prot_P-canaliculata_contig984.23941.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig984.23941.1
Unique Nameprot_P-canaliculata_contig984.23941.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length156
Homology
BLAST of mRNA_P-canaliculata_contig984.23941.1 vs. uniprot
Match: D8LG48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG48_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 3.290e-67
Identity = 110/161 (68.32%), Postives = 128/161 (79.50%), Query Frame = 0
Query:    1 MLGAVFNKKRSVDGAADASMAIEPMVGGLLIGMTTMMCFLSLMTAIYWGEMSGCEDTDDDVTGYSCISASGMAAVSWFASFLLVAQVVLLVVLIMWKDDIFFVEGGYDNFDAQEDRAAYSSSAYAYDGATFGTGXXXXXXXXXX------DAGPAPQQADL 155
            +L  VFN+KR+ DG  D +MAIEP+VGG LIG+TTMMCFLSLMTA+YWG+MSGCED  DDV GYSC ++ GMAAV+WFASFLL+++ V L  LI+WK+D+FFV+GGYDNFDAQEDR AYSSSAYAYDGATFGTG      XXXX      D    PQQADL
Sbjct:   63 LLAVVFNRKRATDGGMDTAMAIEPIVGGGLIGITTMMCFLSLMTAVYWGQMSGCEDDTDDVDGYSCYNSFGMAAVAWFASFLLISEAVTLAALILWKEDMFFVDGGYDNFDAQEDRGAYSSSAYAYDGATFGTGGMGGGLXXXXXXXXNGDDDGVPQQADL 223          
BLAST of mRNA_P-canaliculata_contig984.23941.1 vs. uniprot
Match: A0A7S1TNM9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TNM9_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 4.850e-15
Identity = 41/110 (37.27%), Postives = 62/110 (56.36%), Query Frame = 0
Query:   28 GLLIGMTTMMCFLSLMTAIYWGEMSGCEDTDDDVTGYSCISASGMAAVSWFASFLLVAQVVLLVVLIMWKDDIFFVEGGYDN------FDAQEDRAAYSSSAYAYDGATF 131
            G +IG++TMM FL LMTA++WG++SGCED  DD   YSC +     A    +  L +  V   ++L++W+DD      GYD+      F      AA +++  AYD +T+
Sbjct:   72 GFVIGVSTMMSFLMLMTAVFWGQLSGCEDVKDDPDQYSCDNKKAYGATCAMSVLLFLLDVSFTILLVLWRDDFMSESSGYDDIGGNSAFVNNAPGAADANAYAAYDSSTY 181          
BLAST of mRNA_P-canaliculata_contig984.23941.1 vs. uniprot
Match: A0A7R9YCB5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCB5_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 2.820e-13
Identity = 36/108 (33.33%), Postives = 58/108 (53.70%), Query Frame = 0
Query:   28 GLLIGMTTMMCFLSLMTAIYWGEMSGCEDTDDDVTGYSCISASGMAAVSWFASFLLVAQVVLLVVLIMWKDDIFFVEGGYDNFDAQ----EDRAAYSSSAYAYDGATF 131
            G +IG+ TMM  L  MTAI+WG++SGCE  D+DV  Y+C +     A   F+  L +      ++L++W+DD       Y++  +     +   A  +S  AYD +T+
Sbjct:   26 GFVIGVATMMSLLMFMTAIFWGQLSGCEKVDEDVDQYTCDNKKAYGATCAFSVLLFLLDTAFTILLVLWRDDFMGETAAYEDIGSSPFVNDQPGAEGNSYAAYDSSTY 133          
BLAST of mRNA_P-canaliculata_contig984.23941.1 vs. uniprot
Match: A0A7R9U994_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U994_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.200e-12
Identity = 36/108 (33.33%), Postives = 58/108 (53.70%), Query Frame = 0
Query:   28 GLLIGMTTMMCFLSLMTAIYWGEMSGCEDTDDDVTGYSCISASGMAAVSWFASFLLVAQVVLLVVLIMWKDDIFFVEGGYDNFDAQ----EDRAAYSSSAYAYDGATF 131
            G +IG+ TMM  L  MTAI+WG++SGCE  D+DV  Y+C +     A   F+  L +      ++L++W+DD       Y++  +     +   A  +S  AYD +T+
Sbjct:   99 GFVIGVATMMSLLMFMTAIFWGQLSGCEKVDEDVDQYTCDNKKAYGATCAFSVLLFLLDTAFTILLVLWRDDFMGETAAYEDIGSSPFVNDQPGAEGNSYAAYDSSTY 206          
BLAST of mRNA_P-canaliculata_contig984.23941.1 vs. uniprot
Match: W7TS32_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS32_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 4.010e-12
Identity = 40/110 (36.36%), Postives = 60/110 (54.55%), Query Frame = 0
Query:   24 PMVGGLLIGMTTMMCFLSLMTAIYWGEMSGCEDTDDDVTGYSCISASGMAAVSWFASFLLVAQVVLLVVLIMWKDDIFFVEGGYDNFDAQEDRAAYSSSAYAYDGATFGT 133
            P+  G ++G++ M+ FLSLMTAI+WG+++ C     D+  YSC + S  +A   FA+ L + Q+V    L++W+D+       YD  D      A SSSA    G   GT
Sbjct:   68 PLAVGFVLGVSVMITFLSLMTAIFWGQLANCSPGYYDIKRYSCTNRSAYSATCAFATLLFLVQLVFTSALVLWRDEFIQDSSAYD--DIHGAGGASSSSAAGLPGYEGGT 175          
