prot_P-canaliculata_contig9773.23874.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9773.23874.1
Unique Nameprot_P-canaliculata_contig9773.23874.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length464
Homology
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BLAST of mRNA_P-canaliculata_contig9773.23874.1 vs. uniprot
Match: D7G585_ECTSI (MCU domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G585_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 1.570e-38
Identity = 129/325 (39.69%), Postives = 179/325 (55.08%), Query Frame = 0 
Query:  122 RDEMCLRARKIVRQETAETGAELDALSAQVEKLKRAMKDEHSYRKAAERRCRQARDTSSRISRYLDNILRVNEELVMRRTKTSIPPRSAGQ---RSTPTQERGGQDKPERANGPKNSPLGRRECGTLGELHLGAAVEDALRAGRARGDPIPFLEALYERIGFSVMQRE-GEASGTHSLPTSPSRDXXXXXXXXXXXXXXXXQDEREGPYNVKIVVSGGDDGFFLREGMDRNLLAGAQSASRLKET----KRTVRG--EDGVGNRIREGRSPSKPGYSFARSPHRRAVSSAERSPMMLRRLEDLVTQLKRERVDVEQGYKTVVQRA 436
            R + C RARK  R+ETA   ++L +L+ ++EKL+R + DE + R++AE +  +A+ T+ RISRYLD+IL VN+ELV   T +S+ P +AGQ   R+    +R    +   A   +N  L   + G    + + AAV++A   GR  GDP+P L ALYERIGFS MQ E G   GT SLPTSP R                  D+ E     ++V      GFF  +  D  +L  ++  +   +      R+  G    G GN    G   +K GYSFA SP  R  S+AERSP +++RLE L +QL+RER DVEQ YK VV R+
Sbjct:    9 RKDRCSRARKTARRETAAADSQLTSLARRLEKLQRTLDDERASRQSAELKHHRAKSTTIRISRYLDSILNVNQELVAAGTSSSLTP-TAGQPVPRALGELQRKQSIRDSYATPRRNPAL--EDDG----IDIRAAVKEAYCVGRTGGDPVPSLTALYERIGFSAMQGEDGHHGGTPSLPTSPRR---ARVGNTAEAYRFRDVDDGEDYGRQRLVEPTAVGGFFAED--DAEVLESSRRQASAHQVDDGGSRSANGGKHHGTGNAFVGGGVTAK-GYSFANSPLVRPTSAAERSPEVMKRLEALASQLERERSDVEQWYKDVVHRS 320
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9773.23874.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G585_ECTSI1.570e-3839.69MCU domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 408..428
NoneNo IPR availableCOILSCoilCoilcoord: 137..157
NoneNo IPR availableCOILSCoilCoilcoord: 68..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9773contigP-canaliculata_contig9773:4633..6855 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9773.23874.1mRNA_P-canaliculata_contig9773.23874.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9773 4633..6855 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9773.23874.1 ID=prot_P-canaliculata_contig9773.23874.1|Name=mRNA_P-canaliculata_contig9773.23874.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=464bp
ERRQSIDEVHSLRTDLARRHEDLKYTQEVQTLTEQDQANAVRLSHEQLLA
DKRRVDLRLEETEASEIIQDLKKTCKNARDRAQDAHVSQWAAEAKLSVLD
RRIEGIEKRARIFLYAFFVRTRDEMCLRARKIVRQETAETGAELDALSAQ
VEKLKRAMKDEHSYRKAAERRCRQARDTSSRISRYLDNILRVNEELVMRR
TKTSIPPRSAGQRSTPTQERGGQDKPERANGPKNSPLGRRECGTLGELHL
GAAVEDALRAGRARGDPIPFLEALYERIGFSVMQREGEASGTHSLPTSPS
RDRERDRGREKDRERARSQDEREGPYNVKIVVSGGDDGFFLREGMDRNLL
AGAQSASRLKETKRTVRGEDGVGNRIREGRSPSKPGYSFARSPHRRAVSS
AERSPMMLRRLEDLVTQLKRERVDVEQGYKTVVQRASSSAYWSVEGPDLN
FRNLTRAIACLQVK
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