAAAEVTLETNKERESEGECERLE
KSGERGSKLRRASPKGARFQGDRGSCSSGEGNVVKRPERMAQGHGASPSN
RARGSVGDVSGRAVKSKGVGSRQSDWRDGREGSSESGDRRAGERGRGGGR
LKSGGGRPAPSKHSENCSDFDEEEEEEDEEDVDDEWVEAKETRGSSPHSS
KKRRFSNCGGRSNTNTCTSVPFRSNRTSPGGKRGGDINDVTSGARRQGAG
ADAEVCAGADAGAGTGGRGKNEIPAASSQRRAARHPSPTGGRAGIAKSGG
GEDGVDGGYQRPVSLDHAMDDAAPGDAKDPLRDSLKRATNNTRVFRAAAD
AEDALAPGRQLEASDAR back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR013083 | Znf_RING/FYVE/PHD |
|