prot_P-canaliculata_contig97677.23869.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig97677.23869.1
Unique Nameprot_P-canaliculata_contig97677.23869.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length52
Homology
BLAST of mRNA_P-canaliculata_contig97677.23869.1 vs. uniprot
Match: A0A5D0S9C0_9RHOB (Type I secretion C-terminal target domain-containing protein n=1 Tax=Oceaniovalibus sp. ACAM 378 TaxID=2599923 RepID=A0A5D0S9C0_9RHOB)

HSP 1 Score: 63.9 bits (154), Expect = 1.430e-10
Identity = 29/45 (64.44%), Postives = 33/45 (73.33%), Query Frame = 0
Query:    1 HPVVIEIELDGFSESFLKQYEHADWQPPKVNNTDYDYGYPSGQSS 45
            HPVVI IEL  F ESFLKQYE  D+QPPK+ N DYD G+ SG  +
Sbjct:  709 HPVVINIELREFEESFLKQYEMTDFQPPKIGNPDYDLGFGSGSDN 753          
BLAST of mRNA_P-canaliculata_contig97677.23869.1 vs. uniprot
Match: UPI000BAAEF76 (type I secretion C-terminal target domain-containing protein n=1 Tax=Actibacterium ureilyticum TaxID=1590614 RepID=UPI000BAAEF76)

HSP 1 Score: 60.5 bits (145), Expect = 2.390e-9
Identity = 23/39 (58.97%), Postives = 31/39 (79.49%), Query Frame = 0
Query:    1 HPVVIEIELDGFSESFLKQYEHADWQPPKVNNTDYDYGY 39
            HPV+IEI++  F ESFLKQYE  DW  P++NN D+D+G+
Sbjct:  735 HPVIIEIDVSAFDESFLKQYELTDWTEPQINNPDFDFGF 773          
BLAST of mRNA_P-canaliculata_contig97677.23869.1 vs. uniprot
Match: A0A017H859_9RHOB (G8 domain-containing protein n=2 Tax=Limimaricola hongkongensis TaxID=278132 RepID=A0A017H859_9RHOB)

HSP 1 Score: 54.3 bits (129), Expect = 3.570e-7
Identity = 23/35 (65.71%), Postives = 26/35 (74.29%), Query Frame = 0
Query:    1 HPVVIEIELDGFSESFLKQYEHADWQPPKVNNTDY 35
            HPVVIEIEL+GF  S+LK YE   W PP +NNT Y
Sbjct:  718 HPVVIEIELEGFETSYLKGYEMPGWTPPAINNTGY 752          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig97677.23869.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A5D0S9C0_9RHOB1.430e-1064.44Type I secretion C-terminal target domain-containi... [more]
UPI000BAAEF762.390e-958.97type I secretion C-terminal target domain-containi... [more]
A0A017H859_9RHOB3.570e-765.71G8 domain-containing protein n=2 Tax=Limimaricola ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig97677contigP-canaliculata_contig97677:116..271 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig97677.23869.1mRNA_P-canaliculata_contig97677.23869.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig97677 116..271 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig97677.23869.1 ID=prot_P-canaliculata_contig97677.23869.1|Name=mRNA_P-canaliculata_contig97677.23869.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=52bp
HPVVIEIELDGFSESFLKQYEHADWQPPKVNNTDYDYGYPSGQSSSPVVE
EP
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