BLAST of mRNA_P-canaliculata_contig984.23941.1 vs. uniprot
Match: D7FPE0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPE0_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 6.910e-8
Identity = 34/90 (37.78%), Postives = 55/90 (61.11%), Query Frame = 0
Query:   28 GLLIGMTTMMCFLSLMTAIYWGEMSGCE-DTDDDVTGYSCISASGMAAVSWFASFLLVAQVVLLVVLI-----MWKDDIFFVEGGYDNFD 111
            G LIG+T ++  ++LMTAIYWG+++GC+ D D D   YSC + S M  V+ FAS + V Q+  + +L+     + ++D     G Y ++D
Sbjct:   89 GFLIGVTLVLNVITLMTAIYWGQLAGCDSDYDGDYDQYSCSNKSAMRGVAAFASIIWVLQLPFIYLLVQRRGVLTREDYATSGGRYADYD 178          
BLAST of mRNA_P-canaliculata_contig984.23941.1 vs. uniprot
Match: A0A7S2S6Q8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S6Q8_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 2.220e-7
Identity = 29/72 (40.28%), Postives = 44/72 (61.11%), Query Frame = 0
Query:   28 GLLIGMTTMMCFLSLMTAIYWGEMSGCEDTDDDVTGYSCISASGMAAVSWFASFLLVAQVVLLVVLIMWKDD 99
            G L+G++    +LSL TAI+WG+++ C+     ++ YSC + S   AV  FA+ L + Q  L  VL +WKDD
Sbjct:   83 GFLLGLSGATAWLSLQTAIFWGQLADCDRHAHHLSQYSCSNVSAYKAVCAFAALLFILQGGLFAVLAVWKDD 154          
BLAST of mRNA_P-canaliculata_contig984.23941.1 vs. uniprot
Match: A0A7S2KR05_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KR05_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 4.910e-5
Identity = 32/104 (30.77%), Postives = 54/104 (51.92%), Query Frame = 0
Query:   24 PMVGGLLIGMTTMMCFLSLMTAIYWGEMSGCEDTDDDVT--GYSCISASGMAAVSWFASFLLVAQVVLLVVLIMWKDDIFFVEGGYDNFDAQEDRAAYSSSAYA 125
            P+  G+ IG +  M  L L+TA+YWGEMSGCE   +  T   Y C   + M   +  A+ L + ++VL  VL++ +    ++  GY ++  +     Y+ +  A
Sbjct:  108 PIAYGIWIGTSLTMTVLYLITAVYWGEMSGCEKLPEGTTIDQYECDDKNAMECAAGIATLLFLTEIVLTGVLVVRQP---YLLRGYPSYIDESTELTYNDNISA 208          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig984.23941.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LG48_ECTSI3.290e-6768.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1TNM9_9STRA4.850e-1537.27Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9YCB5_9STRA2.820e-1333.33Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7R9U994_9STRA1.200e-1233.33Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
W7TS32_9STRA4.010e-1236.36Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
D7FPE0_ECTSI6.910e-837.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2S6Q8_9STRA2.220e-740.28Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2KR05_9STRA4.910e-530.77Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..28
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 97..155
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..49
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 50..68
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..96
NoneNo IPR availableTMHMMTMhelixcoord: 74..96
NoneNo IPR availableTMHMMTMhelixcoord: 26..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig984contigP-canaliculata_contig984:8329..10768 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig984.23941.1mRNA_P-canaliculata_contig984.23941.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig984 8218..12303 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig984.23941.1 ID=prot_P-canaliculata_contig984.23941.1|Name=mRNA_P-canaliculata_contig984.23941.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=156bp
MLGAVFNKKRSVDGAADASMAIEPMVGGLLIGMTTMMCFLSLMTAIYWGE
MSGCEDTDDDVTGYSCISASGMAAVSWFASFLLVAQVVLLVVLIMWKDDI
FFVEGGYDNFDAQEDRAAYSSSAYAYDGATFGTGGMGDGGLGAGDAGPAP
QQADL*
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